FFCP PHASE1:Hg19::chr6:99280819..99280823,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:99280819..99280823,+
|short_description=p@chr6:99280819..99280823,+
|description=CAGE_peak_at_chr6:99280819..99280823,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:99280819..99280823,+ | |||
|description=CAGE_peak_at_chr6:99280819..99280823,+ | |||
|id=chr6:99280819..99280823,+ | |||
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|ontology_enrichment_celltype_v019_2=CL:0002319,3.30e-15,25;CL:0000128,4.07e-15,7;CL:0000126,4.07e-15,7;CL:0000127,4.07e-15,7;CL:0002453,4.07e-15,7;CL:0000047,1.51e-13,8;CL:0002605,1.54e-09,3;CL:0000133,5.88e-07,59;CL:0000243,8.84e-07,15;CL:0000125,8.84e-07,15;CL:0000030,8.84e-07,15;CL:0000339,8.84e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.47e-09;3!UBERON:0003057;1.47e-09;3!CL:0000133;1.10e-07;59!CL:0000339;9.10e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr6:99280819..99280823,+ | |||
}} | }} |
Latest revision as of 03:56, 31 July 2015
Short description: | p@chr6:99280819..99280823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:99280819..99280823, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.30e-15 | 25 |
oligodendrocyte | 4.07e-15 | 7 |
macroglial cell | 4.07e-15 | 7 |
astrocyte | 4.07e-15 | 7 |
oligodendrocyte precursor cell | 4.07e-15 | 7 |
neuronal stem cell | 1.51e-13 | 8 |
astrocyte of the cerebral cortex | 1.54e-09 | 3 |
neurectodermal cell | 5.88e-07 | 59 |
glial cell (sensu Vertebrata) | 8.84e-07 | 15 |
glial cell | 8.84e-07 | 15 |
glioblast | 8.84e-07 | 15 |
glioblast (sensu Vertebrata) | 8.84e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.34e-20 | 5 |
central nervous system | 4.48e-19 | 81 |
nervous system | 3.23e-17 | 89 |
cerebral cortex | 1.47e-15 | 25 |
pallium | 1.47e-15 | 25 |
regional part of telencephalon | 2.32e-12 | 32 |
cerebral hemisphere | 2.32e-12 | 32 |
brain grey matter | 1.11e-11 | 34 |
gray matter | 1.11e-11 | 34 |
telencephalon | 1.11e-11 | 34 |
neocortex | 3.22e-11 | 20 |
neural tube | 4.62e-11 | 56 |
neural rod | 4.62e-11 | 56 |
future spinal cord | 4.62e-11 | 56 |
neural keel | 4.62e-11 | 56 |
regional part of cerebral cortex | 2.66e-10 | 22 |
regional part of forebrain | 8.31e-10 | 41 |
forebrain | 8.31e-10 | 41 |
anterior neural tube | 8.31e-10 | 41 |
future forebrain | 8.31e-10 | 41 |
spinal cord | 1.19e-09 | 3 |
dorsal region element | 1.19e-09 | 3 |
dorsum | 1.19e-09 | 3 |
ectoderm-derived structure | 4.33e-09 | 171 |
ectoderm | 4.33e-09 | 171 |
presumptive ectoderm | 4.33e-09 | 171 |
brain | 4.86e-09 | 68 |
future brain | 4.86e-09 | 68 |
regional part of nervous system | 1.03e-07 | 53 |
regional part of brain | 1.03e-07 | 53 |
neural plate | 1.17e-07 | 82 |
presumptive neural plate | 1.17e-07 | 82 |
neurectoderm | 2.60e-07 | 86 |
organ system subdivision | 6.23e-07 | 223 |
pre-chordal neural plate | 9.21e-07 | 61 |