FFCP PHASE1:Hg19::chr10:129858129..129858150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:129858129..129858150,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:129858129..129858150,+ | |||
|id=chr10:129858129..129858150,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.01e-46!140;CL:0000037!1.51e-44!172;CL:0000566!1.51e-44!172;CL:0002032!5.97e-41!165;CL:0000837!5.97e-41!165;CL:0002087!9.78e-40!119;CL:0000988!3.67e-39!182;CL:0002031!7.57e-38!124;CL:0000766!5.30e-35!76;CL:0000763!7.07e-30!112;CL:0000049!7.07e-30!112;CL:0002194!3.05e-29!63;CL:0000576!3.05e-29!63;CL:0000040!3.05e-29!63;CL:0000559!3.05e-29!63;CL:0000557!3.40e-29!71;CL:0000839!4.68e-29!70;CL:0002009!8.10e-29!65;CL:0002057!3.00e-28!42;CL:0000860!1.18e-25!45;CL:0000542!5.90e-10!53;CL:0000051!5.90e-10!53;CL:0000838!7.78e-10!52;CL:0002393!1.83e-07!9;CL:0002397!1.83e-07!9;CL:0000791!4.32e-07!18;CL:0000789!4.32e-07!18;CL:0002420!4.32e-07!18;CL:0002419!4.32e-07!18;CL:0000790!4.32e-07!18;CL:0000084!5.27e-07!25;CL:0000827!5.27e-07!25;CL:0000094!5.62e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.74e-28;33!CL:0002057;7.74e-28;33!CL:0000473;5.53e-25;39!CL:0000234;5.53e-25;39!CL:0000576;1.29e-23;48!CL:0000766;3.45e-20;69!CL:0002087;2.83e-12;104!CL:0000763;8.47e-12;100!CL:0000738;2.57e-11;136!CL:0000094;3.86e-09;8!CL:0000988;8.41e-08;177!CL:0002393;2.51e-07;6!CL:0002397;2.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.49e-50,136;CL:0000766,9.00e-49,72;CL:0000037,9.76e-47,168;CL:0002032,6.88e-43,161;CL:0000837,6.88e-43,161;CL:0002087,7.77e-43,115;CL:0000988,3.99e-42,177;CL:0002031,5.47e-41,120;CL:0000557,6.48e-41,67;CL:0000473,8.13e-41,48;CL:0000234,8.13e-41,48;CL:0002194,2.61e-40,59;CL:0000576,2.61e-40,59;CL:0000040,2.61e-40,59;CL:0000559,2.61e-40,59;CL:0002009,4.38e-40,61;CL:0000860,6.88e-39,42;CL:0002057,6.88e-39,42;CL:0000839,7.06e-39,66;CL:0000763,1.07e-37,108;CL:0000049,1.07e-37,108;CL:0002393,8.25e-10,9;CL:0002397,8.25e-10,9;CL:0000094,3.94e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-28;42!CL:0000049;8.60e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.35e-31!112;UBERON:0002390!4.74e-31!102;UBERON:0003061!4.74e-31!102;UBERON:0002371!4.05e-25!80;UBERON:0001474!9.08e-21!86;UBERON:0002405!2.50e-18!115;UBERON:0007023!2.37e-16!115;UBERON:0004765!1.45e-15!101;UBERON:0001434!1.45e-15!101;UBERON:0001049!1.12e-12!57;UBERON:0005068!1.12e-12!57;UBERON:0006241!1.12e-12!57;UBERON:0007135!1.12e-12!57;UBERON:0002780!1.73e-11!41;UBERON:0001890!1.73e-11!41;UBERON:0006240!1.73e-11!41;UBERON:0003080!8.13e-11!42;UBERON:0002020!5.03e-10!34;UBERON:0003528!5.03e-10!34;UBERON:0002616!5.57e-10!59;UBERON:0001893!6.35e-10!34;UBERON:0002791!1.15e-09!33;UBERON:0001869!3.23e-09!32;UBERON:0000955!6.37e-09!69;UBERON:0006238!6.37e-09!69;UBERON:0002619!9.93e-08!22;UBERON:0001017!1.12e-07!82;UBERON:0003075!1.36e-07!86;UBERON:0007284!1.36e-07!86;UBERON:0000956!3.33e-07!25;UBERON:0000203!3.33e-07!25;UBERON:0005743!6.83e-07!86;UBERON:0001950!6.98e-07!20;UBERON:0002346!7.43e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.28e-08;34!UBERON:0002020;6.28e-08;34!UBERON:0002780;7.36e-08;41!UBERON:0001890;7.36e-08;41!UBERON:0001893;9.10e-08;34!UBERON:0002791;1.27e-07;32!UBERON:0000073;1.27e-07;53!UBERON:0002616;1.27e-07;53!UBERON:0001869;1.54e-07;32!UBERON:0002619;3.99e-07;22!UBERON:0000178;5.79e-07;15!UBERON:0000179;5.79e-07;15!UBERON:0000463;5.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.38e-42,98;UBERON:0003061,7.38e-42,98;UBERON:0002193,1.42e-40,108;UBERON:0002371,2.13e-35,76;UBERON:0002405,3.19e-34,93;UBERON:0001474,5.90e-31,82;UBERON:0004765,6.64e-27,90;UBERON:0001434,8.62e-23,100;UBERON:0001049,1.21e-12,56;UBERON:0005068,1.21e-12,56;UBERON:0006241,1.21e-12,56;UBERON:0007135,1.21e-12,56;UBERON:0000073,3.84e-12,53;UBERON:0002616,3.84e-12,53;UBERON:0003081,9.71e-12,203;UBERON:0007023,2.62e-11,114;UBERON:0002780,8.98e-10,41;UBERON:0001890,8.98e-10,41;UBERON:0003080,8.98e-10,41;UBERON:0006240,8.98e-10,41;UBERON:0003528,2.40e-09,34;UBERON:0002020,2.40e-09,34;UBERON:0001893,3.13e-09,34;UBERON:0002791,1.99e-08,32;UBERON:0001869,2.47e-08,32;UBERON:0003075,2.33e-07,82;UBERON:0007284,2.33e-07,82;UBERON:0000955,2.34e-07,68;UBERON:0006238,2.34e-07,68;UBERON:0002619,3.55e-07,22;UBERON:0000178,6.40e-07,15;UBERON:0000179,6.40e-07,15;UBERON:0000463,6.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,1.68109492645493,1.47781061009902,1.49550484495991,11.0141997517693,8.82807615623589,14.3978994683951,0,0,0,3.02122082263176,0.853015394924529,2.64240395401362,29.3617566521895,128.749535275831,83.549185225603,0.895661896959697,1.94336199611388,1.28787783817093,23.8453111598486,15.1150377475524,9.46077838632483,26.496910207248,33.3045989297679,26.3250415260838,44.016936025289,19.9805351092698,12.7700404139836,27.5796544589295,16.7826017731795,13.5426486594342,37.2719832294357,19.1034305040492,6.96642801779762,16.8346140803996,8.34415470397843,22.3767994029664,3.62836430205388,19.9463657621632,12.3605177654481,51.9474537145165,17.0215567407342,11.8336227309159,79.1433295558741,83.4372669472322,16.723541042294,16.345786571101,6.2607198117886,3.48108626184973,21.9705497764419,37.8435653937778,17.4016675771952,74.4738824501263,65.6273021717383,126.491036730602,10.8304842621674,22.079751169099,11.1425133796427,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,4.55370375287559,8.80855784056408,3.05818582500183,1.32171328579026,6.72610275577843,2.63384084775077,8.26181034478099,18.8645166119599,6.99045096598331,3.00935691703221,5.21475626613745,4.73447805734733,0,1.11410456885174,2.06224135232386,3.98761010250518,6.49929273036037,4.22701355094728,4.42201781703586,7.23526780256175,3.31620021343018,2.60822777161547,3.85545064221357,1.87278579662799,7.31748666634838,2.26618685395132,6.51474839123266,2.06176467289578,8.6026695286631,1.91139248594458,0.651083453856419,0.950452044448374,1.05402583354441,1.53583933385302,2.49861453104692,0.473554504088034,0.821127996921047,15.5237192283044,43.5927519127117,29.544178392091,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0.0945348171640679,0.886917589850256,1.05401742831751,0.982343066232845,0.364295288292542,0.370784442784429,4.54366351116557,5.92041106817509,12.6310062492922,15.2633999555419,6.29194401858141,5.20040501861391,0.198762407366705,0,0.347140501607594,0,0,1.6507082516404,0,0.775250277507987,0.35576626268671,3.3472061276467,0,0,3.1728067481262,0.367663080345869,0.81014194788176,0.714397826272638,0.44905874525234,0.225222960966644,0,0,0.183201743930407,97.5175089026868,124.089684527464,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.245976877086227,0.171567810298526,0,0,2.81481122752566,0.925884451585296,0,0,0,0,0,1.01056513432752,2.77791307545966,3.23432058798817,0,0,2.70838706696137,3.04205544681009,3.26988557035202,0,0.839910640994298,1.41775097242386,1.97028749946266,1.45316969256981,0,2.95597942737566,0,2.07328115540772,1.29707958075265,2.14612136824846,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.399891964728228,0,7.5338563714819,52.7084848707579,0,0,0,0,0.61642896765115,0,1.34502172792233,30.5397678312987,52.3975006908627,72.6421585343376,0.254094624222463,0,0,0.167516265334349,0,278.630612908352,460.708647174198,142.973352135432,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,27.7069155004669,11.8642810450239,12.0602140317892,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.355123450626254,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,1.10497186723076,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,1.72732732881711,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0.330569830721956,0,9.31572801210464,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,1.08890984861323,0.470719003883896,0,0,0,1.1486170010348,4.56702848308952,6.117097657139,5.12682468456746,3.81170840732462,4.52498500394814,9.07862635669804,8.64050299580984,3.17250070517708,0,0,0.980160863924127,0.929015875628594,2.59684583357601,2.06311345710401,0.637705090915289,0.399158742865633,1.7235483311913,14.8171507906718,21.1004261178461,5.89674074038263,4.79292825969704,2.82023812391442,5.01268954180134,0.677167111206413,0.963528450622197,2.62339619348362,1.70338495076131,5.15258017133647,0.921722292925374,1.3420566473545,2.0021897005429,1.75849285861836,0.556812347790485,0,0,0.33307196799782,0,0.18714054040822,1.31857361344705,0,3.56618829687931,0,0,0.296964680832639,0.307160702099232,7.95318118213038,4.3607519087259,0.445234820091624,1.3184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| |||
|short_description=p@chr10:129858129..129858150,+ | |||
}} |
Latest revision as of 11:37, 23 July 2015
Short description: | p@chr10:129858129..129858150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129858129..129858150, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.49e-50 | 136 |
myeloid leukocyte | 9.00e-49 | 72 |
hematopoietic stem cell | 9.76e-47 | 168 |
hematopoietic oligopotent progenitor cell | 6.88e-43 | 161 |
hematopoietic multipotent progenitor cell | 6.88e-43 | 161 |
nongranular leukocyte | 7.77e-43 | 115 |
hematopoietic cell | 3.99e-42 | 177 |
hematopoietic lineage restricted progenitor cell | 5.47e-41 | 120 |
granulocyte monocyte progenitor cell | 6.48e-41 | 67 |
defensive cell | 8.13e-41 | 48 |
phagocyte | 8.13e-41 | 48 |
monopoietic cell | 2.61e-40 | 59 |
monocyte | 2.61e-40 | 59 |
monoblast | 2.61e-40 | 59 |
promonocyte | 2.61e-40 | 59 |
macrophage dendritic cell progenitor | 4.38e-40 | 61 |
classical monocyte | 6.88e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.88e-39 | 42 |
myeloid lineage restricted progenitor cell | 7.06e-39 | 66 |
myeloid cell | 1.07e-37 | 108 |
common myeloid progenitor | 1.07e-37 | 108 |
intermediate monocyte | 8.25e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.25e-10 | 9 |
granulocyte | 3.94e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.38e-42 | 98 |
blood island | 7.38e-42 | 98 |
hemolymphoid system | 1.42e-40 | 108 |
bone marrow | 2.13e-35 | 76 |
immune system | 3.19e-34 | 93 |
bone element | 5.90e-31 | 82 |
skeletal element | 6.64e-27 | 90 |
skeletal system | 8.62e-23 | 100 |
neural tube | 1.21e-12 | 56 |
neural rod | 1.21e-12 | 56 |
future spinal cord | 1.21e-12 | 56 |
neural keel | 1.21e-12 | 56 |
regional part of nervous system | 3.84e-12 | 53 |
regional part of brain | 3.84e-12 | 53 |
lateral plate mesoderm | 9.71e-12 | 203 |
adult organism | 2.62e-11 | 114 |
regional part of forebrain | 8.98e-10 | 41 |
forebrain | 8.98e-10 | 41 |
anterior neural tube | 8.98e-10 | 41 |
future forebrain | 8.98e-10 | 41 |
brain grey matter | 2.40e-09 | 34 |
gray matter | 2.40e-09 | 34 |
telencephalon | 3.13e-09 | 34 |
regional part of telencephalon | 1.99e-08 | 32 |
cerebral hemisphere | 2.47e-08 | 32 |
neural plate | 2.33e-07 | 82 |
presumptive neural plate | 2.33e-07 | 82 |
brain | 2.34e-07 | 68 |
future brain | 2.34e-07 | 68 |
regional part of cerebral cortex | 3.55e-07 | 22 |
blood | 6.40e-07 | 15 |
haemolymphatic fluid | 6.40e-07 | 15 |
organism substance | 6.40e-07 | 15 |