FFCP PHASE1:Hg19::chr10:22916514..22916517,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:22916514..22916517,- | |||
|coexpression_cluster_id=C1307 | |||
|description=CAGE_peak_at_chr10:22916514..22916517,- | |||
|id=chr10:22916514..22916517,- | |||
|ontology_enrichment_celltype=CL:0000037!3.95e-19!172;CL:0000566!3.95e-19!172;CL:0002032!2.13e-18!165;CL:0000837!2.13e-18!165;CL:0000738!5.02e-17!140;CL:0000988!7.92e-17!182;CL:0002031!6.64e-16!124;CL:0000838!2.96e-15!52;CL:0002087!3.78e-15!119;CL:0000542!5.67e-15!53;CL:0000051!5.67e-15!53;CL:0000791!2.70e-10!18;CL:0000789!2.70e-10!18;CL:0002420!2.70e-10!18;CL:0002419!2.70e-10!18;CL:0000790!2.70e-10!18;CL:0000084!5.99e-09!25;CL:0000827!5.99e-09!25;CL:0000625!3.79e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.49e-16;18!CL:0000789;7.49e-16;18!CL:0002419;7.49e-16;18!CL:0000084;3.11e-11;25!CL:0000625;3.56e-11;11!CL:0000542;3.23e-09;53!CL:0000624;1.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.24e-16,52;CL:0000542,4.05e-16,53;CL:0000051,4.05e-16,53;CL:0000791,5.57e-16,18;CL:0000789,5.57e-16,18;CL:0002420,5.57e-16,18;CL:0002419,5.57e-16,18;CL:0000790,5.57e-16,18;CL:0000037,4.36e-12,168;CL:0002087,5.79e-12,115;CL:0000625,1.97e-11,11;CL:0000084,2.03e-11,25;CL:0000827,2.03e-11,25;CL:0002032,4.88e-11,161;CL:0000837,4.88e-11,161;CL:0000738,5.07e-11,136;CL:0002031,5.31e-11,120;CL:0000988,1.32e-10,177;CL:0000624,2.00e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.49e-16;18!CL:0000051;3.23e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-24!115;UBERON:0001049!7.17e-17!57;UBERON:0005068!7.17e-17!57;UBERON:0006241!7.17e-17!57;UBERON:0007135!7.17e-17!57;UBERON:0002020!1.01e-15!34;UBERON:0003528!1.01e-15!34;UBERON:0002780!1.14e-15!41;UBERON:0001890!1.14e-15!41;UBERON:0006240!1.14e-15!41;UBERON:0001893!1.73e-15!34;UBERON:0001017!5.03e-15!82;UBERON:0002791!5.06e-15!33;UBERON:0003080!8.48e-15!42;UBERON:0000955!1.12e-14!69;UBERON:0006238!1.12e-14!69;UBERON:0001869!3.71e-14!32;UBERON:0000073!5.31e-14!94;UBERON:0001016!5.31e-14!94;UBERON:0005743!1.08e-13!86;UBERON:0002616!1.34e-13!59;UBERON:0000956!2.11e-10!25;UBERON:0000203!2.11e-10!25;UBERON:0002619!5.01e-10!22;UBERON:0001950!8.25e-09!20;UBERON:0003075!1.40e-08!86;UBERON:0007284!1.40e-08!86;UBERON:0002346!2.95e-08!90;UBERON:0002308!4.52e-07!9;UBERON:0000125!4.52e-07!9;UBERON:0002420!7.25e-07!9;UBERON:0007245!7.25e-07!9;UBERON:0010009!7.25e-07!9;UBERON:0010011!7.25e-07!9;UBERON:0000454!7.25e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.53e-20;34!UBERON:0002020;4.53e-20;34!UBERON:0002791;1.27e-19;32!UBERON:0001893;2.50e-19;34!UBERON:0001869;3.64e-19;32!UBERON:0002780;6.63e-17;41!UBERON:0001890;6.63e-17;41!UBERON:0002619;2.03e-15;22!UBERON:0000956;2.31e-14;25!UBERON:0000203;2.31e-14;25!UBERON:0000073;1.68e-13;53!UBERON:0002616;1.68e-13;53!UBERON:0001950;3.16e-13;20!UBERON:0000125;1.08e-11;9!UBERON:0002308;1.08e-11;9!UBERON:0002420;2.69e-11;9!UBERON:0007245;2.69e-11;9!UBERON:0010009;2.69e-11;9!UBERON:0010011;2.69e-11;9!UBERON:0000454;2.69e-11;9!UBERON:0001017;1.20e-09;75!UBERON:0009663;4.28e-09;7!UBERON:0002298;1.39e-08;6!UBERON:0001016;3.34e-08;83!UBERON:0000955;3.51e-08;68!UBERON:0007023;4.27e-07;114!UBERON:0000349;7.64e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.01e-27,56;UBERON:0005068,1.01e-27,56;UBERON:0006241,1.01e-27,56;UBERON:0007135,1.01e-27,56;UBERON:0007023,6.17e-25,114;UBERON:0000073,1.95e-24,53;UBERON:0002616,1.95e-24,53;UBERON:0003528,1.51e-23,34;UBERON:0002020,1.51e-23,34;UBERON:0001893,3.79e-23,34;UBERON:0002780,9.07e-23,41;UBERON:0001890,9.07e-23,41;UBERON:0003080,9.07e-23,41;UBERON:0006240,9.07e-23,41;UBERON:0002791,3.90e-21,32;UBERON:0001869,9.35e-21,32;UBERON:0000955,1.85e-19,68;UBERON:0006238,1.85e-19,68;UBERON:0001017,5.89e-19,81;UBERON:0003075,9.14e-18,82;UBERON:0007284,9.14e-18,82;UBERON:0001016,1.05e-17,89;UBERON:0002346,2.69e-16,86;UBERON:0002619,3.86e-15,22;UBERON:0000956,4.91e-14,25;UBERON:0000203,4.91e-14,25;UBERON:0003056,2.95e-13,61;UBERON:0001950,6.06e-13,20;UBERON:0010371,9.14e-13,104;UBERON:0000125,6.67e-12,9;UBERON:0002308,6.67e-12,9;UBERON:0002420,1.61e-11,9;UBERON:0007245,1.61e-11,9;UBERON:0010009,1.61e-11,9;UBERON:0010011,1.61e-11,9;UBERON:0000454,1.61e-11,9;UBERON:0009663,2.69e-09,7;UBERON:0002298,1.72e-08,6;UBERON:0010314,8.36e-08,132;UBERON:0000349,5.08e-07,5;UBERON:0000200,7.49e-07,6 | |||
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| |||
|short_description=p@chr10:22916514..22916517,- | |||
}} |
Latest revision as of 12:37, 23 July 2015
Short description: | p@chr10:22916514..22916517, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22916514..22916517, - |
Coexpression cluster: | C1307_thalamus_globus_substantia_optic_spinal_locus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.24e-16 | 52 |
lymphocyte | 4.05e-16 | 53 |
common lymphoid progenitor | 4.05e-16 | 53 |
mature alpha-beta T cell | 5.57e-16 | 18 |
alpha-beta T cell | 5.57e-16 | 18 |
immature T cell | 5.57e-16 | 18 |
mature T cell | 5.57e-16 | 18 |
immature alpha-beta T cell | 5.57e-16 | 18 |
hematopoietic stem cell | 4.36e-12 | 168 |
nongranular leukocyte | 5.79e-12 | 115 |
CD8-positive, alpha-beta T cell | 1.97e-11 | 11 |
T cell | 2.03e-11 | 25 |
pro-T cell | 2.03e-11 | 25 |
hematopoietic oligopotent progenitor cell | 4.88e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.88e-11 | 161 |
leukocyte | 5.07e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 5.31e-11 | 120 |
hematopoietic cell | 1.32e-10 | 177 |
CD4-positive, alpha-beta T cell | 2.00e-07 | 6 |