FFCP PHASE1:Hg19::chr12:56473628..56473680,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3431 | |||
|TSSclassifier=strong | |||
|UniProt=P21860,F8VW48,F8VRL0 | |||
|association_with_transcript=0bp_to_ENST00000267101,ENST00000549061,ENST00000549282_5end | |||
|cluster_id=chr12:56473628..56473680,+ | |||
|description=CAGE_peak_3_at_ERBB3_5end | |||
|id=chr12:56473628..56473680,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.23e-07!7;CL:0000586!1.23e-07!7;CL:0000066!4.45e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.24e-11;7!CL:0000586;1.24e-11;7!CL:0002322;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.43e-11,7;CL:0000586,1.43e-11,7;CL:0002322,2.68e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.07e-08;13!UBERON:0004161;3.28e-08;11!UBERON:0003104;8.47e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.21e-19!106;DOID:0050687!5.57e-15!143;DOID:299!2.13e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.50e-10;25!DOID:5093;7.29e-07;4!DOID:1612;7.29e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.28e-10,25;DOID:305,8.69e-10,106;DOID:0050687,3.05e-09,143;DOID:5093,7.55e-07,4;DOID:1612,7.55e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.40e-28!115;UBERON:0001049!3.50e-18!57;UBERON:0005068!3.50e-18!57;UBERON:0006241!3.50e-18!57;UBERON:0007135!3.50e-18!57;UBERON:0001017!4.23e-15!82;UBERON:0003080!9.15e-15!42;UBERON:0002780!2.33e-14!41;UBERON:0001890!2.33e-14!41;UBERON:0006240!2.33e-14!41;UBERON:0002616!2.39e-14!59;UBERON:0005743!2.48e-14!86;UBERON:0001893!4.89e-14!34;UBERON:0002020!6.60e-14!34;UBERON:0003528!6.60e-14!34;UBERON:0002791!1.51e-13!33;UBERON:0004121!5.03e-13!169;UBERON:0000955!6.88e-13!69;UBERON:0006238!6.88e-13!69;UBERON:0001869!8.90e-13!32;UBERON:0000073!9.56e-13!94;UBERON:0001016!9.56e-13!94;UBERON:0000924!1.57e-12!173;UBERON:0006601!1.57e-12!173;UBERON:0002619!4.87e-12!22;UBERON:0003075!1.55e-11!86;UBERON:0007284!1.55e-11!86;UBERON:0000062!5.08e-11!511;UBERON:0001950!5.39e-11!20;UBERON:0002346!8.65e-11!90;UBERON:0000956!1.41e-10!25;UBERON:0000203!1.41e-10!25;UBERON:0004119!5.00e-10!169;UBERON:0000925!5.00e-10!169;UBERON:0006595!5.00e-10!169;UBERON:0001007!1.26e-09!155;UBERON:0001555!1.26e-09!155;UBERON:0007026!1.26e-09!155;UBERON:0000153!2.64e-09!129;UBERON:0007811!2.64e-09!129;UBERON:0004921!3.65e-09!129;UBERON:0004185!3.65e-09!129;UBERON:0000033!4.04e-09!123;UBERON:0003056!4.08e-09!61;UBERON:0000475!8.48e-09!365;UBERON:0000064!1.58e-08!219;UBERON:0000922!3.35e-08!612;UBERON:0000481!3.53e-08!347;UBERON:0004111!5.50e-08!241;UBERON:0000468!7.87e-08!659;UBERON:0000077!1.68e-07!130;UBERON:0000160!2.77e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.81e-12;41!UBERON:0001890;8.81e-12;41!UBERON:0001893;4.65e-11;34!UBERON:0002619;8.45e-11;22!UBERON:0001869;1.52e-10;32!UBERON:0005409;1.58e-10;22!UBERON:0002791;2.54e-10;32!UBERON:0000160;2.80e-10;17!UBERON:0004921;5.55e-10;33!UBERON:0003528;2.21e-09;34!UBERON:0002020;2.21e-09;34!UBERON:0000073;2.30e-09;53!UBERON:0002616;2.30e-09;53!UBERON:0001950;3.55e-09;20!UBERON:0000956;4.32e-09;25!UBERON:0000203;4.32e-09;25!UBERON:0000922;7.94e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.50e-20,114;UBERON:0001049,2.15e-17,56;UBERON:0005068,2.15e-17,56;UBERON:0006241,2.15e-17,56;UBERON:0007135,2.15e-17,56;UBERON:0011216,3.65e-17,223;UBERON:0000073,1.03e-14,53;UBERON:0002616,1.03e-14,53;UBERON:0002780,5.56e-14,41;UBERON:0001890,5.56e-14,41;UBERON:0003080,5.56e-14,41;UBERON:0006240,5.56e-14,41;UBERON:0001017,6.07e-14,81;UBERON:0001016,1.39e-12,89;UBERON:0001893,3.17e-12,34;UBERON:0000955,2.61e-11,68;UBERON:0006238,2.61e-11,68;UBERON:0003528,6.14e-11,34;UBERON:0002020,6.14e-11,34;UBERON:0003075,8.98e-11,82;UBERON:0007284,8.98e-11,82;UBERON:0002791,1.55e-10,32;UBERON:0001869,1.62e-10,32;UBERON:0002619,1.86e-10,22;UBERON:0010371,2.56e-10,104;UBERON:0000160,2.81e-10,17;UBERON:0002346,7.39e-10,86;UBERON:0004121,2.50e-09,171;UBERON:0000924,2.50e-09,171;UBERON:0006601,2.50e-09,171;UBERON:0003056,4.88e-09,61;UBERON:0001950,6.21e-09,20;UBERON:0005409,7.04e-09,25;UBERON:0000956,8.44e-09,25;UBERON:0000203,8.44e-09,25;UBERON:0004921,1.51e-07,118 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,2.79120467188971,1.74753097704138,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,9.51394907810844,7.68672656264614,7.32021840077966,6.11600224590686,7.82194637714448,3.6497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,4.67356066463832,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.571481048629521,0.381988425558278,0,0,0.719792448923265,2.10240140490742,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0.788512075169673,0.234282829985426,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0.303127571446259,0,1.81434175997808,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,3.02148623979056,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,1.75169719801128,0,0,0.574265537996172,0,0,0.386682873168488,0,0,0,0,0.145016693914229,0.170453254832202,0.623224249527161,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,1.31801321087491,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,1.92283328029452,0,1.96032172784825,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0.36408156524854,0.334330152832435,0,2.62618933211459,3.56357616999166,1.53580351049616,0,1.68803299692615,0,0,0,0.398495976502139,2.76283915531148,7.80991518348256,0,0,0,0.269605053441981,1.9692329214317,0,0.295930216910801,0,1.11136990144637,4.84666373047609,1.20598527610407,0,12.240104771006,11.1948799995131,0.724999575434793,0.682760689712998,1.01701460117107,1.89110145414349,0,0,0,0,0.361789315876224,0,0.442317039724898,1.18219047581419,0.438770794307945,0,0.557694977114413,0.384751292518985,0,2.53620294826866,4.48788222048861,3.58536327342627,1.91400695839152,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0,1.89898258075224,2.28525931422807,4.38194521445217,0,4.97630965539252,1.94606641907346,9.16545217400438,0,0,0,4.65067817566672,0.802577647298789,2.81117334870407,0,1.9566461893209,0.242780379534093,0.394584402849391,7.25944296291983,1.22429104652196,0,0.300646838828985,0.103688191397247,0,0.661983911750998,0,0,1.13843818411917,0,2.60339607502696,1.07791637155815,0.435296032902013,1.22308667769421,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,1.74580229679155,2.38291542067051,0.451961481561065,0,0,0.759729551470544,3.12882212375685,0.320635281006135,2.98834192635094,0,3.74635084600676,0,2.57392496792947,0,0,0.471388069233591,0,0.104602846312333,0,0,3.00210144354895,1.50595916781192,0,0,0,0.558564802544508,0.687481272035051,0,1.99679000498991,0,0.223171457441873,0.268733889946905,0,13.9795139432945,5.19969003227676,6.18118937858748,4.71824806979294,2.55911451938347,0,1.59045937961861,1.0896272488926,8.51991686864602,7.28959013965339,5.40072439437941,0,0,1.45798935979259,0.670869375198532,0.788057072991982,5.14054963722981,0,0,0.575745591958336,0.714695326373367,0,0,0,0,0,0,0,0,0,1.46552233678082,2.65013777824443,2.58565912723101,0.92562821219883,0.171086837884329,7.04815022316672,1.70859860108311,3.14408610199332,4.55662960881915,0,0,0,0.638341257770182,0,0,0,0,3.14108192500469,2.65820453990096,1.34228891392159,0.751145584238999,1.72022758707021,0.332787154610557,2.54595252059672,0.968440444553616,0,3.1846314683746,2.85465333544967,0,0.936669811613763,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,1.99110597799025,2.8339315265117,0.957803154342908,1.8460472781668,0.504143392443436,1.10651603942749,0.807378228159255,11.4215536207324,0.392590874004102,1.41563668017288,0.550285795565037,0.231051332300676,0,0,0.198916222116275,0.300841313397029,0,0.781514011233092,4.45241380618418,0.49131575253029,1.03499260351932,1.14813893851271,1.56215619722769,1.44680757550829,1.52197944465376,0.546974809018219,1.64477330057155,0,0.175871244359621,0.511049710558381,1.07140367175657,0,0,0,1.86274977341542,0,0,1.69924332442079,1.052364377005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| |||
|short_description=p3@ERBB3 | |||
}} |
Latest revision as of 09:36, 19 September 2015
Short description: | p3@ERBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ERBB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000267101, ENST00000549061, ENST00000549282_5end |
EntrezGene: | ERBB3 |
HGNC: | 3431 |
UniProt: | P21860F8VW48F8VRL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.43e-11 | 7 |
germ cell | 1.43e-11 | 7 |
embryonic stem cell | 2.68e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.28e-10 | 25 |
carcinoma | 8.69e-10 | 106 |
cell type cancer | 3.05e-09 | 143 |
thoracic cancer | 7.55e-07 | 4 |
breast cancer | 7.55e-07 | 4 |