FFCP PHASE1:Hg19::chr16:49670005..49670020,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:49670005..49670020,- | |||
|coexpression_cluster_id=C275 | |||
|description=CAGE_peak_at_chr16:49670005..49670020,- | |||
|id=chr16:49670005..49670020,- | |||
|ontology_enrichment_celltype=CL:0002549!2.08e-24!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.39e-47!12;UBERON:0002028!1.39e-47!12;UBERON:0007277!1.39e-47!12;UBERON:0004732!6.81e-44!13;UBERON:0003076!5.49e-38!15;UBERON:0003057!5.49e-38!15;UBERON:0002298!2.80e-37!8;UBERON:0001896!2.35e-36!3;UBERON:0005290!2.35e-36!3;UBERON:0010096!2.35e-36!3;UBERON:0003947!2.08e-24!2;UBERON:0005629!2.08e-24!2;UBERON:0005358!2.08e-24!2;UBERON:0001886!2.08e-24!2;UBERON:0004086!2.08e-24!2;UBERON:0005282!2.08e-24!2;UBERON:0005281!2.08e-24!2;UBERON:0002616!2.91e-22!59;UBERON:0002680!3.21e-21!9;UBERON:0001895!3.21e-21!9;UBERON:0010092!3.21e-21!9;UBERON:0000955!1.34e-18!69;UBERON:0006238!1.34e-18!69;UBERON:0000988!4.90e-17!3;UBERON:0002300!1.27e-16!3;UBERON:0004177!8.74e-16!7;UBERON:0000153!9.22e-16!129;UBERON:0007811!9.22e-16!129;UBERON:0001017!1.67e-15!82;UBERON:0001049!2.23e-15!57;UBERON:0005068!2.23e-15!57;UBERON:0006241!2.23e-15!57;UBERON:0007135!2.23e-15!57;UBERON:0005743!9.83e-15!86;UBERON:0000073!3.11e-13!94;UBERON:0001016!3.11e-13!94;UBERON:0007190!6.06e-13!1;UBERON:0002370!6.44e-13!4;UBERON:0005058!6.44e-13!4;UBERON:0009113!6.44e-13!4;UBERON:0003295!6.44e-13!4;UBERON:0005562!6.44e-13!4;UBERON:0003075!3.23e-12!86;UBERON:0007284!3.23e-12!86;UBERON:0000033!6.53e-12!123;UBERON:0002346!1.27e-11!90;UBERON:0000063!6.61e-11!97;UBERON:0005284!2.35e-10!5;UBERON:0002200!4.29e-10!11;UBERON:0006876!4.29e-10!11;UBERON:0003351!6.51e-09!6;UBERON:0002037!1.17e-08!6;UBERON:0006215!1.17e-08!6;UBERON:0000200!1.22e-08!6;UBERON:0004121!3.35e-08!169;UBERON:0000924!5.63e-08!173;UBERON:0006601!5.63e-08!173;UBERON:0002148!2.74e-07!2;UBERON:0009662!2.74e-07!2;UBERON:0000064!2.96e-07!219;UBERON:0000477!3.09e-07!286;UBERON:0007023!3.15e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.83e-98;6!UBERON:0001896;1.52e-87;3!UBERON:0005290;1.52e-87;3!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000988;2.62e-23;3!UBERON:0000073;1.70e-09;53!UBERON:0002616;1.70e-09;53!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.83e-98,6;UBERON:0001896,1.52e-87,3;UBERON:0005290,1.52e-87,3;UBERON:0010096,1.52e-87,3;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000988,2.62e-23,3;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,1.14681839138014,0.221858103073705,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59306409875268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.710478008196067,0.931120714437869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:49670005..49670020,- | |||
}} |
Latest revision as of 09:21, 25 July 2015
Short description: | p@chr16:49670005..49670020, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:49670005..49670020, - |
Coexpression cluster: | C275_pons_medulla_cerebellum_locus_thalamus_diencephalon_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 1.83e-98 | 6 |
medulla oblongata | 1.52e-87 | 3 |
myelencephalon | 1.52e-87 | 3 |
future myelencephalon | 1.52e-87 | 3 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
pons | 2.62e-23 | 3 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |