FFCP PHASE1:Hg19::chr19:3178754..3178779,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8698 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3170 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002lxg.2_5end | |||
|cluster_id=chr19:3178754..3178779,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_S1PR4_5end | |||
|id=chr19:3178754..3178779,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.87e-70!172;CL:0000566!1.87e-70!172;CL:0000988!1.42e-67!182;CL:0002032!2.67e-65!165;CL:0000837!2.67e-65!165;CL:0000738!3.97e-63!140;CL:0002087!2.04e-61!119;CL:0002031!7.12e-54!124;CL:0000542!7.11e-39!53;CL:0000051!7.11e-39!53;CL:0000838!1.41e-38!52;CL:0000763!5.97e-27!112;CL:0000049!5.97e-27!112;CL:0002057!2.30e-23!42;CL:0000766!2.90e-23!76;CL:0000084!1.30e-21!25;CL:0000827!1.30e-21!25;CL:0000860!8.52e-21!45;CL:0002194!1.47e-20!63;CL:0000576!1.47e-20!63;CL:0000040!1.47e-20!63;CL:0000559!1.47e-20!63;CL:0002009!2.15e-19!65;CL:0000839!1.42e-18!70;CL:0000791!1.24e-17!18;CL:0000789!1.24e-17!18;CL:0002420!1.24e-17!18;CL:0002419!1.24e-17!18;CL:0000790!1.24e-17!18;CL:0000557!2.14e-17!71;CL:0000945!8.27e-16!24;CL:0000826!8.27e-16!24;CL:0000236!5.74e-13!14;CL:0000134!5.02e-12!358;CL:0000625!9.06e-12!11;CL:0002320!4.53e-11!365;CL:0000094!6.53e-08!8;CL:0000219!7.09e-08!390;CL:0002393!9.20e-08!9;CL:0002397!9.20e-08!9;CL:0000624!9.66e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.30e-29;53!CL:0000084;2.10e-27;25!CL:0000791;2.02e-23;18!CL:0000789;2.02e-23;18!CL:0002419;2.02e-23;18!CL:0000945;1.14e-19;24!CL:0002087;3.69e-18;104!CL:0000236;2.26e-16;13!CL:0000625;2.02e-15;11!CL:0000738;5.94e-15;136!CL:0000988;3.80e-14;177!CL:0000576;9.33e-12;48!CL:0000860;1.46e-10;33!CL:0002057;1.46e-10;33!CL:0000094;3.59e-10;8!CL:0000763;1.35e-09;100!CL:0000473;1.44e-09;39!CL:0000234;1.44e-09;39!CL:0000766;2.04e-09;69!CL:0000624;1.26e-08;6!CL:0000081;2.37e-08;11!CL:0002393;8.86e-07;6!CL:0002397;8.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.39e-79,168;CL:0000988,2.01e-77,177;CL:0002032,2.65e-72,161;CL:0000837,2.65e-72,161;CL:0000738,6.85e-71,136;CL:0002087,1.76e-67,115;CL:0002031,1.63e-59,120;CL:0000838,3.41e-49,52;CL:0000542,6.36e-48,53;CL:0000051,6.36e-48,53;CL:0000084,2.88e-27,25;CL:0000827,2.88e-27,25;CL:0000763,8.31e-27,108;CL:0000049,8.31e-27,108;CL:0000791,2.11e-23,18;CL:0000789,2.11e-23,18;CL:0002420,2.11e-23,18;CL:0002419,2.11e-23,18;CL:0000790,2.11e-23,18;CL:0000766,4.91e-23,72;CL:0000945,8.74e-20,24;CL:0000826,8.74e-20,24;CL:0000860,2.79e-19,42;CL:0002057,2.79e-19,42;CL:0000134,5.21e-19,354;CL:0002194,1.14e-18,59;CL:0000576,1.14e-18,59;CL:0000040,1.14e-18,59;CL:0000559,1.14e-18,59;CL:0000473,4.81e-18,48;CL:0000234,4.81e-18,48;CL:0002320,5.19e-18,361;CL:0002009,1.10e-17,61;CL:0000236,4.68e-17,14;CL:0000839,2.03e-16,66;CL:0000557,3.20e-16,67;CL:0000625,1.99e-15,11;CL:0000219,1.51e-14,386;CL:0000034,1.16e-10,441;CL:0000048,1.84e-10,427;CL:0000094,3.43e-10,8;CL:0002393,5.45e-10,9;CL:0002397,5.45e-10,9;CL:0000723,6.47e-10,433;CL:0000624,1.31e-08,6;CL:0000081,2.57e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.30e-29;53!CL:0000790;2.02e-23;18!CL:0002057;2.76e-14;42!CL:0000049;1.62e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!3.77e-09!51;DOID:0060083!3.77e-09!51;DOID:1240!2.50e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.21e-10,51;DOID:0060083,4.21e-10,51;DOID:1240,6.77e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-28!102;UBERON:0003061!3.71e-28!102;UBERON:0002193!1.79e-25!112;UBERON:0002371!3.87e-15!80;UBERON:0000178!1.72e-13!15;UBERON:0000179!1.72e-13!15;UBERON:0000463!1.72e-13!15;UBERON:0001474!6.42e-13!86;UBERON:0002405!2.40e-12!115;UBERON:0002384!3.75e-10!375;UBERON:0004765!1.01e-08!101;UBERON:0001434!1.01e-08!101;UBERON:0007023!2.04e-08!115;UBERON:0003081!5.78e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.06e-18;15!UBERON:0000179;8.06e-18;15!UBERON:0000463;8.06e-18;15!UBERON:0002390;6.00e-12;32!UBERON:0002193;4.31e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-30,98;UBERON:0003061,3.17e-30,98;UBERON:0002193,3.95e-28,108;UBERON:0000178,9.09e-18,15;UBERON:0000179,9.09e-18,15;UBERON:0000463,9.09e-18,15;UBERON:0002384,1.17e-16,371;UBERON:0002405,2.74e-16,93;UBERON:0002371,5.77e-14,76;UBERON:0001474,4.01e-12,82;UBERON:0004765,4.34e-10,90;UBERON:0001434,4.60e-08,100;UBERON:0003081,4.07e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.88831355734875,1.49550484495991,5.11373559903575,4.60595277716655,9.44378352228064,0,0,0,1.31694240986513,2.13253848731132,7.34001098337118,2.76997704265939,2.80762226458198,4.55722828503289,0.671746422719773,2.59114932815184,1.03030227053675,11.341062624806,4.53451132426571,6.0646015296954,1.85943229524548,2.87817521615278,0.309706370895104,2.01384674625505,2.81776777182011,0.709446689665756,5.5159308917859,0.645484683583826,2.70852973188684,6.77672422353377,0.545812300115692,2.9214052977861,2.44867113896722,0.641858054152187,1.91801137739712,3.62836430205388,5.18605509816243,3.40979800426155,2.03146467040009,0.56738522469114,0,3.26623264833766,1.5644487552606,0.868755378820466,0.605399502633369,2.20966581592539,0.632924774881769,4.22510572623884,8.2915676986367,5.2414661377094,4.71780250815279,6.75796017786778,1.76798145366788,11.1154970059087,11.7360839547463,6.39324538176219,26.3994366691984,28.945346396893,24.016749854316,29.8711155796555,25.2249471832688,29.8871268776331,33.0522436392431,26.7135051269902,9.10740750575117,6.45960908308033,5.73409842187843,9.25199300053181,9.52864557068611,9.74521113667785,8.65522988500866,14.5413982217191,11.1024809459735,30.7623151518848,22.1627141310841,28.8803161498187,13.6378709885538,28.6324874194896,25.0415021353612,24.3687284041983,13.8109970520158,46.4971490604201,45.5207716459574,20.5547380754595,30.3985019564433,9.27369874352168,12.307784742451,11.5042556078577,11.4989076185474,21.1888470844449,22.6100091225134,31.2700975389193,9.61474829674111,37.2721534759193,31.9030892389645,38.018081777935,26.6517960767658,22.01369711856,18.7396089828519,33.6223697902504,44.3409118337365,9.27391018833769,13.1045695933919,9.84805946403033,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,2.27183175558278,3.65672448328461,3.72282289452822,1.66943437013739,1.14398982156026,1.48583000531826,0,0,0,0.56530794192401,0,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,0,0.949265659568129,0,18.4492584410489,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,3.7440682422278,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,7.06136407159222,4.72873824484625,6.90008239550455,8.47064039446339,0,0,0,0,0,14.9801404789436,17.9496875522415,34.3964876151909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,8.41285383192606,11.3131211271651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0.657779629937804,1.3071772551245,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.659006605437454,0,0,0,0,31.9691993816267,29.8208510785526,43.2931862252364,17.6291513838764,16.0431286503616,25.9389324477087,22.6813203640008,43.6218846961849,0,0,0,0.557409525377156,2.16403819464667,1.06712765022621,0.159426272728822,1.99579371432817,8.23473091569177,2.75175657541048,3.57084134302011,5.33514638415572,0,2.97691801968744,2.50634477090067,3.89371088943688,2.72999727676289,2.01799707191048,1.27753871307098,0,0,0,0,1.75849285861836,0,0,0.540911356951966,0,1.4098700508785,0,0.73254089635947,0,11.1443384277478,0,0,0.296964680832639,0,0,0.422008249231538,0,7.25137046597742,0,0.398495976502139,1.38141957765574,0,0,1.96935688737711,0,0,0,0,0.295930216910801,23.948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0.0915975934018623,0,5.10966490978682,4.08148666627064,1.82832850090172,0,0,0,0,3.97341447450947,0,0,0,0,1.99052386215701,0.353830258013357,0,1.18608451472249,2.71840665682306,2.08843899010911,0.134802265961354,0,0,3.10173141666632,0,0,0,1.20990716048664,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,3.41753560563109,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0.89268582976749,0.268733889946905,0,0,0,0,0,0,1.86281330544726,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.246277562248017,0,0,0.439656701034247,2.65013777824443,0.258565912723101,0,0,0,1.81538601365081,0.157204305099666,3.72815149812476,19.846640872478,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,10.7993193761662,4.05428572837735,0.172214979660816,0,0,0,0,0,0,0,0,0.1697325299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| |||
|short_description=p1@S1PR4 | |||
}} |
Latest revision as of 05:02, 17 September 2015
Short description: | p1@S1PR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S1PR4_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_uc002lxg.2_5end |
EntrezGene: | S1PR4 |
HGNC: | 3170 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-30 | 98 |
blood island | 3.17e-30 | 98 |
hemolymphoid system | 3.95e-28 | 108 |
blood | 9.09e-18 | 15 |
haemolymphatic fluid | 9.09e-18 | 15 |
organism substance | 9.09e-18 | 15 |
connective tissue | 1.17e-16 | 371 |
immune system | 2.74e-16 | 93 |
bone marrow | 5.77e-14 | 76 |
bone element | 4.01e-12 | 82 |
skeletal element | 4.34e-10 | 90 |
skeletal system | 4.60e-08 | 100 |
lateral plate mesoderm | 4.07e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.21e-10 | 51 |
immune system cancer | 4.21e-10 | 51 |
leukemia | 6.77e-08 | 39 |