FFCP PHASE1:Hg19::chr8:79428539..79428606,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:79428539..79428606,+
|short_description=p1@PKIA
|description=CAGE_peak_1_at_PKIA_5end
|association_with_transcript=0bp_to_ENST00000352966_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5569 | |EntrezGene=5569 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9017 | |HGNC=9017 | ||
|TSSclassifier=strong | |||
|UniProt=P61925 | |UniProt=P61925 | ||
|association_with_transcript=0bp_to_ENST00000352966_5end | |||
|cluster_id=chr8:79428539..79428606,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_PKIA_5end | |||
|id=chr8:79428539..79428606,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.20e-10!24;CL:0000071!1.65e-07!18;CL:0002546!1.65e-07!18;CL:0000115!5.97e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.16e-10;24!CL:0000071;1.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.13e-10,24;CL:0000071,1.49e-07,18;CL:0002546,1.49e-07,18;CL:0000115,2.99e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-26!57;UBERON:0005068!1.87e-26!57;UBERON:0006241!1.87e-26!57;UBERON:0007135!1.87e-26!57;UBERON:0000073!2.66e-26!94;UBERON:0001016!2.66e-26!94;UBERON:0001017!4.05e-25!82;UBERON:0000025!1.00e-24!194;UBERON:0005743!2.19e-24!86;UBERON:0002616!2.29e-22!59;UBERON:0002780!8.06e-22!41;UBERON:0001890!8.06e-22!41;UBERON:0006240!8.06e-22!41;UBERON:0003080!4.03e-21!42;UBERON:0002346!7.44e-21!90;UBERON:0004111!8.23e-21!241;UBERON:0002020!1.23e-20!34;UBERON:0003528!1.23e-20!34;UBERON:0001893!1.33e-20!34;UBERON:0003075!2.71e-20!86;UBERON:0007284!2.71e-20!86;UBERON:0000955!2.98e-20!69;UBERON:0006238!2.98e-20!69;UBERON:0001869!4.99e-20!32;UBERON:0002791!5.34e-20!33;UBERON:0007023!1.79e-19!115;UBERON:0000477!7.76e-18!286;UBERON:0000483!1.22e-17!309;UBERON:0000119!2.70e-17!312;UBERON:0003056!2.03e-16!61;UBERON:0000956!9.96e-16!25;UBERON:0000203!9.96e-16!25;UBERON:0002619!6.14e-15!22;UBERON:0001009!3.23e-14!113;UBERON:0001950!1.19e-13!20;UBERON:0004535!4.69e-13!110;UBERON:0000153!4.15e-12!129;UBERON:0007811!4.15e-12!129;UBERON:0000055!1.72e-11!69;UBERON:0000033!7.11e-11!123;UBERON:0004872!7.52e-11!84;UBERON:0001981!8.57e-11!60;UBERON:0007500!8.57e-11!60;UBERON:0004537!8.57e-11!60;UBERON:0006965!8.57e-11!60;UBERON:0002049!1.73e-10!79;UBERON:0007798!1.73e-10!79;UBERON:0000924!2.06e-10!173;UBERON:0006601!2.06e-10!173;UBERON:0004121!6.85e-10!169;UBERON:0001986!1.65e-07!18;UBERON:0004638!1.65e-07!18;UBERON:0004852!1.65e-07!18;UBERON:0003914!1.92e-07!118;UBERON:0001637!3.38e-07!42;UBERON:0003509!3.38e-07!42;UBERON:0004572!3.38e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.55e-18;32!UBERON:0003528;4.37e-18;34!UBERON:0002020;4.37e-18;34!UBERON:0001893;5.58e-18;34!UBERON:0002791;5.69e-18;32!UBERON:0002780;4.24e-16;41!UBERON:0001890;4.24e-16;41!UBERON:0000956;8.09e-16;25!UBERON:0000203;8.09e-16;25!UBERON:0000073;3.85e-15;53!UBERON:0002616;3.85e-15;53!UBERON:0002619;4.84e-15;22!UBERON:0001950;9.59e-14;20!UBERON:0001017;1.18e-10;75!UBERON:0000955;4.80e-10;68!UBERON:0001016;7.51e-10;83!UBERON:0004638;1.51e-07;18!UBERON:0001986;1.51e-07;18!UBERON:0004852;1.51e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.50e-27,89;UBERON:0001049,2.66e-27,56;UBERON:0005068,2.66e-27,56;UBERON:0006241,2.66e-27,56;UBERON:0007135,2.66e-27,56;UBERON:0001017,1.16e-25,81;UBERON:0000073,1.20e-25,53;UBERON:0002616,1.20e-25,53;UBERON:0000025,1.86e-25,192;UBERON:0002346,1.70e-23,86;UBERON:0003075,5.79e-23,82;UBERON:0007284,5.79e-23,82;UBERON:0002780,5.72e-22,41;UBERON:0001890,5.72e-22,41;UBERON:0003080,5.72e-22,41;UBERON:0006240,5.72e-22,41;UBERON:0004111,6.70e-21,240;UBERON:0003528,8.92e-21,34;UBERON:0002020,8.92e-21,34;UBERON:0000955,9.61e-21,68;UBERON:0006238,9.61e-21,68;UBERON:0001893,9.63e-21,34;UBERON:0001869,3.65e-20,32;UBERON:0002791,1.09e-19,32;UBERON:0007023,3.16e-19,114;UBERON:0000483,8.89e-19,306;UBERON:0000119,2.05e-18,309;UBERON:0010314,5.30e-18,132;UBERON:0003056,5.45e-17,61;UBERON:0000956,7.84e-16,25;UBERON:0000203,7.84e-16,25;UBERON:0002619,4.90e-15,22;UBERON:0010371,7.61e-15,104;UBERON:0001009,3.52e-14,112;UBERON:0001950,9.66e-14,20;UBERON:0004535,5.17e-13,109;UBERON:0000055,1.49e-11,68;UBERON:0004121,2.52e-11,171;UBERON:0000924,2.52e-11,171;UBERON:0006601,2.52e-11,171;UBERON:0007500,6.42e-11,59;UBERON:0001981,6.42e-11,59;UBERON:0004537,6.42e-11,59;UBERON:0006965,6.42e-11,59;UBERON:0004872,6.90e-11,83;UBERON:0002049,1.96e-10,78;UBERON:0007798,1.96e-10,78;UBERON:0003914,8.99e-08,117;UBERON:0004638,1.49e-07,18;UBERON:0001986,1.49e-07,18;UBERON:0004852,1.49e-07,18;UBERON:0001637,3.07e-07,42;UBERON:0003509,3.07e-07,42;UBERON:0004572,3.07e-07,42;UBERON:0011216,7.15e-07,223 | |||
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| ||
|short_description=p1@PKIA | |||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p1@PKIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKIA_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000352966_5end |
EntrezGene: | PKIA |
HGNC: | 9017 |
UniProt: | P61925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.13e-10 | 24 |
blood vessel endothelial cell | 1.49e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.49e-07 | 18 |
endothelial cell | 2.99e-07 | 36 |