FFCP PHASE1:Hg19::chr1:52607718..52607828,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9372 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6775 | |||
|TSSclassifier=strong | |||
|UniProt=O95405 | |||
|association_with_transcript=-217bp_to_ENST00000287727,ENST00000357206,ENST00000361625,NM_004799,NM_007323,NM_007324,uc001ctn.2,uc001cto.2,uc001ctp.2_5end | |||
|cluster_id=chr1:52607718..52607828,+ | |||
|description=CAGE_peak_1_at_ZFYVE9_5end | |||
|id=chr1:52607718..52607828,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.11e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-24!115;UBERON:0001049!1.61e-21!57;UBERON:0005068!1.61e-21!57;UBERON:0006241!1.61e-21!57;UBERON:0007135!1.61e-21!57;UBERON:0000073!7.45e-21!94;UBERON:0001016!7.45e-21!94;UBERON:0001017!8.76e-21!82;UBERON:0000924!6.48e-20!173;UBERON:0006601!6.48e-20!173;UBERON:0005743!8.23e-20!86;UBERON:0004121!1.10e-19!169;UBERON:0000955!1.83e-19!69;UBERON:0006238!1.83e-19!69;UBERON:0002616!1.94e-19!59;UBERON:0000475!2.48e-19!365;UBERON:0003080!2.47e-18!42;UBERON:0002780!8.56e-18!41;UBERON:0001890!8.56e-18!41;UBERON:0006240!8.56e-18!41;UBERON:0000033!4.43e-16!123;UBERON:0001893!3.62e-15!34;UBERON:0002619!4.41e-15!22;UBERON:0002020!4.60e-15!34;UBERON:0003528!4.60e-15!34;UBERON:0002346!5.33e-15!90;UBERON:0003075!6.53e-15!86;UBERON:0007284!6.53e-15!86;UBERON:0000153!7.90e-15!129;UBERON:0007811!7.90e-15!129;UBERON:0001869!8.64e-15!32;UBERON:0002791!1.56e-14!33;UBERON:0001950!4.13e-14!20;UBERON:0004111!4.74e-13!241;UBERON:0000468!5.61e-13!659;UBERON:0000956!1.61e-12!25;UBERON:0000203!1.61e-12!25;UBERON:0000481!1.10e-11!347;UBERON:0000483!9.80e-11!309;UBERON:0000119!2.14e-10!312;UBERON:0003056!2.38e-10!61;UBERON:0000467!2.48e-10!625;UBERON:0000477!3.68e-10!286;UBERON:0000480!3.83e-10!626;UBERON:0000025!1.45e-09!194;UBERON:0000062!5.00e-09!511;UBERON:0000922!3.48e-08!612;UBERON:0002050!2.18e-07!605;UBERON:0005423!2.18e-07!605;UBERON:0000923!3.96e-07!604;UBERON:0005291!3.96e-07!604;UBERON:0006598!3.96e-07!604;UBERON:0002532!3.96e-07!604;UBERON:0000064!9.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.74e-15;22!UBERON:0001950;3.70e-14;20!UBERON:0001869;1.69e-13;32!UBERON:0001893;3.92e-13;34!UBERON:0002780;3.95e-13;41!UBERON:0001890;3.95e-13;41!UBERON:0003528;4.18e-13;34!UBERON:0002020;4.18e-13;34!UBERON:0002791;5.85e-13;32!UBERON:0000956;1.27e-12;25!UBERON:0000203;1.27e-12;25!UBERON:0000073;1.29e-11;53!UBERON:0002616;1.29e-11;53!UBERON:0000955;3.02e-09;68!UBERON:0001017;4.05e-09;75!UBERON:0001016;5.56e-09;83!UBERON:0007023;1.51e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.17e-24,114;UBERON:0001016,2.72e-21,89;UBERON:0001049,5.35e-21,56;UBERON:0005068,5.35e-21,56;UBERON:0006241,5.35e-21,56;UBERON:0007135,5.35e-21,56;UBERON:0001017,2.70e-20,81;UBERON:0000073,6.52e-20,53;UBERON:0002616,6.52e-20,53;UBERON:0004121,4.27e-19,171;UBERON:0000924,4.27e-19,171;UBERON:0006601,4.27e-19,171;UBERON:0000955,5.73e-19,68;UBERON:0006238,5.73e-19,68;UBERON:0002780,8.26e-18,41;UBERON:0001890,8.26e-18,41;UBERON:0003080,8.26e-18,41;UBERON:0006240,8.26e-18,41;UBERON:0011216,2.22e-17,223;UBERON:0010314,1.34e-15,132;UBERON:0001893,3.52e-15,34;UBERON:0002619,4.28e-15,22;UBERON:0003528,4.46e-15,34;UBERON:0002020,4.46e-15,34;UBERON:0001869,8.40e-15,32;UBERON:0002791,3.05e-14,32;UBERON:0002346,3.90e-14,86;UBERON:0001950,4.02e-14,20;UBERON:0003075,4.79e-14,82;UBERON:0007284,4.79e-14,82;UBERON:0010371,1.35e-13,104;UBERON:0004111,6.94e-13,240;UBERON:0000956,1.57e-12,25;UBERON:0000203,1.57e-12,25;UBERON:0003056,2.25e-10,61;UBERON:0000483,5.19e-10,306;UBERON:0000119,1.10e-09,309;UBERON:0000025,2.93e-09,192 | |||
|phase1_expression=18.3495163063262,12.631930909568,19.8745709775319,12.0087958023756,15.6436383049551,20.0637860543085,7.59899634504932,15.1612769622439,14.3652095509911,5.89761447603621,11.1648186875588,10.0483031179879,8.96807725976742,12.7479343548848,16.5698687863958,8.0679017574213,10.8485015044316,4.38186054232424,9.27072317701963,6.40229501999297,4.69201589861782,4.38836610069323,9.15955158819382,8.89683762973747,8.03472893406738,0.305653622991805,0.246301768349837,0.314843125254717,1.96682138424452,1.53531759238885,1.70297735647684,14.7107395916628,15.662707776469,14.4204063965047,0,0,11.1568166947242,1.66198622559563,1.80490002723128,2.17010870715852,0,0.971680998056939,0.257575567634187,0.726991193897824,1.51150377475524,0.970336244751265,0.929716147622738,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0,2.06847408441971,2.5819387343353,1.35426486594342,1.12945403725563,1.63743690034707,0.674170453335254,1.83650335422542,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,1.00499466102697,0.521482918420201,0,1.81619850790011,0,0.632924774881769,0,0,0,0.336985893439485,0.300353785683013,0.32145117339416,0,0,0.182664153764634,1.75996244461323,0,0.889509253863555,0.426730222566507,0.800791974072025,0,0,0,1.1384259382189,0,1.14681968437569,3.96513985737078,3.36305137788922,3.68737718685108,13.1795545976268,9.03924754323079,6.37364646898479,0.167186495390678,12.3850461320764,11.3627473376336,15.5861382726329,0.557052284425868,1.47302953737419,1.32920336750173,0.270803863765016,0.128091319725675,0.260118695119756,1.97325485524411,4.14525026678773,2.31842468588042,9.49034004237187,14.1796638887548,16.7256838087963,0.566546713487831,7.66440987203842,4.81078423675682,5.81945291644857,5.41561204350964,2.60433381542567,0.950452044448374,7.82990619204418,6.39933055772092,2.49861453104692,5.20909954496837,6.56902397536837,7.25784275609037,6.15112450302067,8.97911304073354,24.3806866313962,12.7433163343691,13.8091566791013,12.2889311810753,12.5334477658972,11.7325680358267,17.4962908351242,19.4653948121054,10.6824343395397,7.53879951372717,8.16863506946072,17.6166856544423,5.46442932438813,5.56176664176644,0.97364218096405,1.74129737299267,0.132957960518865,0.476981248610684,0.571994910780128,0,14.3108933304028,10.3228151412735,14.2327605659114,19.2204700254163,10.9069853414576,9.62913146790236,9.40477349415648,19.1228401785303,14.9421830328418,20.4179573786449,7.25092770796465,10.6438094800592,14.8877855104383,11.7652185710678,7.29127753093584,18.6636432113727,21.5548197721123,17.6800024358816,7.66583187329416,10.4419222552494,12.0913150994069,0,0,9.15797509499322,25.3455695364612,10.7635934914893,18.140057771411,14.3418310374407,10.6400514659507,8.97084160227691,7.47242970107935,6.41335625884616,18.3614510885862,18.4553620735473,12.5865665397363,12.7140239221742,16.70910180992,8.20125011418288,14.9836836878554,10.2684927878001,13.7492786107657,22.4299892409591,21.8528474896978,22.1912274589553,18.9863379267051,14.2487808081651,22.4216945151411,13.0680314301026,14.0942149688777,6.37112953356618,7.90479955997862,12.9618807744631,14.3886297852759,22.719257469703,14.4862614890677,11.9530240361618,16.6764245386322,5.67160915800105,18.6565221116416,20.0743945489453,19.4977349066797,17.4052835728953,18.4464027336806,22.4147269839697,17.8672182078326,23.1223575170535,16.0771058515978,23.9812085531909,24.3932231402093,18.2660044205257,14.5553932931812,10.7804745103575,10.5127567232502,15.2676073999004,15.5465288736776,17.4950803187292,13.7830287926443,15.7710424302567,14.6404368015593,14.2015645371057,13.3730050964083,25.1834377762323,0,14.7945415784364,9.66944449467364,12.0735661288315,9.38443326170461,4.8505788016336,4.38320194203064,5.3022426574366,4.08087699109858,2.39667388501647,4.27087114399974,4.71909578560575,3.13954344200554,5.00171304030308,11.0723318193697,5.60967095213783,5.7620361586396,8.82052268313252,12.6755034821831,11.7939266001315,12.4065880403095,0.882926198829301,9.47010976781974,6.51957679134397,22.8280593649941,17.9842805212191,21.1110842064425,14.8141512253647,5.2129328849652,7.27954349695705,4.3299402607582,11.2452492825825,10.8015998696956,6.49649014924832,11.1116523018387,10.0834700684337,6.3216351836742,3.43394464837949,0.246217006087397,1.8720341211139,1.33768046059855,13.1227367581488,10.9188383329259,7.79763034833126,22.3000721530092,24.9945187122007,11.5014803749563,3.4486426652716,12.3267807618516,11.4030463547425,13.6913955746113,11.7405463086533,10.159663086747,14.1335717456563,10.5495702489042,10.2643467613623,8.43185440167253,5.1058319833466,15.4346273620512,10.2039286754278,4.79556075716608,11.0740811589635,19.1322139321511,7.15312891703765,9.298330278116,14.0947201789981,12.4808924293639,6.43018435655355,2.83698264046557,3.99633268524149,18.5871391755592,5.96883765930587,1.64648067356154,8.79487697593085,17.0588135396422,3.95975936466715,18.9906807547539,11.3299349618038,14.09619175667,0,0,0,10.7831184971212,13.7834323000937,28.5273810081437,9.26600362672507,15.4107241912788,12.8923893532725,0.224170287987055,5.51686128565396,4.09692392233083,4.36366323351144,11.1801634657884,15.6167824629146,9.27946575333234,18.4267891867784,15.9484687913291,0.749007023947182,0,0.414415513436035,15.827202431769,9.00306937907419,13.8345162086865,19.9652027069575,18.0213278685133,24.4438743302599,35.8452729877702,14.7463588866582,6.82222512167955,10.3473071292505,7.97070718242524,11.6152576181273,14.3357963872337,4.30762546418029,3.0882908142977,5.58273670531796,4.52999821719095,5.33637789017222,5.15316871458641,4.99306318531491,9.67648938654977,25.555104205334,30.2320087377483,22.4528075546459,29.3438651795555,23.5385334570684,22.0369871966742,23.7468906311986,11.4115173413965,9.76589489222199,14.1258708343752,9.8658341544888,12.7831416305955,9.66875596732978,15.8400111539595,20.5340605327049,7.69256802702865,6.3731908802351,15.6038053801715,4.06079651616671,8.47168708148562,7.0591479225917,1.46139224653261,8.02192379585855,7.96133688496276,8.33459155854927,10.3639639729027,9.25363516141736,4.6060894382455,4.51520796469368,6.37190682612596,1.66215201785745,3.80587083027703,1.09629938322967,0.784306353074702,7.43705362837529,8.85639543389205,9.43597344526479,17.1048079335219,22.8923662045859,31.1885909699823,14.3566384499043,11.0510241826209,22.4957501781823,15.5639856450316,10.9374518151398,11.9732866286381,12.5431280960923,15.0388342815583,13.6315692279375,13.8919402688244,13.888997560891,24.7927373041467,25.7534690269242,55.7667553601333,27.5149163927096,13.015675380324,22.9813013186367,20.2140808346574,8.62494024493049,6.38767236380426,14.7888608652762,12.4167226799626,19.6081094836528,12.281226188869,12.0224181393116,12.2003324111248,3.07077349573601,14.1219866051194,13.6827396608153,10.20433232259,16.9080110128316,10.7069441597061,10.7209286134575,8.28948174450596,3.17020642346017,16.0078213370813,6.82687234725426,10.2359665645139,11.6215161432431,12.6944917609427,11.1710291243433,6.78048699721457,14.8868642757454,9.28814565337708,10.5228212460903,4.05142873986681,18.3650530573057,6.08731130888112,5.88664646389525,7.60578126837052,9.60856059767145,9.726655060299,6.06340787518125,8.51426553769435,11.1887046707762,16.1354497550352,7.20999030154859,10.1481068871045,19.2444225451024,12.0654409596442,21.7781969722645,17.1341717413738,6.88808596273968,3.36942951335251,7.98174276366016,14.7022976132454,1.01489521846434,0.764637207142375,1.70894156152249,3.57347663186684,2.87953591160336,0.648473311192717,1.62009431171434,3.17250070517708,11.4301756106396,22.1370366710572,14.7024129588619,2.78704762688578,6.63638379691646,13.0189573327598,5.7393458182376,5.58822240011887,0.5745161103971,0,13.3094995512568,0,2.28234679033192,5.32711645628279,37.5951715635101,0.169291777801603,6.42352300414798,1.81619736471943,4.68430861459359,0,7.98825987201991,7.15763545255731,7.67506051874779,2.73543333562856,0,9.84699191581699,18.6614418148428,0.33307196799782,8.45922030527097,20.7725999853124,16.7019324369959,14.5632626099416,0,15.0592157807399,21.0095146569167,14.5512693607993,15.3580351049616,31.8127247285215,25.0391561210713,19.5903320840314,0,30.1909333623031,26.4999824373923,11.0513566212459,31.9954589774931,14.522152915306,0.738508832766417,14.9299002077668,14.289067832425,9.66714343248289,2.55786185113436,19.1368206935651,4.7896618469388,22.2273980289274,36.8346443516183,38.684296933492,29.9420697001791,19.2716543203073,8.92091999961196,31.1749817436961,9.67244310426747,0,5.67330436243047,12.7555048099342,10.2061614684139,14.7581245693298,26.5722415744152,22.3103411457005,64.084329253175,58.1646907238242,60.2917142665237,33.7853511617118,14.4888156480257,19.5193241990045,32.242158313091,21.1932223875422,24.2092099607463,29.7995379440443,12.2771530271869,11.803042910081,9.61774730719554,13.8589041764845,0,12.715400767997,11.4686060511108,10.8285917096247,9.01887657861602,7.55197141391292,11.9544851616237,12.7149263184303,9.49491290376122,15.3438839669599,11.3082457147153,16.661925260141,19.9052386215701,18.9299188037146,28.1073866669468,2.96521128680622,3.45979029050208,2.61054873763638,21.9727693517007,27.2876400081588,25.534824584062,5.65609846568565,13.10952946845,9.9539955608978,23.280479768114,29.0377718516793,30.3012034014185,20.9147578570295,20.7446318792,15.3458523267926,11.2991158360221,5.29587129400798,11.3015850626601,15.5314158704846,15.9381345776684,17.1956594536292,6.94238953340524,20.0884414699474,11.4047560620327,18.8704801701393,19.4344216692927,8.22428815957224,11.9866480021344,9.03270027585302,23.0833859242438,23.2996174465561,20.1122859294674,14.9375697864958,11.5254474787734,48.6860020900707,36.1770058059386,14.1079523642699,18.143504552845,11.9885765749278,20.1726584015748,12.0263425974211,20.4198047455738,9.21950707124158,9.69169777410374,16.7342764577925,13.1827079891406,12.238533018543,14.9937379925393,8.66851769704557,19.8138695274231,15.3334024359032,25.5493176133945,15.9013213325384,0,22.0633097005081,25.2076466412852,25.1255558601885,13.7778510344304,12.8767814440971,27.4500892653503,19.3488400761772,24.5003920808834,41.9385418298834,12.7628755337702,10.9613091646951,11.2563918236489,14.3704123011533,5.08039992394707,31.0139579025628,26.5596641917572,15.2715491041768,14.8542591525012,11.216889126788,1.799791132412,8.51182150013745,44.407925917016,13.0819528163714,14.6578615576509,20.0376526675693,19.1136609100126,8.06793026997802,25.9085516381251,21.440859791201,24.497402903521,13.4762324957017,13.5749900438428,13.8275438592203,6.20515984207877,11.9730191562487,11.2466753426594,12.0975495467649,11.8977696096132,13.6293577320617,9.27548222385549,36.8456425630419,20.2315880666316,13.002599679209,16.9155605356001,18.1538601365081,26.5675275618435,33.5533634831228,10.9156524798629,4.74267916555066,10.474163460757,15.3201901864844,39.1692818426021,30.3334771767467,22.6695726804962,30.4921546560118,40.20584864006,53.1640907980192,39.4144835633341,37.056515489124,28.6704597845036,26.7339014203814,23.5966331177257,9.82275308047239,9.24855018919589,11.2220346980819,14.8441973443383,22.1149870516281,6.55668868129634,9.99955097414693,10.4478362020812,12.1530921120557,14.4249523990679,11.5535833217804,10.3142839718556,12.4573571023515,18.5360455401508,14.0644759099812,10.5697296396291,6.20991629956462,12.9030381402599,21.1407462716894,12.8868254207295,13.2705986509074,13.8237691570157,9.39141111261121,10.8185478477997,20.1826762449462,6.10306099806992,12.7294061441792,12.0299823887587,23.6657217538032,16.3219314366433,10.0006941165788,13.7358282073117,17.1742239270619,18.9277347342976,14.8317269413624,20.8008343633678,3.65392008751296,12.2421199776627,9.49242144727719,13.9499921568687,8.41717553082991,3.39681591877069,6.1399533882038,6.00743096215996,10.4173580666294,3.20990637240838,4.61234733458304,4.83602478423678,9.41965864149885,31.6611818787463,1.16916185303633,0.664324201566815,0.327130788511688,14.4148333492422,13.2717370727008,18.1728426088419,0.19998739585493,12.1628571851321,0,12.4853509784704,14.5443700698954,21.9610827119528,20.5285495810881,16.4983738981711,8.51816010033786,16.8274557785809,22.6063951057469,13.9180674562301,13.392219966406,10.9063472547922,12.2901881954114,22.2603045457393,29.8097396104738,8.0057074828547,18.6918250156062,9.49360979794921,36.8033459802713,62.3464935832574,29.532263925573,59.6888619940597,43.1042600539138,40.8027789538886,33.7484099370569,32.8369666596055,16.4888167081723,17.3415493321178,12.4731446994742,15.1338622656943,19.8318689642927,31.7565565987646,24.8645277645343,29.6328693696074,14.724470015357,17.193308247128,8.1191075289241,8.67991162803513,4.73139475894545,49.3024367714281,43.7403735223755,38.0303705562179,45.4057200988373,39.3821862493118,22.4785684411445,23.8181365626861,24.4461029659873,7.41022080309653,17.1424587481052,35.9823582774142,21.8507617525187,33.9216665113433,10.1120701985408,3.22655165156182,22.2934412268644,41.6654463147978,40.0556190997751,8.39176270276174,14.9050078535373,25.5102551764171,18.3825240201722,21.300684411848,42.9184598639463,18.3538452535828,9.555033757741,23.9446422991799,20.0677286900563,1.62737995515375,18.2551185917708,16.8359386593353,21.3432649087928,19.9740618199921,31.1066847816341,20.220685864553,15.3831600949735,15.679266475685,26.6733841620285,10.9971296901144,23.5756853104883,7.64431151181946,20.2458331554004,9.02982149260235,2.92603019957447,31.7240130222068,23.2017943495118,35.9542473714842,29.6283705766075,7.25212336732527,16.1150127880708,26.1624199710651,12.1981768602077,23.4173300667764,7.09525364763366,18.058752997259,14.2063714327572,4.70317296361523,24.2696838536366,28.2811856521951,26.6979515276326,17.228691218971,28.3179337480878,20.2213266478502,7.14277776646887,8.25060966061788,7.29570438251981,13.2129914568187,42.7002794775987,11.0733086031052,24.8314372003816,21.1015470366089,17.2007499781742,12.779496537648,35.1516004287029,49.3076280084626,22.7481541421622,16.3677807993371,15.2517957448368,19.9008218576943,26.6211156402017,27.644189706815,18.1178856446355,37.7358670045332,22.7134794475726,61.2020030902067,25.8228765471146,15.0041822472114,14.2020988982775,28.1917609415985,19.1351042344506,19.1910583710883,24.2825720093015,4.00451240983238,4.84182771507692,19.5109440890267,29.4686342827904,31.7323986664404,21.3362412939022,17.1116650542641,9.56399152807143,15.6354407756034,22.6209042451289,11.8848772172023,16.2225565734127,7.7228912914776,9.97059743383114,14.0784565442073,36.1834674781285,31.3310057303119,31.2905683867191,8.65477312441413,6.09080135376143 | |||
|short_description=p1@ZFYVE9 | |||
}} |
Latest revision as of 12:43, 18 September 2015
Short description: | p1@ZFYVE9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZFYVE9_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_ENST00000287727, ENST00000357206, ENST00000361625, NM_004799, NM_007323, NM_007324, uc001ctn.2, uc001cto.2, uc001ctp.2_5end |
EntrezGene: | ZFYVE9 |
HGNC: | 6775 |
UniProt: | O95405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data