FFCP PHASE1:Hg19::chr2:216236941..216236998,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=163bp_to_ENST00000485567_5end | |||
|cluster_id=chr2:216236941..216236998,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_45_at_FN1_5end | |||
|id=chr2:216236941..216236998,- | |||
|ontology_enrichment_celltype=CL:0000055!1.46e-36!180;CL:0000057!2.40e-22!75;CL:0000680!2.98e-20!57;CL:0000056!2.98e-20!57;CL:0000355!2.98e-20!57;CL:0000183!7.68e-19!59;CL:0000187!9.03e-19!54;CL:0002371!2.51e-16!591;CL:0000393!3.25e-15!60;CL:0000211!3.25e-15!60;CL:0000192!4.20e-14!42;CL:0000514!4.20e-14!42;CL:0000144!4.25e-14!625;CL:0000220!1.76e-13!246;CL:0000222!2.05e-13!119;CL:0002321!5.35e-13!248;CL:0000359!4.91e-12!32;CL:0000048!8.50e-10!430;CL:0000548!1.08e-09!679;CL:0000004!1.08e-09!679;CL:0000255!1.08e-09!679;CL:0000723!1.26e-09!436;CL:0002620!2.87e-09!23;CL:0000012!3.31e-09!682;CL:0002494!7.84e-09!16;CL:0000034!9.06e-09!444;CL:0002334!3.63e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.42e-13;32!CL:0000187;2.54e-11;55!CL:0000134;4.44e-11;55!CL:0002494;9.88e-11;16!CL:0000192;1.39e-10;43!CL:0000057;5.05e-10;73!CL:0000723;6.09e-10;61!CL:0000393;1.34e-09;61!CL:0000211;1.34e-09;61!CL:0002620;3.11e-09;23!CL:0000349;5.56e-09;19!CL:0000048;9.67e-09;58!CL:0002320;2.67e-08;188!CL:0002334;7.14e-08;12!CL:0000034;2.45e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.92e-23,76;CL:0000680,9.81e-23,58;CL:0000056,9.81e-23,58;CL:0000355,9.81e-23,58;CL:0000187,6.80e-21,55;CL:0000048,1.30e-20,427;CL:0000723,2.29e-20,433;CL:0000034,5.75e-19,441;CL:0000393,3.58e-17,61;CL:0000211,3.58e-17,61;CL:0000192,4.52e-15,43;CL:0000514,4.52e-15,43;CL:0000359,8.97e-14,32;CL:0002494,7.89e-11,16;CL:0000222,1.41e-09,121;CL:0002620,2.07e-09,23;CL:0000349,6.18e-09,19;CL:0002320,3.00e-08,361;CL:0002334,1.08e-07,12;CL:0000134,7.16e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;7.37e-12;58!CL:0000514;1.39e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.07e-23!83;UBERON:0002329!7.07e-23!83;UBERON:0003077!7.07e-23!83;UBERON:0003059!7.07e-23!83;UBERON:0007282!7.07e-23!83;UBERON:0009618!7.07e-23!83;UBERON:0007285!7.07e-23!83;UBERON:0004290!1.81e-20!70;UBERON:0000486!1.92e-19!82;UBERON:0005256!3.20e-19!143;UBERON:0001134!2.10e-18!61;UBERON:0002036!2.10e-18!61;UBERON:0003082!2.10e-18!61;UBERON:0002385!8.20e-18!63;UBERON:0001015!8.20e-18!63;UBERON:0000383!8.20e-18!63;UBERON:0004872!3.29e-15!84;UBERON:0002049!3.05e-14!79;UBERON:0007798!3.05e-14!79;UBERON:0003914!3.26e-14!118;UBERON:0000490!4.27e-14!138;UBERON:0002100!8.11e-14!216;UBERON:0004535!1.15e-12!110;UBERON:0001009!1.51e-12!113;UBERON:0001637!2.56e-12!42;UBERON:0003509!2.56e-12!42;UBERON:0004572!2.56e-12!42;UBERON:0001981!4.23e-11!60;UBERON:0007500!4.23e-11!60;UBERON:0004537!4.23e-11!60;UBERON:0006965!4.23e-11!60;UBERON:0000055!1.36e-10!69;UBERON:0004573!2.96e-09!33;UBERON:0004571!2.96e-09!33;UBERON:0000475!9.69e-09!365;UBERON:0003104!1.02e-08!238;UBERON:0009142!1.02e-08!238;UBERON:0000948!1.04e-08!24;UBERON:0005498!1.04e-08!24;UBERON:0004140!1.04e-08!24;UBERON:0009881!1.04e-08!24;UBERON:0004141!1.04e-08!24;UBERON:0003084!1.04e-08!24;UBERON:0007005!1.04e-08!24;UBERON:0004139!1.04e-08!24;UBERON:0004291!1.04e-08!24;UBERON:0000119!1.90e-08!312;UBERON:0000483!3.70e-08!309;UBERON:0007100!3.82e-08!27;UBERON:0000468!6.06e-08!659;UBERON:0004923!1.53e-07!57;UBERON:0003102!1.92e-07!95;UBERON:0002097!7.32e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.79e-10;42!UBERON:0003509;6.79e-10;42!UBERON:0004572;6.79e-10;42!UBERON:0004573;7.27e-09;33!UBERON:0004571;7.27e-09;33!UBERON:0002385;1.50e-08;31!UBERON:0001015;1.50e-08;31!UBERON:0000383;1.50e-08;31!UBERON:0002384;4.30e-08;198!UBERON:0000478;8.64e-08;24!UBERON:0000948;2.63e-07;22!UBERON:0002204;5.10e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.38e-22,73;UBERON:0002329,1.61e-22,71;UBERON:0003059,1.61e-22,71;UBERON:0007282,1.61e-22,71;UBERON:0004290,1.61e-22,71;UBERON:0009618,1.61e-22,71;UBERON:0003077,6.42e-22,72;UBERON:0007285,6.42e-22,72;UBERON:0007503,3.15e-21,78;UBERON:0001134,3.36e-21,62;UBERON:0002036,3.36e-21,62;UBERON:0003082,3.36e-21,62;UBERON:0002385,5.87e-20,64;UBERON:0001015,5.87e-20,64;UBERON:0000383,5.87e-20,64;UBERON:0000486,5.02e-19,83;UBERON:0005256,1.98e-15,122;UBERON:0004872,6.93e-14,83;UBERON:0001637,1.60e-13,42;UBERON:0003509,1.60e-13,42;UBERON:0004572,1.60e-13,42;UBERON:0003104,3.45e-13,160;UBERON:0009142,3.45e-13,160;UBERON:0000490,6.71e-12,148;UBERON:0000926,8.20e-12,315;UBERON:0004120,8.20e-12,315;UBERON:0006603,8.20e-12,315;UBERON:0004535,7.32e-11,109;UBERON:0001009,1.51e-10,112;UBERON:0002049,1.55e-10,78;UBERON:0007798,1.55e-10,78;UBERON:0004573,1.01e-09,33;UBERON:0004571,1.01e-09,33;UBERON:0003914,1.49e-09,117;UBERON:0007500,5.24e-09,59;UBERON:0001981,5.24e-09,59;UBERON:0004537,5.24e-09,59;UBERON:0006965,5.24e-09,59;UBERON:0002384,7.95e-09,371;UBERON:0000948,1.65e-08,24;UBERON:0005498,1.65e-08,24;UBERON:0004140,1.65e-08,24;UBERON:0009881,1.65e-08,24;UBERON:0004141,1.65e-08,24;UBERON:0003084,1.65e-08,24;UBERON:0007005,1.65e-08,24;UBERON:0004139,1.65e-08,24;UBERON:0004291,1.65e-08,24;UBERON:0004923,4.75e-08,66;UBERON:0000055,6.46e-08,68;UBERON:0002097,8.40e-08,41;UBERON:0000478,9.23e-08,24;UBERON:0007100,1.33e-07,27;UBERON:0002199,1.73e-07,46;UBERON:0002416,1.73e-07,46;UBERON:0002100,1.92e-07,199;UBERON:0005631,8.48e-07,14;UBERON:0000158,8.48e-07,14 | |||
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| |||
|short_description=p45@FN1 | |||
}} |
Latest revision as of 01:58, 20 September 2015
Short description: | p45@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 163bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.92e-23 | 76 |
muscle precursor cell | 9.81e-23 | 58 |
myoblast | 9.81e-23 | 58 |
multi-potent skeletal muscle stem cell | 9.81e-23 | 58 |
muscle cell | 6.80e-21 | 55 |
multi fate stem cell | 1.30e-20 | 427 |
somatic stem cell | 2.29e-20 | 433 |
stem cell | 5.75e-19 | 441 |
electrically responsive cell | 3.58e-17 | 61 |
electrically active cell | 3.58e-17 | 61 |
smooth muscle cell | 4.52e-15 | 43 |
smooth muscle myoblast | 4.52e-15 | 43 |
vascular associated smooth muscle cell | 8.97e-14 | 32 |
cardiocyte | 7.89e-11 | 16 |
mesodermal cell | 1.41e-09 | 121 |
skin fibroblast | 2.07e-09 | 23 |
extraembryonic cell | 6.18e-09 | 19 |
connective tissue cell | 3.00e-08 | 361 |
preadipocyte | 1.08e-07 | 12 |
mesenchymal cell | 7.16e-07 | 354 |