FFCP PHASE1:Hg19::chr2:216259356..216259399,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt=Q6N084 | |||
|association_with_transcript=-1bp_to_BX640638_5end | |||
|cluster_id=chr2:216259356..216259399,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_17_at_FN1_5end | |||
|id=chr2:216259356..216259399,- | |||
|ontology_enrichment_celltype=CL:0000055!4.39e-35!180;CL:0000057!9.21e-24!75;CL:0000680!5.70e-15!57;CL:0000056!5.70e-15!57;CL:0000355!5.70e-15!57;CL:0000183!2.17e-14!59;CL:0000187!1.24e-13!54;CL:0002371!6.97e-13!591;CL:0000222!8.45e-12!119;CL:0000220!1.08e-11!246;CL:0002321!2.41e-11!248;CL:0000393!3.07e-11!60;CL:0000211!3.07e-11!60;CL:0000144!5.00e-11!625;CL:0000192!1.76e-09!42;CL:0000514!1.76e-09!42;CL:0002620!4.38e-09!23;CL:0000359!3.65e-08!32;CL:0002334!4.70e-08!12;CL:0002494!1.60e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.80e-12;55!CL:0000723;3.98e-11;61!CL:0000057;4.39e-11;73!CL:0000048;2.99e-10;58!CL:0002620;3.18e-10;23!CL:0002320;2.70e-09;188!CL:0000187;5.24e-09;55!CL:0002334;6.00e-09;12!CL:0000349;7.59e-09;19!CL:0000359;8.92e-09;32!CL:0000034;1.22e-08;69!CL:0002494;2.47e-08;16!CL:0000192;5.91e-08;43!CL:0000393;4.77e-07;61!CL:0000211;4.77e-07;61!CL:0000499;8.32e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.37e-27,76;CL:0000680,8.58e-17,58;CL:0000056,8.58e-17,58;CL:0000355,8.58e-17,58;CL:0000048,4.94e-16,427;CL:0000723,1.15e-15,433;CL:0000187,2.77e-15,55;CL:0000034,1.23e-14,441;CL:0000393,2.07e-12,61;CL:0000211,2.07e-12,61;CL:0000222,2.43e-11,121;CL:0000192,1.34e-10,43;CL:0000514,1.34e-10,43;CL:0002321,2.71e-10,250;CL:0002620,3.09e-10,23;CL:0000359,5.06e-09,32;CL:0002334,6.74e-09,12;CL:0000349,8.20e-09,19;CL:0002494,2.68e-08,16;CL:0002320,4.35e-07,361;CL:0000499,8.39e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;2.25e-09;58!CL:0000514;5.91e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.35e-20!143;UBERON:0000914!2.39e-18!83;UBERON:0002329!2.39e-18!83;UBERON:0003077!2.39e-18!83;UBERON:0003059!2.39e-18!83;UBERON:0007282!2.39e-18!83;UBERON:0009618!2.39e-18!83;UBERON:0007285!2.39e-18!83;UBERON:0004290!3.47e-16!70;UBERON:0003914!4.93e-15!118;UBERON:0000486!1.58e-14!82;UBERON:0004872!7.19e-14!84;UBERON:0001134!2.27e-13!61;UBERON:0002036!2.27e-13!61;UBERON:0003082!2.27e-13!61;UBERON:0002385!3.20e-13!63;UBERON:0001015!3.20e-13!63;UBERON:0000383!3.20e-13!63;UBERON:0002100!1.25e-12!216;UBERON:0000490!1.31e-12!138;UBERON:0002049!5.00e-12!79;UBERON:0007798!5.00e-12!79;UBERON:0000475!1.18e-11!365;UBERON:0000468!5.93e-11!659;UBERON:0002199!1.03e-10!45;UBERON:0002416!1.03e-10!45;UBERON:0000119!2.05e-10!312;UBERON:0004535!3.71e-10!110;UBERON:0003102!3.85e-10!95;UBERON:0001009!4.40e-10!113;UBERON:0001637!4.77e-10!42;UBERON:0003509!4.77e-10!42;UBERON:0004572!4.77e-10!42;UBERON:0000483!5.28e-10!309;UBERON:0000055!2.38e-09!69;UBERON:0001981!6.95e-09!60;UBERON:0007500!6.95e-09!60;UBERON:0004537!6.95e-09!60;UBERON:0006965!6.95e-09!60;UBERON:0002097!7.01e-09!40;UBERON:0003104!1.39e-08!238;UBERON:0009142!1.39e-08!238;UBERON:0000481!1.54e-08!347;UBERON:0004923!5.17e-08!57;UBERON:0004573!7.35e-08!33;UBERON:0004571!7.35e-08!33;UBERON:0000948!2.17e-07!24;UBERON:0005498!2.17e-07!24;UBERON:0004140!2.17e-07!24;UBERON:0009881!2.17e-07!24;UBERON:0004141!2.17e-07!24;UBERON:0003084!2.17e-07!24;UBERON:0007005!2.17e-07!24;UBERON:0004139!2.17e-07!24;UBERON:0004291!2.17e-07!24;UBERON:0000477!4.17e-07!286;UBERON:0000467!4.55e-07!625;UBERON:0001013!5.72e-07!14;UBERON:0007100!5.94e-07!27;UBERON:0000480!6.61e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.55e-09;198!UBERON:0001637;1.95e-08;42!UBERON:0003509;1.95e-08;42!UBERON:0004572;1.95e-08;42!UBERON:0002199;3.02e-08;46!UBERON:0002416;3.02e-08;46!UBERON:0002097;3.48e-08;41!UBERON:0004573;4.19e-08;33!UBERON:0004571;4.19e-08;33!UBERON:0001013;1.06e-07;14!UBERON:0000478;2.99e-07;24!UBERON:0002385;9.67e-07;31!UBERON:0001015;9.67e-07;31!UBERON:0000383;9.67e-07;31!UBERON:0000947;9.93e-07;21!UBERON:0010191;9.93e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.88e-18,78;UBERON:0002329,4.00e-18,71;UBERON:0003059,4.00e-18,71;UBERON:0007282,4.00e-18,71;UBERON:0004290,4.00e-18,71;UBERON:0009618,4.00e-18,71;UBERON:0007524,4.71e-18,73;UBERON:0005256,5.49e-18,122;UBERON:0003077,1.57e-17,72;UBERON:0007285,1.57e-17,72;UBERON:0003104,8.78e-17,160;UBERON:0009142,8.78e-17,160;UBERON:0000486,1.09e-15,83;UBERON:0001134,6.03e-15,62;UBERON:0002036,6.03e-15,62;UBERON:0003082,6.03e-15,62;UBERON:0000490,1.04e-14,148;UBERON:0002385,1.83e-14,64;UBERON:0001015,1.83e-14,64;UBERON:0000383,1.83e-14,64;UBERON:0003914,3.65e-13,117;UBERON:0004872,6.41e-13,83;UBERON:0002199,1.98e-12,46;UBERON:0002416,1.98e-12,46;UBERON:0001637,2.75e-11,42;UBERON:0003509,2.75e-11,42;UBERON:0004572,2.75e-11,42;UBERON:0002049,6.32e-11,78;UBERON:0007798,6.32e-11,78;UBERON:0003102,1.52e-10,99;UBERON:0002097,2.42e-10,41;UBERON:0004535,2.69e-10,109;UBERON:0002100,6.38e-10,199;UBERON:0001009,1.03e-09,112;UBERON:0000926,1.27e-09,315;UBERON:0004120,1.27e-09,315;UBERON:0006603,1.27e-09,315;UBERON:0004573,8.17e-09,33;UBERON:0004571,8.17e-09,33;UBERON:0000055,3.29e-08,68;UBERON:0004923,5.48e-08,66;UBERON:0007500,7.81e-08,59;UBERON:0001981,7.81e-08,59;UBERON:0004537,7.81e-08,59;UBERON:0006965,7.81e-08,59;UBERON:0000119,8.81e-08,309;UBERON:0001013,1.13e-07,14;UBERON:0000483,2.09e-07,306;UBERON:0002384,2.61e-07,371;UBERON:0000478,3.21e-07,24;UBERON:0000948,8.01e-07,24;UBERON:0005498,8.01e-07,24;UBERON:0004140,8.01e-07,24;UBERON:0009881,8.01e-07,24;UBERON:0004141,8.01e-07,24;UBERON:0003084,8.01e-07,24;UBERON:0007005,8.01e-07,24;UBERON:0004139,8.01e-07,24;UBERON:0004291,8.01e-07,24;UBERON:0005631,9.22e-07,14;UBERON:0000158,9.22e-07,14 | |||
|phase1_expression=36.880710991923,93.9901299881416,34.251920195321,44.0322512753774,14.3027550216732,43.6169262050184,22.796989035148,18.3198763293781,3.65659879479774,1.47440361900905,0.697801167972428,12.2327168392896,27.6955327139876,7.05468211872266,15.90707403494,16.1358035148426,11.4511960324556,8.76372108464848,7.80692478064811,2.21617904538218,3.87601313364081,4.07491137921514,1.43117993565528,1.09499540058307,4.5195350254129,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,343.767681502686,38.9006498628109,9.33396701457771,5.78302643815306,16.0428131403485,14.0501123391999,219.498921386103,377.142024484543,1.70162670895322,7.53879951372717,6.14843499851882,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,1.39133685156694,2.58070378531837,1.38856200643038,7.34900324501212,6.71199097935849,10.7296036356626,3.34391946458897,0.775250277507987,4.62496141492723,5.69025041699939,1.20848795132744,0,1.95249646038536,0,25.1144003843345,0.982297011124877,0.44905874525234,0.788280363383256,0,1.89853131913626,2.5648244150257,0,0,0.872188104285069,70.0730451890399,30.2646922878346,51.3747621555289,112.439955333535,34.757501455439,13.4562624034154,37.3621485053967,53.2801904581065,17.4278179823869,20.4760221545926,17.1634998269132,34.8122083583342,84.1216849740798,3.28050004567315,41.5172902184326,5.70471821544449,32.4303636797408,5.75429043354448,5.6655530528846,5.05622904128095,5.30800845262722,6.01888154827663,7.95608515053394,7.12801714369232,13.8469480395992,18.2032272387605,9.3420358436111,5.72342787443825,9.63412603014124,1.38532057742091,6.58466431321257,12.8724874235588,9.01428353439581,9.41487120228174,40.9008369370605,17.5117058831225,36.4522869994446,39.9121157792255,18.6525077921574,49.2093431487152,18.611685633159,34.7679244417008,23.5797552490101,61.0889733670757,23.1965744578594,21.1756334432644,49.701342952326,11.2842350014957,8.30846902321389,3.67195621010264,6.54590689418003,0,0.121973706129595,0,0.929551542956147,1.34759371519982,1.51392510525377,0,12.5159625863853,49.5295522408522,13.8134921352481,74.7632364131486,38.259612528488,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,12.6217596423101,12.7587943512734,14.7008711385542,19.0132552232746,15.725235466842,2.36315962672562,0,3.68965315629341,3.60292401626904,10.7555279700453,4.49607013030478,0.100528972411631,0.555530670951178,1.95484983186195,4.15973914111831,4.3299402607582,0.231860809950154,44.9675298923197,1.44366447761074,3.24089858803628,3.99533719692656,0,0,0,0,0,1.87467667973554,11.4227847175224,1.41775097242386,13.7024539735358,9.30028603244678,14.9519244874432,0,0,0.207328115540772,0,0,0,0.763976851116555,0,1.71072446022705,6.47813204030938,0.901029173531752,0.857479297891735,3.36393253036082,8.7192013766656,6.38043086642265,11.6344544182,50.0719024192635,18.596660556232,4.78688609852767,5.2003718455683,10.80270971901,14.1849132023278,10.9233093396601,5.86209773998405,17.3638913725262,7.40916303102692,5.86325131728723,4.26470338491055,8.71147060226772,3.61727252471503,5.22920075160176,1.69954085009497,0,0,8.43335757932127,27.0776086705488,35.6072001085753,4.27910715122155,15.7811624267661,44.999314638534,15.7573647651108,0,0,0,0,0,0,0,0,0,0,0,0,13.0052981222288,42.5144942900725,13.0207211375873,54.4883657210715,131.323735754711,36.5869602878728,47.4422730720488,12.6397361885642,15.9185252839189,20.694614258501,11.2918351751024,14.933902651878,10.512917350638,9.20265440074881,13.0394501048125,0,0,0,2.12189300012382,19.9722527412596,19.0505884797699,71.7031564596265,71.359817578949,113.667338245395,41.5170843588471,47.0770669141367,87.1828252598353,40.0728779401476,37.3187459002426,35.8674685132517,10.0195130336847,14.0198695879578,12.3183001167557,4.3509401852984,57.1443440364362,0.184161977871793,3.4444334449382,12.0180170884433,11.1455752715511,0.451199612907412,2.84956747286335,3.13739907670742,1.46139224653261,3.0609972378934,1.13733384070897,1.53084334748864,13.3867867983326,12.3381802152231,5.1479823133332,5.01689773854853,0.254876273045038,0,3.1342465661105,0,0,0,2.29610251989794,0.976135183992909,5.15205058238611,0.27470839445503,0,4.01985876597321,5.20048196829217,17.6752322828576,9.76374254750432,10.9374518151398,13.047812351721,9.51072350143261,29.8628280733801,39.0094906629275,15.4260195623143,10.5948122419617,24.2968825580638,14.7986351871132,11.8679822619963,12.138933702666,9.29691098594571,150.795114131877,9.0614845120878,5.23657086299351,7.45228442443831,3.47973196830029,8.52491407878032,2.00374841438788,5.21021717103534,13.2879358381865,8.19709833872447,3.32667128704734,28.6719121982727,4.45484547096312,8.63443504219153,5.93579110024939,5.76527762445715,4.3590588867904,3.43710218674637,14.2659289055707,2.10629228119491,2.92580243453754,7.7988316682011,5.28250733783777,3.54899769660763,10.8882182604359,37.2926784846801,5.51365343546124,13.9322184800656,8.33056681982149,16.2057149594673,12.462000288886,10.3484292250979,8.36523444869325,5.07052084558035,4.01551786171344,7.36867807598409,16.7635394196188,0.709522128141196,16.0441802826225,32.9294892959902,3.79473173765715,4.19921664293979,0.577332676353072,0,1.08890984861323,5.55448424582997,0.43050537267123,0,0.886860307073351,4.13502120372527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0.568272293612826,38.4378620427681,3.26661148915902,15.6651958070608,0,0.281338832821026,42.8538514338188,0,0,8.567663494796,0.276283915531148,0,0.102268682502155,0,112.907370321236,0.179736702294654,0,0,4.34030984802508,0,4.44547960578548,0.969332746095218,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0,0,0.923403102045565,9.2293065236071,0,0,0,198.737722512986,16.2127740321296,831.53425058907,0,0,0,0,0,0,0,0,1.68798451622422,0.163232808159148,2.96841450011276,0,1.99052386215701,0.442287822516696,1.83309043480088,0,0,0,0,0,0,0,0,0,13.4158696968793,1.20990716048664,0.61214552326098,2.0851571277401,0,0,0.664653872707185,0.992975867626496,0.941798755221676,0,0.284609546029793,0,0,0,0.435296032902013,2.44617335538842,0,0,0,0,1.93978032976839,0.0882561266915003,1.58186518546373,2.32971271899477,0.397429223405979,0.126621591911757,0,0.480952921509202,0.640358984218058,4.39581141080687,0,0.114536596165916,0.857974989309823,0,0.124252535565433,0,0,0,0,3.17845648891671,0,0,0,9.45483971123906,0,4.46851842035607,0.687481272035051,0.717873024576814,0.798716001995964,1.28767814440971,0.669514372325618,0.739018197353989,54.0449825313605,1.16495949527454,5.82995549073455,6.67568452887448,7.00996856083523,3.54338933453096,0,0,0.408610218334727,0.160753148465019,0.412618309791701,1.66176135211674,0,0,0,0,0.315222829196793,0.524545881349981,0.105600336519406,4.48218348332112,0,2.1440859791201,1.32418394073086,0,17.9189868578725,12.0991008768177,26.7801635289715,0,0,32.2033361174447,0.566560457600628,3.95691030930823,5.30027555648885,0.129282956361551,0.52893040697076,0.171086837884329,0,2.66968531419237,2.67247318669432,9.94173732833269,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.372578417648301,0.138348634936231,0,1.06154382279153,1.14186133417987,3.2937214757744,0,0,25.5225712936555,49.5472216876116,42.1652454741986,40.342840123594,47.2947655294841,48.9396171878095,26.3166078656462,59.2825221151897,10.5697296396291,6.94919204951279,10.0356963313133,11.2450778040901,9.62630332632808,25.711784886133,49.180717193229,30.2612135850806,5.55953153289708,13.3281824259078,12.2061219961398,13.4568007809894,19.2264897106054,40.8349708693074,41.0038765359574,7.60052752859992,17.1697852591396,14.4802280169345,5.04739592914604,0.963099152036517,0,0.260994291965212,2.493765180635,2.31522474323834,4.89473409012935,4.47722102703719,0.617602894321944,0.657852148736121,1.76689145945881,0,0.506827321959218,0,0,0.303859956177382,0.138258436151731,0,0,0,5.89697727923543,0.983091635014877,0,0,0,0,0,1.47284760201473,0.279759015438889,1.24415452006595,0,0,26.7352101155024,0,0.678930119816101,4.46407332213534,6.19678821295011,0,14.6282001300573,0,0,28.2140754952547,1.2249819094128,0.0642292250964595,0,0.478901577171454,0.615349092722265,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0.346576998451015,14.8739017232195,0.690359926060101,0.596748666348824,0.300841313397029,32.8779261986738,0,0,4.42184177277261,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0.548257766857182,3.47347824872506,5.9796223082271,0,0,0.336283722218824,0,0,11.1764986404925,0,14.5764808021806,0.0679697329768317,0.328863867814245,0,0.556157009460346,0.470958557103084,0,0,5.47895232305697,0.215927591218621,2.38875843943525,0.142953088353313,0,0,0.869291361512897,6.41369091784202,12.0185375214561,10.4138271027309,3.45629830907046,0,0.946656005844523,0.852134047591577,30.060480563556,12.8299846384668,9.61639795559392,8.5998504507969,0,0,0,0,0.307988420568741,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0.437119121007915,0,3.67722482630858,0,1.17785080268967,0,2.9585900930838,27.868046808802,0,0.0644578879735772,0,0,7.41079230602953,0,0.730336388246517,0,0.286679166302903,0,0.135982980381829,0.436350690340377,2.645134202577,52.0793025433452,9.24351257262837,28.5533531001701,0,0.109265571963696,0.760191006068622,0,0,0.0918948995348449,0,0.378893491091197,0,0,0.20686599172379,0.852935927603924,0.714193294391221,0.258355639344024,0.124149428591716,2.01837352645104,0.0636471582781649,0.606351566874658,0.870866991587845,1.36893320434112,0.134704106029175,0.573777643141411,1.66330178273007,0.569822880276821,0,3.8614456457388,0,9.38563769613817,0.244482888365733,2.03448089157869,0,0.805095174364105,0 | |||
|short_description=p17@FN1 | |||
}} |
Latest revision as of 03:18, 20 September 2015
Short description: | p17@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -1bp_to_BX640638_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | Q6N084 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.37e-27 | 76 |
muscle precursor cell | 8.58e-17 | 58 |
myoblast | 8.58e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.58e-17 | 58 |
multi fate stem cell | 4.94e-16 | 427 |
somatic stem cell | 1.15e-15 | 433 |
muscle cell | 2.77e-15 | 55 |
stem cell | 1.23e-14 | 441 |
electrically responsive cell | 2.07e-12 | 61 |
electrically active cell | 2.07e-12 | 61 |
mesodermal cell | 2.43e-11 | 121 |
smooth muscle cell | 1.34e-10 | 43 |
smooth muscle myoblast | 1.34e-10 | 43 |
embryonic cell | 2.71e-10 | 250 |
skin fibroblast | 3.09e-10 | 23 |
vascular associated smooth muscle cell | 5.06e-09 | 32 |
preadipocyte | 6.74e-09 | 12 |
extraembryonic cell | 8.20e-09 | 19 |
cardiocyte | 2.68e-08 | 16 |
connective tissue cell | 4.35e-07 | 361 |
stromal cell | 8.39e-07 | 28 |