FFCP PHASE1:Mm9::chr16:49856460..49856493,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=601|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:49856460..49856493,-|id=chr16:49856460..49856493,-|ontology_enrichment_celltype=CL:0000838!1.55e-15!12;CL:0000084!4.53e-15!11;CL:0000827!4.53e-15!11;CL:0000542!4.96e-14!13;CL:0000051!4.96e-14!13;CL:0000791!2.02e-12!9;CL:0000789!2.02e-12!9;CL:0002420!2.02e-12!9;CL:0002419!2.02e-12!9;CL:0000790!2.02e-12!9;CL:0000624!3.91e-11!8;CL:0000988!2.97e-10!32;CL:0002032!2.97e-10!32;CL:0000037!2.97e-10!32;CL:0000566!2.97e-10!32;CL:0000837!2.97e-10!32;CL:0002031!6.81e-10!25;CL:0000738!8.11e-10!17;CL:0002087!8.11e-10!17;CL:0000893!1.17e-08!6;CL:0002489!1.17e-08!6;CL:0000898!1.17e-08!6;CL:0000809!1.17e-08!6;CL:0000810!1.17e-08!6;CL:0000895!1.17e-08!6;CL:0000808!1.17e-08!6;CL:0000894!1.17e-08!6;CL:0000806!1.17e-08!6;CL:0000807!1.17e-08!6;CL:0000805!1.17e-08!6;CL:0002425!1.17e-08!6;CL:0002436!1.17e-08!6;CL:0002427!1.17e-08!6;CL:0002428!1.17e-08!6;CL:0002429!1.17e-08!6;CL:0002433!1.17e-08!6;CL:0002431!1.17e-08!6;CL:0002432!1.17e-08!6;CL:0002320!2.87e-07!46;CL:0000134!2.87e-07!46|ontology_enrichment_celltype_v019_2=CL:0000084,9.89e-44,11;CL:0000827,9.89e-44,11;CL:0000838,5.09e-40,12;CL:0000542,7.05e-37,13;CL:0000051,7.05e-37,13;CL:0000791,2.64e-32,9;CL:0000789,2.64e-32,9;CL:0002420,2.64e-32,9;CL:0002419,2.64e-32,9;CL:0000790,2.64e-32,9;CL:0000738,5.33e-28,17;CL:0002087,5.33e-28,17;CL:0000624,7.60e-27,8;CL:0002031,9.61e-19,25;CL:0000988,1.04e-17,32;CL:0002032,1.04e-17,32;CL:0000037,1.04e-17,32;CL:0000837,1.04e-17,32;CL:0000893,1.32e-16,6;CL:0002489,1.32e-16,6;CL:0000898,1.32e-16,6;CL:0000809,1.32e-16,6;CL:0000810,1.32e-16,6;CL:0000895,1.32e-16,6;CL:0000808,1.32e-16,6;CL:0000894,1.32e-16,6;CL:0000806,1.32e-16,6;CL:0000807,1.32e-16,6;CL:0000805,1.32e-16,6;CL:0002425,1.32e-16,6;CL:0002436,1.32e-16,6;CL:0002427,1.32e-16,6;CL:0002428,1.32e-16,6;CL:0002429,1.32e-16,6;CL:0002433,1.32e-16,6;CL:0002431,1.32e-16,6;CL:0002432,1.32e-16,6;CL:0002320,1.60e-14,46;CL:0000134,1.60e-14,46;CL:0000219,3.60e-12,54;CL:0000034,7.71e-09,97;CL:0000625,2.11e-07,1;CL:0000815,3.20e-07,1;CL:0000792,3.20e-07,1;CL:0000213,4.21e-07,1;CL:0002078,4.21e-07,1;CL:0000115,4.21e-07,1;CL:0002262,4.21e-07,1;CL:1000398,4.21e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.20e-19!29;UBERON:0005057!6.91e-18!51;UBERON:0002370!2.16e-17!23;UBERON:0000974!2.16e-17!23;UBERON:0004807!2.16e-17!23;UBERON:0005058!2.16e-17!23;UBERON:0003351!2.16e-17!23;UBERON:0009113!2.16e-17!23;UBERON:0003295!2.16e-17!23;UBERON:0009722!2.16e-17!23;UBERON:0005562!2.16e-17!23;UBERON:0007690!2.16e-17!23;UBERON:0006562!2.16e-16!24;UBERON:0003408!2.16e-16!24;UBERON:0001557!2.16e-16!24;UBERON:0001042!2.16e-16!24;UBERON:0008814!2.16e-16!24;UBERON:0009145!2.16e-16!24;UBERON:0002405!6.79e-15!70;UBERON:0002390!6.35e-14!45;UBERON:0003061!6.35e-14!45;UBERON:0000072!7.46e-14!27;UBERON:0002193!1.39e-13!48;UBERON:0003929!3.59e-12!55;UBERON:0002368!3.18e-11!60;UBERON:0005911!4.47e-11!69;UBERON:0000065!7.59e-11!41;UBERON:0001004!2.03e-10!42;UBERON:0000063!2.39e-10!35;UBERON:0002530!1.14e-09!65;UBERON:0000490!1.30e-09!66;UBERON:0000077!2.75e-08!97;UBERON:0001041!4.92e-08!92;UBERON:0000949!6.80e-08!72;UBERON:0002384!2.87e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.60e-14,46;UBERON:0002370,5.33e-09,23;UBERON:0000974,5.33e-09,23;UBERON:0004807,5.33e-09,23;UBERON:0005058,5.33e-09,23;UBERON:0003351,5.33e-09,23;UBERON:0009113,5.33e-09,23;UBERON:0003295,5.33e-09,23;UBERON:0009722,5.33e-09,23;UBERON:0005562,5.33e-09,23;UBERON:0007690,5.33e-09,23;UBERON:0006562,1.31e-08,24;UBERON:0003408,1.31e-08,24;UBERON:0001557,1.31e-08,24;UBERON:0001042,1.31e-08,24;UBERON:0008814,1.31e-08,24;UBERON:0009145,1.31e-08,24;UBERON:0000077,1.00e-07,35;UBERON:0000072,1.31e-07,27;UBERON:0002394,4.21e-07,1;UBERON:0001281,4.21e-07,1;UBERON:0000353,4.21e-07,1;UBERON:0003497,4.21e-07,1;UBERON:0003909,4.21e-07,1;UBERON:0003928,4.21e-07,1;UBERON:0003835,4.21e-07,1;UBERON:0003513,4.21e-07,1;UBERON:0001280,4.21e-07,1;UBERON:0004647,4.21e-07,1;UBERON:0002294,4.21e-07,1;UBERON:0001173,4.21e-07,1;UBERON:0004912,4.21e-07,1;UBERON:0005171,4.21e-07,1;UBERON:0004177,4.68e-07,29;UBERON:0005057,4.68e-07,29|phase1_expression=0,0,0,0,0,0,0.233612640595526,2.96983643915625,8.869689495555,7.49006484230379,0.856089841127525,0.558405112967355,3.76641605848653,3.4968160967599,0.333109761815663,0.202475267389826,0,0.473193248037357,0.274228867211478,0,0,9.33334941288322,7.31359409589019,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,1.07833612055328,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.811440485554012,0.72353147925725,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0.341741761595705,0,0,0.376736914009382,0.683471138605126,0.686334519619568,1.18984900995699,0.559805809294632,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.41907650703115,1.02710957164827,0.909445760844565,0.895133478337407,0.39736270956253,0.480781798079875,0.443068581523732,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.673482891482306,0.584384510907845,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr16:49856460..49856493,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=601 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:49856460..49856493,- | |||
|description=CAGE_peak_at_chr16:49856460..49856493,- | |||
|id=chr16:49856460..49856493,- | |||
|ontology_enrichment_celltype=CL:0000838!1.55e-15!12;CL:0000084!4.53e-15!11;CL:0000827!4.53e-15!11;CL:0000542!4.96e-14!13;CL:0000051!4.96e-14!13;CL:0000791!2.02e-12!9;CL:0000789!2.02e-12!9;CL:0002420!2.02e-12!9;CL:0002419!2.02e-12!9;CL:0000790!2.02e-12!9;CL:0000624!3.91e-11!8;CL:0000988!2.97e-10!32;CL:0002032!2.97e-10!32;CL:0000037!2.97e-10!32;CL:0000566!2.97e-10!32;CL:0000837!2.97e-10!32;CL:0002031!6.81e-10!25;CL:0000738!8.11e-10!17;CL:0002087!8.11e-10!17;CL:0000893!1.17e-08!6;CL:0002489!1.17e-08!6;CL:0000898!1.17e-08!6;CL:0000809!1.17e-08!6;CL:0000810!1.17e-08!6;CL:0000895!1.17e-08!6;CL:0000808!1.17e-08!6;CL:0000894!1.17e-08!6;CL:0000806!1.17e-08!6;CL:0000807!1.17e-08!6;CL:0000805!1.17e-08!6;CL:0002425!1.17e-08!6;CL:0002436!1.17e-08!6;CL:0002427!1.17e-08!6;CL:0002428!1.17e-08!6;CL:0002429!1.17e-08!6;CL:0002433!1.17e-08!6;CL:0002431!1.17e-08!6;CL:0002432!1.17e-08!6;CL:0002320!2.87e-07!46;CL:0000134!2.87e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.89e-44,11;CL:0000827,9.89e-44,11;CL:0000838,5.09e-40,12;CL:0000542,7.05e-37,13;CL:0000051,7.05e-37,13;CL:0000791,2.64e-32,9;CL:0000789,2.64e-32,9;CL:0002420,2.64e-32,9;CL:0002419,2.64e-32,9;CL:0000790,2.64e-32,9;CL:0000738,5.33e-28,17;CL:0002087,5.33e-28,17;CL:0000624,7.60e-27,8;CL:0002031,9.61e-19,25;CL:0000988,1.04e-17,32;CL:0002032,1.04e-17,32;CL:0000037,1.04e-17,32;CL:0000837,1.04e-17,32;CL:0000893,1.32e-16,6;CL:0002489,1.32e-16,6;CL:0000898,1.32e-16,6;CL:0000809,1.32e-16,6;CL:0000810,1.32e-16,6;CL:0000895,1.32e-16,6;CL:0000808,1.32e-16,6;CL:0000894,1.32e-16,6;CL:0000806,1.32e-16,6;CL:0000807,1.32e-16,6;CL:0000805,1.32e-16,6;CL:0002425,1.32e-16,6;CL:0002436,1.32e-16,6;CL:0002427,1.32e-16,6;CL:0002428,1.32e-16,6;CL:0002429,1.32e-16,6;CL:0002433,1.32e-16,6;CL:0002431,1.32e-16,6;CL:0002432,1.32e-16,6;CL:0002320,1.60e-14,46;CL:0000134,1.60e-14,46;CL:0000219,3.60e-12,54;CL:0000034,7.71e-09,97;CL:0000625,2.11e-07,1;CL:0000815,3.20e-07,1;CL:0000792,3.20e-07,1;CL:0000213,4.21e-07,1;CL:0002078,4.21e-07,1;CL:0000115,4.21e-07,1;CL:0002262,4.21e-07,1;CL:1000398,4.21e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.20e-19!29;UBERON:0005057!6.91e-18!51;UBERON:0002370!2.16e-17!23;UBERON:0000974!2.16e-17!23;UBERON:0004807!2.16e-17!23;UBERON:0005058!2.16e-17!23;UBERON:0003351!2.16e-17!23;UBERON:0009113!2.16e-17!23;UBERON:0003295!2.16e-17!23;UBERON:0009722!2.16e-17!23;UBERON:0005562!2.16e-17!23;UBERON:0007690!2.16e-17!23;UBERON:0006562!2.16e-16!24;UBERON:0003408!2.16e-16!24;UBERON:0001557!2.16e-16!24;UBERON:0001042!2.16e-16!24;UBERON:0008814!2.16e-16!24;UBERON:0009145!2.16e-16!24;UBERON:0002405!6.79e-15!70;UBERON:0002390!6.35e-14!45;UBERON:0003061!6.35e-14!45;UBERON:0000072!7.46e-14!27;UBERON:0002193!1.39e-13!48;UBERON:0003929!3.59e-12!55;UBERON:0002368!3.18e-11!60;UBERON:0005911!4.47e-11!69;UBERON:0000065!7.59e-11!41;UBERON:0001004!2.03e-10!42;UBERON:0000063!2.39e-10!35;UBERON:0002530!1.14e-09!65;UBERON:0000490!1.30e-09!66;UBERON:0000077!2.75e-08!97;UBERON:0001041!4.92e-08!92;UBERON:0000949!6.80e-08!72;UBERON:0002384!2.87e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.60e-14,46;UBERON:0002370,5.33e-09,23;UBERON:0000974,5.33e-09,23;UBERON:0004807,5.33e-09,23;UBERON:0005058,5.33e-09,23;UBERON:0003351,5.33e-09,23;UBERON:0009113,5.33e-09,23;UBERON:0003295,5.33e-09,23;UBERON:0009722,5.33e-09,23;UBERON:0005562,5.33e-09,23;UBERON:0007690,5.33e-09,23;UBERON:0006562,1.31e-08,24;UBERON:0003408,1.31e-08,24;UBERON:0001557,1.31e-08,24;UBERON:0001042,1.31e-08,24;UBERON:0008814,1.31e-08,24;UBERON:0009145,1.31e-08,24;UBERON:0000077,1.00e-07,35;UBERON:0000072,1.31e-07,27;UBERON:0002394,4.21e-07,1;UBERON:0001281,4.21e-07,1;UBERON:0000353,4.21e-07,1;UBERON:0003497,4.21e-07,1;UBERON:0003909,4.21e-07,1;UBERON:0003928,4.21e-07,1;UBERON:0003835,4.21e-07,1;UBERON:0003513,4.21e-07,1;UBERON:0001280,4.21e-07,1;UBERON:0004647,4.21e-07,1;UBERON:0002294,4.21e-07,1;UBERON:0001173,4.21e-07,1;UBERON:0004912,4.21e-07,1;UBERON:0005171,4.21e-07,1;UBERON:0004177,4.68e-07,29;UBERON:0005057,4.68e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,2.96983643915625,8.869689495555,7.49006484230379,0.856089841127525,0.558405112967355,3.76641605848653,3.4968160967599,0.333109761815663,0.202475267389826,0,0.473193248037357,0.274228867211478,0,0,9.33334941288322,7.31359409589019,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.167782606057736,1.45072428402269,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,1.07833612055328,0.599902730993408,0.635351135365324,0,0,0.125654352112864,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.811440485554012,0.72353147925725,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,0,0.341741761595705,0,0,0.376736914009382,0.683471138605126,0.686334519619568,1.18984900995699,0.559805809294632,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.41907650703115,1.02710957164827,0.909445760844565,0.895133478337407,0.39736270956253,0.480781798079875,0.443068581523732,0.100966449948148,0.228620419965,0.302478555410522,0.292373642219257,0.673482891482306,0.584384510907845,0,0,0,0,0,0,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr16:49856460..49856493,- | |||
}} |
Latest revision as of 22:17, 3 August 2015
Short description: | p@chr16:49856460..49856493, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:49856460..49856493, - |
Coexpression cluster: | MCL_coexpression_mm9:601 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.60e-14 | 46 |
thymus | 5.33e-09 | 23 |
neck | 5.33e-09 | 23 |
respiratory system epithelium | 5.33e-09 | 23 |
hemolymphoid system gland | 5.33e-09 | 23 |
pharyngeal epithelium | 5.33e-09 | 23 |
thymic region | 5.33e-09 | 23 |
pharyngeal gland | 5.33e-09 | 23 |
entire pharyngeal arch endoderm | 5.33e-09 | 23 |
thymus primordium | 5.33e-09 | 23 |
early pharyngeal endoderm | 5.33e-09 | 23 |
pharynx | 1.31e-08 | 24 |
gland of gut | 1.31e-08 | 24 |
upper respiratory tract | 1.31e-08 | 24 |
chordate pharynx | 1.31e-08 | 24 |
pharyngeal arch system | 1.31e-08 | 24 |
pharyngeal region of foregut | 1.31e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 1.00e-07 | 35 |
segment of respiratory tract | 1.31e-07 | 27 |
bile duct | 4.21e-07 | 1 |
hepatic sinusoid | 4.21e-07 | 1 |
parenchyma | 4.21e-07 | 1 |
abdomen blood vessel | 4.21e-07 | 1 |
sinusoid | 4.21e-07 | 1 |
digestive system duct | 4.21e-07 | 1 |
abdominal segment blood vessel | 4.21e-07 | 1 |
trunk blood vessel | 4.21e-07 | 1 |
liver parenchyma | 4.21e-07 | 1 |
liver lobule | 4.21e-07 | 1 |
biliary system | 4.21e-07 | 1 |
biliary tree | 4.21e-07 | 1 |
biliary bud | 4.21e-07 | 1 |
hepatic duct | 4.21e-07 | 1 |
hemopoietic organ | 4.68e-07 | 29 |
immune organ | 4.68e-07 | 29 |