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FFCP PHASE1:Mm9::chr19:58530308..58530362,-: Difference between revisions

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{{FFCP|EntrezGene=14585|HGNC=|MCL_coexpression_id=263|UniProt=D3Z3C9|association_with_transcript=36bp_to_ENSMUST00000131877_5end|description=CAGE_peak_3_at_Gfra1_5end|id=chr19:58530308..58530362,-|ontology_enrichment_celltype=CL:0000540!4.36e-13!33;CL:0000047!4.36e-13!33;CL:0000031!4.36e-13!33;CL:0000404!4.36e-13!33;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!5.09e-11!43;CL:0000393!1.62e-08!39;CL:0000211!1.62e-08!39;CL:0000107!8.53e-08!9;CL:0000117!2.56e-07!23;CL:0000337!2.56e-07!23;CL:0000055!4.80e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.98e-16,33;CL:0000047,2.98e-16,33;CL:0000031,2.98e-16,33;CL:0000404,2.98e-16,33;CL:0000221,1.18e-14,44;CL:0000133,1.18e-14,44;CL:0002319,5.42e-14,43;CL:0000393,3.20e-12,39;CL:0000211,3.20e-12,39;CL:0000107,1.24e-10,9;CL:0000117,7.69e-09,23;CL:0000337,7.69e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.50e-23!75;UBERON:0001016!7.50e-23!75;UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0004121!4.57e-20!102;UBERON:0000924!4.57e-20!102;UBERON:0006601!4.57e-20!102;UBERON:0002346!5.51e-15!71;UBERON:0003075!5.51e-15!71;UBERON:0007284!5.51e-15!71;UBERON:0001049!1.18e-12!52;UBERON:0005068!1.18e-12!52;UBERON:0006241!1.18e-12!52;UBERON:0007135!1.18e-12!52;UBERON:0000955!3.42e-11!50;UBERON:0006238!3.42e-11!50;UBERON:0000033!4.03e-11!63;UBERON:0002616!7.22e-11!49;UBERON:0003056!1.02e-09!49;UBERON:0000010!2.82e-09!11;UBERON:0003080!3.38e-09!40;UBERON:0002020!4.87e-09!34;UBERON:0002780!1.15e-08!39;UBERON:0001890!1.15e-08!39;UBERON:0006240!1.15e-08!39;UBERON:0000153!8.33e-08!94;UBERON:0002410!8.53e-08!9;UBERON:0007811!9.66e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-27,75;UBERON:0001017,1.48e-25,73;UBERON:0004121,5.01e-23,95;UBERON:0000924,5.01e-23,95;UBERON:0006601,5.01e-23,95;UBERON:0002346,1.24e-16,64;UBERON:0003075,1.24e-16,64;UBERON:0007284,1.24e-16,64;UBERON:0000073,1.27e-15,54;UBERON:0001049,3.44e-14,52;UBERON:0005068,3.44e-14,52;UBERON:0006241,3.44e-14,52;UBERON:0007135,3.44e-14,52;UBERON:0010371,9.65e-14,73;UBERON:0000010,8.81e-13,11;UBERON:0002020,1.54e-11,34;UBERON:0002410,1.24e-10,9;UBERON:0000955,2.64e-10,47;UBERON:0006238,2.64e-10,47;UBERON:0002616,6.90e-10,46;UBERON:0003056,1.22e-09,49;UBERON:0003080,1.42e-09,40;UBERON:0010314,1.50e-09,92;UBERON:0002780,6.86e-09,39;UBERON:0001890,6.86e-09,39;UBERON:0006240,6.86e-09,39;UBERON:0003528,8.10e-08,29;UBERON:0002791,8.10e-08,29;UBERON:0001893,8.10e-08,29;UBERON:0011216,3.47e-07,194;UBERON:0002240,7.62e-07,6;UBERON:0005174,7.62e-07,6;UBERON:0001137,7.62e-07,6;UBERON:0002021,9.67e-07,10;UBERON:0000411,9.67e-07,10;UBERON:0001950,9.67e-07,10|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,2.28369187762036,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,1.26766280701236,0,0.889294796111139,0,0,0,2.39680088414724,0.768436610643109,0.311068836925433,0,0.630974884054146,7.14127461009509,7.28866185140325,0.367472397644862,0.479227355091182,0,3.30347642998166,4.21368215681119,3.84016333140609,3.29715719325485,2.92760459527711,3.12548022334056,7.53794097303729,1.12552522006336,2.29197371665215,5.00868595305235,5.55249555116501,8.20157561631323,31.6535488132709,61.8931077274573,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,2.95771181531029,0,0,0,0,0,0,0,0,0.148442139064825,1.21439728736295,1.21786191324856,0.461230994512117,0.904335843315735,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,6.29120685500255,4.11750542536764,2.38743269014442,1.73824320192276,3.3243009452943,7.89594569326328,5.84068547043927,0,0.622034853050465,1.26361379216837,0.631325567659422,1.04096354370163,0,0.180062129805349,0.753524089178575,1.2246569847239,1.2811372028485,1.49922759295566,1.81092359517311,0.215567992932842,1.51284864134255,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,3.15434922846191,1.13195073617213,0,0,4.47905326123991,3.0190767341857,1.15980715189884,0.403367049246685,1.77902435075896,0.760902504450237,0.474529061544512,0.494096864172033,1.50801125280162,0.994782360205754,0.974820435595601,0,0.216138049874694,0.199141273254367,2.0863469104839,4.11294645395024,2.25415471346161,2.8511185898344,1.74557238450863,2.94570443539338,0.126473074248515,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0,0,0,0.184753190166605,1.51593129416388,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.43394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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14585
|HGNC=
|MCL_coexpression_id=263
|TSSclassifier=NA
|UniProt=D3Z3C9
|association_with_transcript=36bp_to_ENSMUST00000131877_5end
|cluster_id=chr19:58530308..58530362,-
|description=CAGE_peak_3_at_Gfra1_5end
|id=chr19:58530308..58530362,-
|ontology_enrichment_celltype=CL:0000540!4.36e-13!33;CL:0000047!4.36e-13!33;CL:0000031!4.36e-13!33;CL:0000404!4.36e-13!33;CL:0000221!1.73e-11!44;CL:0000133!1.73e-11!44;CL:0002319!5.09e-11!43;CL:0000393!1.62e-08!39;CL:0000211!1.62e-08!39;CL:0000107!8.53e-08!9;CL:0000117!2.56e-07!23;CL:0000337!2.56e-07!23;CL:0000055!4.80e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.98e-16,33;CL:0000047,2.98e-16,33;CL:0000031,2.98e-16,33;CL:0000404,2.98e-16,33;CL:0000221,1.18e-14,44;CL:0000133,1.18e-14,44;CL:0002319,5.42e-14,43;CL:0000393,3.20e-12,39;CL:0000211,3.20e-12,39;CL:0000107,1.24e-10,9;CL:0000117,7.69e-09,23;CL:0000337,7.69e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.50e-23!75;UBERON:0001016!7.50e-23!75;UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0004121!4.57e-20!102;UBERON:0000924!4.57e-20!102;UBERON:0006601!4.57e-20!102;UBERON:0002346!5.51e-15!71;UBERON:0003075!5.51e-15!71;UBERON:0007284!5.51e-15!71;UBERON:0001049!1.18e-12!52;UBERON:0005068!1.18e-12!52;UBERON:0006241!1.18e-12!52;UBERON:0007135!1.18e-12!52;UBERON:0000955!3.42e-11!50;UBERON:0006238!3.42e-11!50;UBERON:0000033!4.03e-11!63;UBERON:0002616!7.22e-11!49;UBERON:0003056!1.02e-09!49;UBERON:0000010!2.82e-09!11;UBERON:0003080!3.38e-09!40;UBERON:0002020!4.87e-09!34;UBERON:0002780!1.15e-08!39;UBERON:0001890!1.15e-08!39;UBERON:0006240!1.15e-08!39;UBERON:0000153!8.33e-08!94;UBERON:0002410!8.53e-08!9;UBERON:0007811!9.66e-08!86
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-27,75;UBERON:0001017,1.48e-25,73;UBERON:0004121,5.01e-23,95;UBERON:0000924,5.01e-23,95;UBERON:0006601,5.01e-23,95;UBERON:0002346,1.24e-16,64;UBERON:0003075,1.24e-16,64;UBERON:0007284,1.24e-16,64;UBERON:0000073,1.27e-15,54;UBERON:0001049,3.44e-14,52;UBERON:0005068,3.44e-14,52;UBERON:0006241,3.44e-14,52;UBERON:0007135,3.44e-14,52;UBERON:0010371,9.65e-14,73;UBERON:0000010,8.81e-13,11;UBERON:0002020,1.54e-11,34;UBERON:0002410,1.24e-10,9;UBERON:0000955,2.64e-10,47;UBERON:0006238,2.64e-10,47;UBERON:0002616,6.90e-10,46;UBERON:0003056,1.22e-09,49;UBERON:0003080,1.42e-09,40;UBERON:0010314,1.50e-09,92;UBERON:0002780,6.86e-09,39;UBERON:0001890,6.86e-09,39;UBERON:0006240,6.86e-09,39;UBERON:0003528,8.10e-08,29;UBERON:0002791,8.10e-08,29;UBERON:0001893,8.10e-08,29;UBERON:0011216,3.47e-07,194;UBERON:0002240,7.62e-07,6;UBERON:0005174,7.62e-07,6;UBERON:0001137,7.62e-07,6;UBERON:0002021,9.67e-07,10;UBERON:0000411,9.67e-07,10;UBERON:0001950,9.67e-07,10
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,2.28369187762036,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,4.65327859977075,4.23192783417626,1.26766280701236,0,0.889294796111139,0,0,0,2.39680088414724,0.768436610643109,0.311068836925433,0,0.630974884054146,7.14127461009509,7.28866185140325,0.367472397644862,0.479227355091182,0,3.30347642998166,4.21368215681119,3.84016333140609,3.29715719325485,2.92760459527711,3.12548022334056,7.53794097303729,1.12552522006336,2.29197371665215,5.00868595305235,5.55249555116501,8.20157561631323,31.6535488132709,61.8931077274573,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,2.95771181531029,0,0,0,0,0,0,0,0,0.148442139064825,1.21439728736295,1.21786191324856,0.461230994512117,0.904335843315735,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,6.29120685500255,4.11750542536764,2.38743269014442,1.73824320192276,3.3243009452943,7.89594569326328,5.84068547043927,0,0.622034853050465,1.26361379216837,0.631325567659422,1.04096354370163,0,0.180062129805349,0.753524089178575,1.2246569847239,1.2811372028485,1.49922759295566,1.81092359517311,0.215567992932842,1.51284864134255,0.703804496655795,1.31517439456545,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0.469052119962192,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,3.15434922846191,1.13195073617213,0,0,4.47905326123991,3.0190767341857,1.15980715189884,0.403367049246685,1.77902435075896,0.760902504450237,0.474529061544512,0.494096864172033,1.50801125280162,0.994782360205754,0.974820435595601,0,0.216138049874694,0.199141273254367,2.0863469104839,4.11294645395024,2.25415471346161,2.8511185898344,1.74557238450863,2.94570443539338,0.126473074248515,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0.648540907100142,0,0,0,0.312037673114561,0,0,0,0.184753190166605,1.51593129416388,0.325929952884052,0.339490171550376,0,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,4.17431533968259,8.08760637486202,0,0.252470927204373,11.9893123378178,14.055794794679,16.1567548299599,16.9667846546312,25.3990488453929,20.3815102167959,11.7395103485719,15.4895604692995,14.2303600060748,1.60660658210904,0.283880170416537,0.712262414669021,0.325773918707152,0.164970122972535,0,0.971122544619926,1.51161778482376,2.64047111658257,2.06711325016541,1.22974059177571,0.775284879504663,0.363533729477506,0,0.316036757935816,0,1.03135543248187,1.02131881726136,1.8006109403131,0.905510786479282,0.857348140126369,0.532020700926821,0.535106452806212,1.64549020602121,1.522324745573,0,0,0.220528398054962,0,0.645857706783622,0.361877549568935,0.835606408021955,0.492422699235184,0.291480836629851,3.70850604021019,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0.954670618015114,3.47969592939249,2.23651413839534,1.40406943068342,1.25452977608681,1.31017538247707,1.88810084938749,1.32245529160537,0.26175594198403,0.777689839750757,0,0,0,0,0.388902376688095,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0.405450430580328,3.18403967210964,2.46849563657811,3.22248052201467,1.19208812868759,0.600977247599844,1.32920574457119,0.706765149637033,0.990688486514998,0.604957110821043,0,0.481059208201647,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,2.30162618253588,2.86447756719698,1.89038500578056,2.74033007908257,1.5107877947794,2.70009000092722,1.80128481289688,3.62513927187364,1.03552062350364,0.62272408550506,1.19707462020309,1.70733605754134,0.972426868273176,0.628839487883947,0.367687016900028,0.666740183404846,1.23621034343337,0,1.01078884705519,1.77435509923168,0.377252682772152,0.936415074698824,0.89635213366817,1.14870937911227,1.90517476513229,0.695305955669133,0.38581844092741,1.23625770240992,0.441596760403192,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.282328141245992,0.846146078916765,0.914639864363863,1.31534855718921,0.407412341537585,0.561142271657738,1.18635018124174,0.591026894253381,2.45538625901814,0.619747364743864,0.385813221962283,1.49886346762768,1.16965804222704,0.859484216193193,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p3@Gfra1
}}

Latest revision as of 01:31, 26 September 2015

Short description:p3@Gfra1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gfra1_5end
Coexpression cluster:MCL_coexpression_mm9:263
Association with transcript: 36bp_to_ENSMUST00000131877_5end
EntrezGene:Gfra1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gfra1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D931.65
Mouse Schwann, donor2.CNhs12573.11746-123F961.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.40
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.48
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.27e-2775
central nervous system1.48e-2573
ectoderm-derived structure5.01e-2395
ectoderm5.01e-2395
presumptive ectoderm5.01e-2395
neurectoderm1.24e-1664
neural plate1.24e-1664
presumptive neural plate1.24e-1664
regional part of nervous system1.27e-1554
neural tube3.44e-1452
neural rod3.44e-1452
future spinal cord3.44e-1452
neural keel3.44e-1452
ecto-epithelium9.65e-1473
peripheral nervous system8.81e-1311
gray matter1.54e-1134
autonomic nervous system1.24e-109
brain2.64e-1047
future brain2.64e-1047
regional part of brain6.90e-1046
pre-chordal neural plate1.22e-0949
anterior neural tube1.42e-0940
structure with developmental contribution from neural crest1.50e-0992
regional part of forebrain6.86e-0939
forebrain6.86e-0939
future forebrain6.86e-0939
brain grey matter8.10e-0829
regional part of telencephalon8.10e-0829
telencephalon8.10e-0829
organ system subdivision3.47e-07194
spinal cord7.62e-076
dorsal region element7.62e-076
dorsum7.62e-076
occipital lobe9.67e-0710
visual cortex9.67e-0710
neocortex9.67e-0710
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