Personal tools

FFCP PHASE1:Mm9::chr2:79095374..79095400,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=122|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=-182bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_11_at_Itga4_5end|id=chr2:79095374..79095400,+|ontology_enrichment_celltype=CL:0000988!2.55e-14!32;CL:0002032!2.55e-14!32;CL:0000037!2.55e-14!32;CL:0000566!2.55e-14!32;CL:0000837!2.55e-14!32;CL:0002031!2.08e-12!25;CL:0000838!6.25e-12!12;CL:0000084!6.13e-11!11;CL:0000827!6.13e-11!11;CL:0000542!1.12e-10!13;CL:0000051!1.12e-10!13;CL:0000738!1.30e-10!17;CL:0002087!1.30e-10!17;CL:0000791!2.29e-09!9;CL:0000789!2.29e-09!9;CL:0002420!2.29e-09!9;CL:0002419!2.29e-09!9;CL:0000790!2.29e-09!9;CL:0002320!3.56e-09!46;CL:0000134!3.56e-09!46;CL:0000624!2.36e-08!8|ontology_enrichment_celltype_v019_2=CL:0002031,4.21e-29,25;CL:0000738,3.42e-24,17;CL:0002087,3.42e-24,17;CL:0000988,2.17e-22,32;CL:0002032,2.17e-22,32;CL:0000037,2.17e-22,32;CL:0000837,2.17e-22,32;CL:0000838,5.74e-21,12;CL:0000542,2.61e-19,13;CL:0000051,2.61e-19,13;CL:0000084,4.79e-17,11;CL:0000827,4.79e-17,11;CL:0002320,4.48e-15,46;CL:0000134,4.48e-15,46;CL:0000791,5.87e-15,9;CL:0000789,5.87e-15,9;CL:0002420,5.87e-15,9;CL:0002419,5.87e-15,9;CL:0000790,5.87e-15,9;CL:0000219,1.37e-12,54;CL:0002476,9.10e-12,2;CL:0000624,4.05e-11,8;CL:0000839,2.44e-10,13;CL:0000034,9.69e-09,97;CL:0000553,1.01e-08,6;CL:0000556,1.01e-08,6;CL:0000763,2.27e-08,16;CL:0000049,5.10e-07,19;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000723,9.51e-07,91;CL:0000048,9.51e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.04e-24!48;UBERON:0002390!7.76e-22!45;UBERON:0003061!7.76e-22!45;UBERON:0002405!1.01e-20!70;UBERON:0004177!7.72e-15!29;UBERON:0002370!5.12e-14!23;UBERON:0000974!5.12e-14!23;UBERON:0004807!5.12e-14!23;UBERON:0005058!5.12e-14!23;UBERON:0003351!5.12e-14!23;UBERON:0009113!5.12e-14!23;UBERON:0003295!5.12e-14!23;UBERON:0009722!5.12e-14!23;UBERON:0005562!5.12e-14!23;UBERON:0007690!5.12e-14!23;UBERON:0006562!3.99e-13!24;UBERON:0003408!3.99e-13!24;UBERON:0001557!3.99e-13!24;UBERON:0001042!3.99e-13!24;UBERON:0008814!3.99e-13!24;UBERON:0009145!3.99e-13!24;UBERON:0003081!9.46e-13!88;UBERON:0005057!6.51e-12!51;UBERON:0000072!7.21e-11!27;UBERON:0002384!3.56e-09!46;UBERON:0000063!1.96e-08!35;UBERON:0002371!1.07e-07!16;UBERON:0002368!1.48e-07!60;UBERON:0003929!4.72e-07!55;UBERON:0000065!8.55e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.48e-15,46;UBERON:0002371,2.27e-08,16;UBERON:0002193,6.74e-08,48;UBERON:0002405,6.74e-08,48|phase1_expression=0,0,0,0,0,0,0,5.03580961422147,2.81577444303333,3.7450324211519,0.34243593645101,0.478632953972018,0.513602189793617,0.961624426608971,0.666219523631325,0.607425802169478,0,3.3123527362615,3.70208970735495,2.12194825899015,0,0.496454756004426,1.04479915655574,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.599075622529601,0,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.622034853050465,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0.657587197282725,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,3.01582567878545,2.71952841909355,0,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.683483523191411,0,0,0.188368457004691,0.683471138605126,0.457556346413045,1.01987057996313,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0.810900861160657,0.924398614483445,0.77952493786677,0.895133478337407,0.79472541912506,0.360586348559907,0.443068581523732,0.302899349844443,1.06689529317,0.705783295957884,0.487289403698762,0.865906574762965,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0|short_description=p11@Itga4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16401
|HGNC=
|MCL_coexpression_id=122
|TSSclassifier=NA
|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25
|association_with_transcript=-182bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end
|cluster_id=chr2:79095374..79095400,+
|description=CAGE_peak_11_at_Itga4_5end
|id=chr2:79095374..79095400,+
|ontology_enrichment_celltype=CL:0000988!2.55e-14!32;CL:0002032!2.55e-14!32;CL:0000037!2.55e-14!32;CL:0000566!2.55e-14!32;CL:0000837!2.55e-14!32;CL:0002031!2.08e-12!25;CL:0000838!6.25e-12!12;CL:0000084!6.13e-11!11;CL:0000827!6.13e-11!11;CL:0000542!1.12e-10!13;CL:0000051!1.12e-10!13;CL:0000738!1.30e-10!17;CL:0002087!1.30e-10!17;CL:0000791!2.29e-09!9;CL:0000789!2.29e-09!9;CL:0002420!2.29e-09!9;CL:0002419!2.29e-09!9;CL:0000790!2.29e-09!9;CL:0002320!3.56e-09!46;CL:0000134!3.56e-09!46;CL:0000624!2.36e-08!8
|ontology_enrichment_celltype_v019_2=CL:0002031,4.21e-29,25;CL:0000738,3.42e-24,17;CL:0002087,3.42e-24,17;CL:0000988,2.17e-22,32;CL:0002032,2.17e-22,32;CL:0000037,2.17e-22,32;CL:0000837,2.17e-22,32;CL:0000838,5.74e-21,12;CL:0000542,2.61e-19,13;CL:0000051,2.61e-19,13;CL:0000084,4.79e-17,11;CL:0000827,4.79e-17,11;CL:0002320,4.48e-15,46;CL:0000134,4.48e-15,46;CL:0000791,5.87e-15,9;CL:0000789,5.87e-15,9;CL:0002420,5.87e-15,9;CL:0002419,5.87e-15,9;CL:0000790,5.87e-15,9;CL:0000219,1.37e-12,54;CL:0002476,9.10e-12,2;CL:0000624,4.05e-11,8;CL:0000839,2.44e-10,13;CL:0000034,9.69e-09,97;CL:0000553,1.01e-08,6;CL:0000556,1.01e-08,6;CL:0000763,2.27e-08,16;CL:0000049,5.10e-07,19;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000723,9.51e-07,91;CL:0000048,9.51e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!7.04e-24!48;UBERON:0002390!7.76e-22!45;UBERON:0003061!7.76e-22!45;UBERON:0002405!1.01e-20!70;UBERON:0004177!7.72e-15!29;UBERON:0002370!5.12e-14!23;UBERON:0000974!5.12e-14!23;UBERON:0004807!5.12e-14!23;UBERON:0005058!5.12e-14!23;UBERON:0003351!5.12e-14!23;UBERON:0009113!5.12e-14!23;UBERON:0003295!5.12e-14!23;UBERON:0009722!5.12e-14!23;UBERON:0005562!5.12e-14!23;UBERON:0007690!5.12e-14!23;UBERON:0006562!3.99e-13!24;UBERON:0003408!3.99e-13!24;UBERON:0001557!3.99e-13!24;UBERON:0001042!3.99e-13!24;UBERON:0008814!3.99e-13!24;UBERON:0009145!3.99e-13!24;UBERON:0003081!9.46e-13!88;UBERON:0005057!6.51e-12!51;UBERON:0000072!7.21e-11!27;UBERON:0002384!3.56e-09!46;UBERON:0000063!1.96e-08!35;UBERON:0002371!1.07e-07!16;UBERON:0002368!1.48e-07!60;UBERON:0003929!4.72e-07!55;UBERON:0000065!8.55e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.48e-15,46;UBERON:0002371,2.27e-08,16;UBERON:0002193,6.74e-08,48;UBERON:0002405,6.74e-08,48
|phase1_expression=0,0,0,0,0,0,0,5.03580961422147,2.81577444303333,3.7450324211519,0.34243593645101,0.478632953972018,0.513602189793617,0.961624426608971,0.666219523631325,0.607425802169478,0,3.3123527362615,3.70208970735495,2.12194825899015,0,0.496454756004426,1.04479915655574,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,1.45072428402269,2.35265659399725,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.599075622529601,0,0.381210681219194,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.622034853050465,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0.657587197282725,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0,3.01582567878545,2.71952841909355,0,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0.683483523191411,0,0,0.188368457004691,0.683471138605126,0.457556346413045,1.01987057996313,1.25956307091292,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0.810900861160657,0.924398614483445,0.77952493786677,0.895133478337407,0.79472541912506,0.360586348559907,0.443068581523732,0.302899349844443,1.06689529317,0.705783295957884,0.487289403698762,0.865906574762965,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644613162144895,0,0,0
|short_description=p11@Itga4
}}

Latest revision as of 00:45, 27 September 2015

Short description:p11@Itga4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Itga4_5end
Coexpression cluster:MCL_coexpression_mm9:122
Association with transcript: -182bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end
EntrezGene:Itga4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Itga4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell4.21e-2925
leukocyte3.42e-2417
nongranular leukocyte3.42e-2417
hematopoietic cell2.17e-2232
hematopoietic oligopotent progenitor cell2.17e-2232
hematopoietic stem cell2.17e-2232
hematopoietic multipotent progenitor cell2.17e-2232
lymphoid lineage restricted progenitor cell5.74e-2112
lymphocyte2.61e-1913
common lymphoid progenitor2.61e-1913
T cell4.79e-1711
pro-T cell4.79e-1711
connective tissue cell4.48e-1546
mesenchymal cell4.48e-1546
mature alpha-beta T cell5.87e-159
alpha-beta T cell5.87e-159
immature T cell5.87e-159
mature T cell5.87e-159
immature alpha-beta T cell5.87e-159
motile cell1.37e-1254
bone marrow macrophage9.10e-122
CD4-positive, alpha-beta T cell4.05e-118
myeloid lineage restricted progenitor cell2.44e-1013
stem cell9.69e-0997
megakaryocyte progenitor cell1.01e-086
megakaryocyte1.01e-086
myeloid cell2.27e-0816
common myeloid progenitor5.10e-0719
regulatory T cell5.73e-071
CD4-positive, CD25-positive, alpha-beta regulatory T cell5.73e-071
somatic stem cell9.51e-0791
multi fate stem cell9.51e-0791

Uber anatomy
Ontology termp-valuen
connective tissue4.48e-1546
bone marrow2.27e-0816
hemolymphoid system6.74e-0848
immune system6.74e-0848
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:79095374..79095400,%2B&oldid=4283430"