FFCP PHASE1:Mm9::chr8:87296432..87296489,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3161|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:87296432..87296489,-|id=chr8:87296432..87296489,-|ontology_enrichment_celltype=CL:0000117!7.56e-13!23;CL:0000337!7.56e-13!23;CL:0000221!8.03e-09!44;CL:0000133!8.03e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.71e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-18,23;CL:0000337,2.66e-18,23;CL:0002319,1.55e-13,43;CL:0000221,5.26e-13,44;CL:0000133,5.26e-13,44;CL:0000540,2.02e-10,33;CL:0000047,2.02e-10,33;CL:0000031,2.02e-10,33;CL:0000404,2.02e-10,33;CL:0000393,9.63e-08,39;CL:0000211,9.63e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.25e-23!52;UBERON:0005068!1.25e-23!52;UBERON:0006241!1.25e-23!52;UBERON:0007135!1.25e-23!52;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0002020!2.93e-22!34;UBERON:0000955!3.98e-22!50;UBERON:0006238!3.98e-22!50;UBERON:0002616!1.59e-21!49;UBERON:0000073!4.00e-21!75;UBERON:0001016!4.00e-21!75;UBERON:0000033!6.16e-21!63;UBERON:0002791!1.91e-19!29;UBERON:0003528!1.91e-19!29;UBERON:0001893!1.91e-19!29;UBERON:0004121!1.02e-18!102;UBERON:0000924!1.02e-18!102;UBERON:0006601!1.02e-18!102;UBERON:0003080!1.77e-16!40;UBERON:0002780!5.80e-16!39;UBERON:0001890!5.80e-16!39;UBERON:0006240!5.80e-16!39;UBERON:0002346!6.62e-16!71;UBERON:0003075!6.62e-16!71;UBERON:0007284!6.62e-16!71;UBERON:0000956!2.03e-15!21;UBERON:0001869!2.03e-15!21;UBERON:0000203!2.03e-15!21;UBERON:0003056!2.32e-14!49;UBERON:0002619!1.27e-12!17;UBERON:0007811!6.14e-09!86;UBERON:0002021!1.02e-08!10;UBERON:0000411!1.02e-08!10;UBERON:0001950!1.02e-08!10;UBERON:0000153!1.93e-08!94;UBERON:0003076!7.17e-08!12;UBERON:0003057!7.17e-08!12;UBERON:0004111!1.36e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.49e-34,54;UBERON:0001017,1.75e-33,73;UBERON:0001049,4.98e-33,52;UBERON:0005068,4.98e-33,52;UBERON:0006241,4.98e-33,52;UBERON:0007135,4.98e-33,52;UBERON:0002020,2.65e-32,34;UBERON:0001016,4.62e-32,75;UBERON:0000955,1.53e-28,47;UBERON:0006238,1.53e-28,47;UBERON:0003528,4.09e-28,29;UBERON:0002791,4.09e-28,29;UBERON:0001893,4.09e-28,29;UBERON:0004121,8.99e-28,95;UBERON:0000924,8.99e-28,95;UBERON:0006601,8.99e-28,95;UBERON:0002616,1.14e-27,46;UBERON:0002346,3.76e-26,64;UBERON:0003075,3.76e-26,64;UBERON:0007284,3.76e-26,64;UBERON:0003080,1.44e-23,40;UBERON:0010371,6.77e-23,73;UBERON:0002780,8.39e-23,39;UBERON:0001890,8.39e-23,39;UBERON:0006240,8.39e-23,39;UBERON:0000956,4.02e-22,21;UBERON:0001869,4.02e-22,21;UBERON:0000203,4.02e-22,21;UBERON:0003056,3.00e-19,49;UBERON:0002619,5.71e-18,17;UBERON:0010314,3.32e-14,92;UBERON:0002021,3.53e-12,10;UBERON:0000411,3.53e-12,10;UBERON:0001950,3.53e-12,10;UBERON:0003076,1.03e-09,12;UBERON:0003057,1.03e-09,12;UBERON:0004111,8.98e-09,122;UBERON:0000025,1.63e-07,114;UBERON:0001954,2.91e-07,7;UBERON:0003022,2.91e-07,7;UBERON:0002421,2.91e-07,7;UBERON:0000349,2.91e-07,7;UBERON:0002600,2.91e-07,7;UBERON:0002420,3.84e-07,8;UBERON:0007245,3.84e-07,8;UBERON:0010009,3.84e-07,8;UBERON:0010011,3.84e-07,8;UBERON:0000454,3.84e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0,0.782391344348039,5.66865406589161,14.4992880604751,10.304784650937,2.79972843250725,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.42779753031517,3.70293685490423,3.1691570175309,0,0,0,0,0,1.19840044207362,6.14749288514487,17.5235444801327,15.7956947848078,19.3498964443271,2.85650984403804,4.19650227808066,3.06226998037385,2.68367318851062,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,1.97829431595291,2.28719109006024,4.68822033501084,6.70039197603314,2.8138130501584,5.04234217663473,3.53554302568401,4.9830088279686,4.47358669980721,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.808834249737046,0.220841518460394,0,1.86391761218122,48.0160507098937,31.8358994356452,0,0,0,0,3.2953940669061,3.66000482254901,3.64397621127307,17.2086076990354,14.3200656104985,4.98691306942944,4.54275536589721,0.203678727700633,0,0,2.10441855886474,0,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0.696504333044333,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,16.1923260394378,38.2805158050938,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0.491764273019036,1.93155722413313,8.0275294993896,3.39913891117389,2.45902418065013,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,3.85585579706168,0.709700426041343,0.712262414669021,0.651547837414304,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,2.38307724027652,0,0,0,0,0,0.822745103010605,0.913394847343798,0,0,1.10264199027481,1.31909002353184,0,0.542816324353403,0.596861720015682,0.984845398470368,0,9.27126510052548,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0.216010681643603,1.04544148007234,0.218362563746178,0.539457385539283,0.41326727862668,1.30877970992015,0.90730481304255,4.97071450469541,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,3.62768613784338,0,0,0,0.386379188064381,0.563047426353546,2.01466786693992,2.78678892802786,1.00314420807073,27.1080884456192,21.6352861158373,22.9158205375759,20.2786755165551,21.2375581128899,17.3740596399631,21.6007200074178,23.4167025676595,19.0319811773366,25.3702552758392,0,0,0.341467211508268,0.729320151204882,0.628839487883947,1.47074806760011,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,1.52087579934144,1.50901073108861,1.77918864192777,2.11283002936069,2.01024141344646,0.476293691283074,1.97003354106254,1.92909220463705,2.88460130562315,1.76638704161277,2.74295401908332,1.59728225543404,0.953744759789284,1.45346416632329,1.50575008664529,1.26921911837515,1.64635175585495,1.31534855718921,2.30866993537965,1.68342681497322,1.06771516311757,0.985044823755635,0.818462086339379,2.32405261778949,0.771626443924566,5.74564329257276,1.87145286756327,3.22306581072447,0.382576664137687,0.882365676478062,1.15933917810211|short_description=p@chr8:87296432..87296489,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3161 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:87296432..87296489,- | |||
|description=CAGE_peak_at_chr8:87296432..87296489,- | |||
|id=chr8:87296432..87296489,- | |||
|ontology_enrichment_celltype=CL:0000117!7.56e-13!23;CL:0000337!7.56e-13!23;CL:0000221!8.03e-09!44;CL:0000133!8.03e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.71e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-18,23;CL:0000337,2.66e-18,23;CL:0002319,1.55e-13,43;CL:0000221,5.26e-13,44;CL:0000133,5.26e-13,44;CL:0000540,2.02e-10,33;CL:0000047,2.02e-10,33;CL:0000031,2.02e-10,33;CL:0000404,2.02e-10,33;CL:0000393,9.63e-08,39;CL:0000211,9.63e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-23!52;UBERON:0005068!1.25e-23!52;UBERON:0006241!1.25e-23!52;UBERON:0007135!1.25e-23!52;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0002020!2.93e-22!34;UBERON:0000955!3.98e-22!50;UBERON:0006238!3.98e-22!50;UBERON:0002616!1.59e-21!49;UBERON:0000073!4.00e-21!75;UBERON:0001016!4.00e-21!75;UBERON:0000033!6.16e-21!63;UBERON:0002791!1.91e-19!29;UBERON:0003528!1.91e-19!29;UBERON:0001893!1.91e-19!29;UBERON:0004121!1.02e-18!102;UBERON:0000924!1.02e-18!102;UBERON:0006601!1.02e-18!102;UBERON:0003080!1.77e-16!40;UBERON:0002780!5.80e-16!39;UBERON:0001890!5.80e-16!39;UBERON:0006240!5.80e-16!39;UBERON:0002346!6.62e-16!71;UBERON:0003075!6.62e-16!71;UBERON:0007284!6.62e-16!71;UBERON:0000956!2.03e-15!21;UBERON:0001869!2.03e-15!21;UBERON:0000203!2.03e-15!21;UBERON:0003056!2.32e-14!49;UBERON:0002619!1.27e-12!17;UBERON:0007811!6.14e-09!86;UBERON:0002021!1.02e-08!10;UBERON:0000411!1.02e-08!10;UBERON:0001950!1.02e-08!10;UBERON:0000153!1.93e-08!94;UBERON:0003076!7.17e-08!12;UBERON:0003057!7.17e-08!12;UBERON:0004111!1.36e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.49e-34,54;UBERON:0001017,1.75e-33,73;UBERON:0001049,4.98e-33,52;UBERON:0005068,4.98e-33,52;UBERON:0006241,4.98e-33,52;UBERON:0007135,4.98e-33,52;UBERON:0002020,2.65e-32,34;UBERON:0001016,4.62e-32,75;UBERON:0000955,1.53e-28,47;UBERON:0006238,1.53e-28,47;UBERON:0003528,4.09e-28,29;UBERON:0002791,4.09e-28,29;UBERON:0001893,4.09e-28,29;UBERON:0004121,8.99e-28,95;UBERON:0000924,8.99e-28,95;UBERON:0006601,8.99e-28,95;UBERON:0002616,1.14e-27,46;UBERON:0002346,3.76e-26,64;UBERON:0003075,3.76e-26,64;UBERON:0007284,3.76e-26,64;UBERON:0003080,1.44e-23,40;UBERON:0010371,6.77e-23,73;UBERON:0002780,8.39e-23,39;UBERON:0001890,8.39e-23,39;UBERON:0006240,8.39e-23,39;UBERON:0000956,4.02e-22,21;UBERON:0001869,4.02e-22,21;UBERON:0000203,4.02e-22,21;UBERON:0003056,3.00e-19,49;UBERON:0002619,5.71e-18,17;UBERON:0010314,3.32e-14,92;UBERON:0002021,3.53e-12,10;UBERON:0000411,3.53e-12,10;UBERON:0001950,3.53e-12,10;UBERON:0003076,1.03e-09,12;UBERON:0003057,1.03e-09,12;UBERON:0004111,8.98e-09,122;UBERON:0000025,1.63e-07,114;UBERON:0001954,2.91e-07,7;UBERON:0003022,2.91e-07,7;UBERON:0002421,2.91e-07,7;UBERON:0000349,2.91e-07,7;UBERON:0002600,2.91e-07,7;UBERON:0002420,3.84e-07,8;UBERON:0007245,3.84e-07,8;UBERON:0010009,3.84e-07,8;UBERON:0010011,3.84e-07,8;UBERON:0000454,3.84e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0,0.782391344348039,5.66865406589161,14.4992880604751,10.304784650937,2.79972843250725,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.42779753031517,3.70293685490423,3.1691570175309,0,0,0,0,0,1.19840044207362,6.14749288514487,17.5235444801327,15.7956947848078,19.3498964443271,2.85650984403804,4.19650227808066,3.06226998037385,2.68367318851062,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,1.97829431595291,2.28719109006024,4.68822033501084,6.70039197603314,2.8138130501584,5.04234217663473,3.53554302568401,4.9830088279686,4.47358669980721,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.808834249737046,0.220841518460394,0,1.86391761218122,48.0160507098937,31.8358994356452,0,0,0,0,3.2953940669061,3.66000482254901,3.64397621127307,17.2086076990354,14.3200656104985,4.98691306942944,4.54275536589721,0.203678727700633,0,0,2.10441855886474,0,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0.696504333044333,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,16.1923260394378,38.2805158050938,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0.491764273019036,1.93155722413313,8.0275294993896,3.39913891117389,2.45902418065013,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,3.85585579706168,0.709700426041343,0.712262414669021,0.651547837414304,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,2.38307724027652,0,0,0,0,0,0.822745103010605,0.913394847343798,0,0,1.10264199027481,1.31909002353184,0,0.542816324353403,0.596861720015682,0.984845398470368,0,9.27126510052548,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0.216010681643603,1.04544148007234,0.218362563746178,0.539457385539283,0.41326727862668,1.30877970992015,0.90730481304255,4.97071450469541,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,3.62768613784338,0,0,0,0.386379188064381,0.563047426353546,2.01466786693992,2.78678892802786,1.00314420807073,27.1080884456192,21.6352861158373,22.9158205375759,20.2786755165551,21.2375581128899,17.3740596399631,21.6007200074178,23.4167025676595,19.0319811773366,25.3702552758392,0,0,0.341467211508268,0.729320151204882,0.628839487883947,1.47074806760011,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,1.52087579934144,1.50901073108861,1.77918864192777,2.11283002936069,2.01024141344646,0.476293691283074,1.97003354106254,1.92909220463705,2.88460130562315,1.76638704161277,2.74295401908332,1.59728225543404,0.953744759789284,1.45346416632329,1.50575008664529,1.26921911837515,1.64635175585495,1.31534855718921,2.30866993537965,1.68342681497322,1.06771516311757,0.985044823755635,0.818462086339379,2.32405261778949,0.771626443924566,5.74564329257276,1.87145286756327,3.22306581072447,0.382576664137687,0.882365676478062,1.15933917810211 | |||
|short_description=p@chr8:87296432..87296489,- | |||
}} |
Latest revision as of 06:07, 4 August 2015
Short description: | p@chr8:87296432..87296489, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:87296432..87296489, - |
Coexpression cluster: | MCL_coexpression_mm9:3161 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-18 | 23 |
neural cell | 1.55e-13 | 43 |
ectodermal cell | 5.26e-13 | 44 |
neurectodermal cell | 5.26e-13 | 44 |
neuron | 2.02e-10 | 33 |
neuronal stem cell | 2.02e-10 | 33 |
neuroblast | 2.02e-10 | 33 |
electrically signaling cell | 2.02e-10 | 33 |
electrically responsive cell | 9.63e-08 | 39 |
electrically active cell | 9.63e-08 | 39 |