FFCP PHASE1:Mm9::chr9:103014402..103014423,+: Difference between revisions
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{{FFCP|EntrezGene=270192|HGNC=|MCL_coexpression_id=1|UniProt=P61294,Q0PD53,Q0PD54|association_with_transcript=0bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end|description=CAGE_peak_5_at_Rab6b_5end|id=chr9:103014402..103014423,+|ontology_enrichment_celltype=CL:0000540!1.89e-13!33;CL:0000047!1.89e-13!33;CL:0000031!1.89e-13!33;CL:0000404!1.89e-13!33;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000393!5.64e-10!39;CL:0000211!5.64e-10!39;CL:0000221!1.97e-08!44;CL:0000133!1.97e-08!44;CL:0002319!2.04e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-15,23;CL:0000337,1.43e-15,23;CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000393,1.56e-10,39;CL:0000211,1.56e-10,39;CL:0002319,2.55e-09,43;CL:0000221,6.85e-09,44;CL:0000133,6.85e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.62e-25!71;UBERON:0003075!7.62e-25!71;UBERON:0007284!7.62e-25!71;UBERON:0004121!6.41e-24!102;UBERON:0000924!6.41e-24!102;UBERON:0006601!6.41e-24!102;UBERON:0001017!2.17e-23!73;UBERON:0005743!2.17e-23!73;UBERON:0000073!3.16e-23!75;UBERON:0001016!3.16e-23!75;UBERON:0000033!5.56e-21!63;UBERON:0001049!3.28e-20!52;UBERON:0005068!3.28e-20!52;UBERON:0006241!3.28e-20!52;UBERON:0007135!3.28e-20!52;UBERON:0000955!1.61e-18!50;UBERON:0006238!1.61e-18!50;UBERON:0002616!6.85e-18!49;UBERON:0003056!3.78e-17!49;UBERON:0002020!3.22e-15!34;UBERON:0003080!2.34e-14!40;UBERON:0007811!3.17e-14!86;UBERON:0002780!9.82e-14!39;UBERON:0001890!9.82e-14!39;UBERON:0006240!9.82e-14!39;UBERON:0000153!1.01e-12!94;UBERON:0002791!7.66e-12!29;UBERON:0003528!7.66e-12!29;UBERON:0001893!7.66e-12!29;UBERON:0000956!1.51e-07!21;UBERON:0001869!1.51e-07!21;UBERON:0000203!1.51e-07!21;UBERON:0002021!6.48e-07!10;UBERON:0000411!6.48e-07!10;UBERON:0001950!6.48e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.15e-30,64;UBERON:0003075,5.15e-30,64;UBERON:0007284,5.15e-30,64;UBERON:0001017,1.28e-27,73;UBERON:0001016,3.16e-27,75;UBERON:0000073,1.46e-26,54;UBERON:0001049,6.62e-25,52;UBERON:0005068,6.62e-25,52;UBERON:0006241,6.62e-25,52;UBERON:0007135,6.62e-25,52;UBERON:0004121,1.49e-24,95;UBERON:0000924,1.49e-24,95;UBERON:0006601,1.49e-24,95;UBERON:0010371,1.16e-23,73;UBERON:0003056,1.67e-20,49;UBERON:0002020,2.37e-20,34;UBERON:0000955,3.86e-20,47;UBERON:0006238,3.86e-20,47;UBERON:0002616,2.54e-19,46;UBERON:0010314,7.29e-18,92;UBERON:0003080,2.29e-17,40;UBERON:0002780,1.55e-16,39;UBERON:0001890,1.55e-16,39;UBERON:0006240,1.55e-16,39;UBERON:0003528,1.05e-15,29;UBERON:0002791,1.05e-15,29;UBERON:0001893,1.05e-15,29;UBERON:0000956,8.24e-10,21;UBERON:0001869,8.24e-10,21;UBERON:0000203,8.24e-10,21;UBERON:0002021,6.31e-09,10;UBERON:0000411,6.31e-09,10;UBERON:0001950,6.31e-09,10;UBERON:0003076,3.33e-08,12;UBERON:0003057,3.33e-08,12;UBERON:0002619,5.99e-08,17;UBERON:0002420,1.85e-07,8;UBERON:0007245,1.85e-07,8;UBERON:0010009,1.85e-07,8;UBERON:0010011,1.85e-07,8;UBERON:0000454,1.85e-07,8;UBERON:0002240,4.23e-07,6;UBERON:0005174,4.23e-07,6;UBERON:0001137,4.23e-07,6|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0,0,10.7227724255587,8.99284664762456,11.4089652631112,0,0,0,0,0,0,0.384218305321555,2.28117147078651,2.56511282830212,1.89292465216244,21.7094748146891,19.436431603742,1.5923803897944,2.20444583341944,0.919218786610021,7.70811166995721,15.4501679083077,18.1255709242367,10.2871304429551,15.0954611943976,10.4182674111352,15.0758819460746,7.87867654044352,10.5430790965999,23.2756582524197,17.6540884190888,16.9623495701024,0.227178579999552,1.43585964202892,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.519572009205738,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.593768556259299,0.693941307064543,1.52232739156071,2.99800146432876,1.95939432718409,2.70454026412121,0,0.988779870937496,1.15679485535929,0,0,0.220841518460394,0,0,7.61230072230023,26.5997317653088,0,0,0,0,15.4284358586967,13.2675174817402,6.28271760564322,14.6012428961512,16.3657892691412,20.3632283668369,20.766881672673,0.203678727700633,0.124406970610093,0.252722758433675,1.26265113531884,1.04096354370163,0.689706313300419,2.52086981727489,2.41127708537144,3.81004395247436,3.58718416797579,3.84177070694888,4.65666067330228,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.540186184383045,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0,0,0.402619256281115,14.0894265537965,5.76265829323993,0,0,0.213288250535234,1.16118335930219,1.15980715189884,1.00841762311671,0.444756087689741,0.760902504450237,0.949058123089023,0.494096864172033,1.00534083520108,0.596869416123452,0.779856348476481,0,0.648414149624083,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=270192 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P61294,Q0PD53,Q0PD54 | |||
|association_with_transcript=0bp_to_ENSMUST00000035155,NM_173781,uc009rgf.1_5end | |||
|cluster_id=chr9:103014402..103014423,+ | |||
|description=CAGE_peak_5_at_Rab6b_5end | |||
|id=chr9:103014402..103014423,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.89e-13!33;CL:0000047!1.89e-13!33;CL:0000031!1.89e-13!33;CL:0000404!1.89e-13!33;CL:0000117!1.67e-12!23;CL:0000337!1.67e-12!23;CL:0000393!5.64e-10!39;CL:0000211!5.64e-10!39;CL:0000221!1.97e-08!44;CL:0000133!1.97e-08!44;CL:0002319!2.04e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-15,23;CL:0000337,1.43e-15,23;CL:0000540,2.67e-14,33;CL:0000047,2.67e-14,33;CL:0000031,2.67e-14,33;CL:0000404,2.67e-14,33;CL:0000393,1.56e-10,39;CL:0000211,1.56e-10,39;CL:0002319,2.55e-09,43;CL:0000221,6.85e-09,44;CL:0000133,6.85e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.62e-25!71;UBERON:0003075!7.62e-25!71;UBERON:0007284!7.62e-25!71;UBERON:0004121!6.41e-24!102;UBERON:0000924!6.41e-24!102;UBERON:0006601!6.41e-24!102;UBERON:0001017!2.17e-23!73;UBERON:0005743!2.17e-23!73;UBERON:0000073!3.16e-23!75;UBERON:0001016!3.16e-23!75;UBERON:0000033!5.56e-21!63;UBERON:0001049!3.28e-20!52;UBERON:0005068!3.28e-20!52;UBERON:0006241!3.28e-20!52;UBERON:0007135!3.28e-20!52;UBERON:0000955!1.61e-18!50;UBERON:0006238!1.61e-18!50;UBERON:0002616!6.85e-18!49;UBERON:0003056!3.78e-17!49;UBERON:0002020!3.22e-15!34;UBERON:0003080!2.34e-14!40;UBERON:0007811!3.17e-14!86;UBERON:0002780!9.82e-14!39;UBERON:0001890!9.82e-14!39;UBERON:0006240!9.82e-14!39;UBERON:0000153!1.01e-12!94;UBERON:0002791!7.66e-12!29;UBERON:0003528!7.66e-12!29;UBERON:0001893!7.66e-12!29;UBERON:0000956!1.51e-07!21;UBERON:0001869!1.51e-07!21;UBERON:0000203!1.51e-07!21;UBERON:0002021!6.48e-07!10;UBERON:0000411!6.48e-07!10;UBERON:0001950!6.48e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.15e-30,64;UBERON:0003075,5.15e-30,64;UBERON:0007284,5.15e-30,64;UBERON:0001017,1.28e-27,73;UBERON:0001016,3.16e-27,75;UBERON:0000073,1.46e-26,54;UBERON:0001049,6.62e-25,52;UBERON:0005068,6.62e-25,52;UBERON:0006241,6.62e-25,52;UBERON:0007135,6.62e-25,52;UBERON:0004121,1.49e-24,95;UBERON:0000924,1.49e-24,95;UBERON:0006601,1.49e-24,95;UBERON:0010371,1.16e-23,73;UBERON:0003056,1.67e-20,49;UBERON:0002020,2.37e-20,34;UBERON:0000955,3.86e-20,47;UBERON:0006238,3.86e-20,47;UBERON:0002616,2.54e-19,46;UBERON:0010314,7.29e-18,92;UBERON:0003080,2.29e-17,40;UBERON:0002780,1.55e-16,39;UBERON:0001890,1.55e-16,39;UBERON:0006240,1.55e-16,39;UBERON:0003528,1.05e-15,29;UBERON:0002791,1.05e-15,29;UBERON:0001893,1.05e-15,29;UBERON:0000956,8.24e-10,21;UBERON:0001869,8.24e-10,21;UBERON:0000203,8.24e-10,21;UBERON:0002021,6.31e-09,10;UBERON:0000411,6.31e-09,10;UBERON:0001950,6.31e-09,10;UBERON:0003076,3.33e-08,12;UBERON:0003057,3.33e-08,12;UBERON:0002619,5.99e-08,17;UBERON:0002420,1.85e-07,8;UBERON:0007245,1.85e-07,8;UBERON:0010009,1.85e-07,8;UBERON:0010011,1.85e-07,8;UBERON:0000454,1.85e-07,8;UBERON:0002240,4.23e-07,6;UBERON:0005174,4.23e-07,6;UBERON:0001137,4.23e-07,6 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0.34243593645101,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0,0,0,0,0,0,0,0.336093799142464,0,0,0,10.7227724255587,8.99284664762456,11.4089652631112,0,0,0,0,0,0,0.384218305321555,2.28117147078651,2.56511282830212,1.89292465216244,21.7094748146891,19.436431603742,1.5923803897944,2.20444583341944,0.919218786610021,7.70811166995721,15.4501679083077,18.1255709242367,10.2871304429551,15.0954611943976,10.4182674111352,15.0758819460746,7.87867654044352,10.5430790965999,23.2756582524197,17.6540884190888,16.9623495701024,0.227178579999552,1.43585964202892,0.289864488701678,0,0,0,0,0,0.561777680527007,0.340860645156116,0.519572009205738,0,0.704217098883403,0,0,0,0,0,0,0.79928715803342,0.517875767294343,0.593768556259299,0.693941307064543,1.52232739156071,2.99800146432876,1.95939432718409,2.70454026412121,0,0.988779870937496,1.15679485535929,0,0,0.220841518460394,0,0,7.61230072230023,26.5997317653088,0,0,0,0,15.4284358586967,13.2675174817402,6.28271760564322,14.6012428961512,16.3657892691412,20.3632283668369,20.766881672673,0.203678727700633,0.124406970610093,0.252722758433675,1.26265113531884,1.04096354370163,0.689706313300419,2.52086981727489,2.41127708537144,3.81004395247436,3.58718416797579,3.84177070694888,4.65666067330228,0.215567992932842,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.540186184383045,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.243206428637567,0,0,0.402619256281115,14.0894265537965,5.76265829323993,0,0,0.213288250535234,1.16118335930219,1.15980715189884,1.00841762311671,0.444756087689741,0.760902504450237,0.949058123089023,0.494096864172033,1.00534083520108,0.596869416123452,0.779856348476481,0,0.648414149624083,0.199141273254367,0.379335801906163,0.571242563048644,0,0,0.387904974335251,0.701358198903186,0.442655759869801,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0,0.81931657357869,0.345369963731791,0.289298117163023,0,0,0,0.551873492609465,27.6147014779002,19.6915633474901,0,0.252470927204373,1.89304931649754,3.12350995437311,3.23135096599198,0.477937595905104,0.445597348164788,0.849229592366497,1.21443210502468,2.33804686329049,1.97643888973262,14.1381379225595,0.283880170416537,0.534196811001766,0.651547837414304,0.164970122972535,0,0.485561272309963,0.906970670894253,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,1.36175842301515,1.62054984628179,1.03486947026204,0.428674070063185,0.709360934569094,0.535106452806212,2.13913726782757,3.04464949114599,4.22409074514679,1.90648863777438,0.441056796109924,0,0.161464426695906,0.301564624640779,0,0.328281799490123,0.291480836629851,20.025932617135,0.512612642393558,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.276399947608848,0.954670618015114,0.474503990371703,0.813277868507395,0.648032044930808,0.209088296014469,0.87345025498471,0.269728692769641,0.826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.747582730219894,1.15820943319968,0.388902376688095,0.774958940866387,0.675824501963113,0.58678619322877,0.39061315453185,1.67774951081137,0,0.288030006257865,1.89606672376907,0,0.205421914329655,0.129920822977795,0.179026695667481,0.198681354781265,0.721172697119813,0.147689527174577,0.706765149637033,0.685861259894999,0.806609481094724,1.75424185331554,1.25075394132428,1.28564592399726,0.226730383615211,1.77588762699252,1.25599399253266,0.167884616364078,0.772758376128762,0.187682475451182,0.73260649706906,0.214368379079066,1.00314420807073,18.0720589637461,13.3494318587081,9.73922372846974,15.1230800462445,8.22099023724771,9.82012066606611,6.07520250208625,6.75481804836331,10.4222754066367,11.9084871702919,2.49089634202024,1.59609949360412,2.39027048055788,1.70174701947806,2.30574478890781,2.20612210140017,2.22246727801615,3.29656091582231,4.1719497246936,1.51618327058278,1.52087579934144,3.2066478035633,2.06011316433741,2.68905640100451,2.64203157195821,0.476293691283074,2.31768651889711,2.50781986602817,1.64834360321323,2.50238164228475,2.40008476669791,1.24233064311536,3.09967046931517,2.61623549938191,2.63506265162926,1.94613598150856,2.0122077016005,2.10455769150274,2.17286582153379,2.24456908663095,2.84724043498018,2.26560309463796,1.63692417267876,2.63392630016142,2.50778594275484,5.74564329257276,2.33931608445408,2.79332370262788,2.67803664896381,1.54413993383661,0.927471342481686 | |||
|short_description=p5@Rab6b | |||
}} |
Latest revision as of 01:45, 26 September 2015
Short description: | p5@Rab6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rab6b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000035155, NM_173781, uc009rgf.1_5end |
EntrezGene: | Rab6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-15 | 23 |
neuron | 2.67e-14 | 33 |
neuronal stem cell | 2.67e-14 | 33 |
neuroblast | 2.67e-14 | 33 |
electrically signaling cell | 2.67e-14 | 33 |
electrically responsive cell | 1.56e-10 | 39 |
electrically active cell | 1.56e-10 | 39 |
neural cell | 2.55e-09 | 43 |
ectodermal cell | 6.85e-09 | 44 |
neurectodermal cell | 6.85e-09 | 44 |