FFCP PHASE1:Mm9::chr9:37175212..37175241,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=72927|HGNC=|MCL_coexpression_id=283|UniProt=B2RSY3,Q640R3|association_with_transcript=21bp_to_NM_175189,uc009our.1_5end|description=CAGE_peak_1_at_Hepacam_5end|id=chr9:37175212..37175241,+|ontology_enrichment_celltype=CL:0000221!6.94e-17!44;CL:0000133!6.94e-17!44;CL:0002319!2.73e-16!43;CL:0000117!2.44e-14!23;CL:0000337!2.44e-14!23;CL:0000055!5.75e-12!50;CL:0000540!3.68e-10!33;CL:0000047!3.68e-10!33;CL:0000031!3.68e-10!33;CL:0000404!3.68e-10!33;CL:0002453!8.05e-08!8;CL:0000333!9.60e-08!10;CL:0000095!9.60e-08!10;CL:0000243!9.60e-08!10;CL:0000123!9.60e-08!10;CL:0000125!9.60e-08!10;CL:0000030!9.60e-08!10;CL:0000339!9.60e-08!10;CL:0000393!3.79e-07!39;CL:0000211!3.79e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,3.40e-16,44;CL:0000133,3.40e-16,44;CL:0002319,1.66e-15,43;CL:0000117,4.15e-15,23;CL:0000337,4.15e-15,23;CL:0002453,2.26e-09,8;CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000333,3.35e-08,10;CL:0000095,3.35e-08,10;CL:0000243,3.35e-08,10;CL:0000123,3.35e-08,10;CL:0000125,3.35e-08,10;CL:0000030,3.35e-08,10;CL:0000339,3.35e-08,10;CL:0000128,2.97e-07,6;CL:0000126,2.97e-07,6;CL:0000127,2.97e-07,6;CL:0000393,9.05e-07,39;CL:0000211,9.05e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.82e-34!75;UBERON:0001016!7.82e-34!75;UBERON:0001017!2.07e-33!73;UBERON:0005743!2.07e-33!73;UBERON:0001049!7.88e-29!52;UBERON:0005068!7.88e-29!52;UBERON:0006241!7.88e-29!52;UBERON:0007135!7.88e-29!52;UBERON:0000955!1.93e-27!50;UBERON:0006238!1.93e-27!50;UBERON:0002616!1.20e-26!49;UBERON:0004121!3.90e-26!102;UBERON:0000924!3.90e-26!102;UBERON:0006601!3.90e-26!102;UBERON:0000033!1.50e-25!63;UBERON:0002020!4.21e-22!34;UBERON:0002346!3.58e-21!71;UBERON:0003075!3.58e-21!71;UBERON:0007284!3.58e-21!71;UBERON:0003080!3.67e-19!40;UBERON:0002791!1.79e-18!29;UBERON:0003528!1.79e-18!29;UBERON:0001893!1.79e-18!29;UBERON:0002780!2.60e-18!39;UBERON:0001890!2.60e-18!39;UBERON:0006240!2.60e-18!39;UBERON:0003056!2.19e-17!49;UBERON:0007811!5.80e-14!86;UBERON:0000956!5.29e-13!21;UBERON:0001869!5.29e-13!21;UBERON:0000203!5.29e-13!21;UBERON:0002619!6.03e-12!17;UBERON:0000153!4.70e-11!94;UBERON:0003076!2.43e-10!12;UBERON:0003057!2.43e-10!12;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-34,73;UBERON:0001016,4.43e-34,75;UBERON:0000073,1.51e-32,54;UBERON:0001049,1.71e-30,52;UBERON:0005068,1.71e-30,52;UBERON:0006241,1.71e-30,52;UBERON:0007135,1.71e-30,52;UBERON:0004121,5.25e-26,95;UBERON:0000924,5.25e-26,95;UBERON:0006601,5.25e-26,95;UBERON:0000955,1.08e-25,47;UBERON:0006238,1.08e-25,47;UBERON:0002616,9.08e-25,46;UBERON:0002020,1.24e-24,34;UBERON:0002346,3.66e-24,64;UBERON:0003075,3.66e-24,64;UBERON:0007284,3.66e-24,64;UBERON:0010371,2.98e-21,73;UBERON:0003528,3.57e-20,29;UBERON:0002791,3.57e-20,29;UBERON:0001893,3.57e-20,29;UBERON:0003080,5.42e-19,40;UBERON:0002780,5.33e-18,39;UBERON:0001890,5.33e-18,39;UBERON:0006240,5.33e-18,39;UBERON:0003056,1.42e-15,49;UBERON:0002619,1.63e-14,17;UBERON:0010314,1.74e-13,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0003076,1.64e-12,12;UBERON:0003057,1.64e-12,12;UBERON:0002021,3.14e-09,10;UBERON:0000411,3.14e-09,10;UBERON:0001950,3.14e-09,10;UBERON:0002420,5.57e-08,8;UBERON:0007245,5.57e-08,8;UBERON:0010009,5.57e-08,8;UBERON:0010011,5.57e-08,8;UBERON:0000454,5.57e-08,8;UBERON:0004733,2.97e-07,6;UBERON:0004732,2.97e-07,6;UBERON:0002028,2.97e-07,6;UBERON:0007277,2.97e-07,6;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,121.87606241667,122.145517600366,80.6884081158276,62.0139847800356,153.81524387052,0,0,0,0,0,0,7.68802551266472,6.34789175126439,6.33831403506179,4.74382344896785,5.33576877666684,0,0.988866362566974,0,87.1836321608558,217.467560812,0.622137673850866,0.810035629990144,1.26194976810829,67.1279813348938,65.156219580726,3.30725157880376,2.49198224647415,5.51531271966013,89.1938636095048,70.8664726372792,90.0134284881587,6.72620067423989,6.58711033937349,8.85552729946492,84.5924486974184,74.8474271342134,73.4959571806457,40.6587447953661,39.2945839005524,15.4711540034999,0.302904773332736,1.058001841495,0,0,0,0,0,0,1.68533304158102,0,0,0,10.7040999030277,0,0,0,0,0,0,1.94112595522402,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,65.5828985305866,71.0024336097613,0,0,0,0,106.351353977424,69.5400916284312,17.3403005915753,53.7117149394134,42.1930504595045,91.0111635170873,90.0439010026055,0,0,0,2.52530227063769,0,0,0,0,0.204109497453984,0.512454881139399,0.655912071918102,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,27.5784361176482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,135.183596769721,127.409103325725,0,1.00988370881749,0,0,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,53.9819811588636,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0,0.891844088010353,0.493647061806363,2.74018454203139,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0,163.359691071259,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,1.17183946359555,1.36317147753424,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,32.1908550291728,29.4608151364593,30.363462212288,26.1216837162405,29.4585483501376,38.5250887668747,39.8263275136765,30.621841819247,36.7045351277206,26.9235362110946,0,0,0.341467211508268,0.486213434136588,0.838452650511929,0.735374033800057,1.77797382241292,1.85431551515005,1.60459604795908,2.02157769411038,1.2673964994512,2.07488975524684,1.77918864192777,2.11283002936069,2.41228969613576,3.81034953026459,1.85414921511769,1.35036454324594,1.64834360321323,3.23837624295674,1.37147700954166,1.24233064311536,2.14592570952589,3.0522747492789,2.72917203204459,2.28459441307527,2.37806364734604,2.63069711437843,2.17286582153379,1.12228454331548,2.25406534435931,1.0835493061312,1.22769312950907,3.25367366490529,2.70069255373598,5.9954538705107,1.63752125911786,3.00819475667618,2.86932498103265,2.8676884485537,4.17362104116759|short_description=p1@Hepacam}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72927 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt=B2RSY3,Q640R3 | |||
|association_with_transcript=21bp_to_NM_175189,uc009our.1_5end | |||
|cluster_id=chr9:37175212..37175241,+ | |||
|description=CAGE_peak_1_at_Hepacam_5end | |||
|id=chr9:37175212..37175241,+ | |||
|ontology_enrichment_celltype=CL:0000221!6.94e-17!44;CL:0000133!6.94e-17!44;CL:0002319!2.73e-16!43;CL:0000117!2.44e-14!23;CL:0000337!2.44e-14!23;CL:0000055!5.75e-12!50;CL:0000540!3.68e-10!33;CL:0000047!3.68e-10!33;CL:0000031!3.68e-10!33;CL:0000404!3.68e-10!33;CL:0002453!8.05e-08!8;CL:0000333!9.60e-08!10;CL:0000095!9.60e-08!10;CL:0000243!9.60e-08!10;CL:0000123!9.60e-08!10;CL:0000125!9.60e-08!10;CL:0000030!9.60e-08!10;CL:0000339!9.60e-08!10;CL:0000393!3.79e-07!39;CL:0000211!3.79e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.40e-16,44;CL:0000133,3.40e-16,44;CL:0002319,1.66e-15,43;CL:0000117,4.15e-15,23;CL:0000337,4.15e-15,23;CL:0002453,2.26e-09,8;CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000333,3.35e-08,10;CL:0000095,3.35e-08,10;CL:0000243,3.35e-08,10;CL:0000123,3.35e-08,10;CL:0000125,3.35e-08,10;CL:0000030,3.35e-08,10;CL:0000339,3.35e-08,10;CL:0000128,2.97e-07,6;CL:0000126,2.97e-07,6;CL:0000127,2.97e-07,6;CL:0000393,9.05e-07,39;CL:0000211,9.05e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.82e-34!75;UBERON:0001016!7.82e-34!75;UBERON:0001017!2.07e-33!73;UBERON:0005743!2.07e-33!73;UBERON:0001049!7.88e-29!52;UBERON:0005068!7.88e-29!52;UBERON:0006241!7.88e-29!52;UBERON:0007135!7.88e-29!52;UBERON:0000955!1.93e-27!50;UBERON:0006238!1.93e-27!50;UBERON:0002616!1.20e-26!49;UBERON:0004121!3.90e-26!102;UBERON:0000924!3.90e-26!102;UBERON:0006601!3.90e-26!102;UBERON:0000033!1.50e-25!63;UBERON:0002020!4.21e-22!34;UBERON:0002346!3.58e-21!71;UBERON:0003075!3.58e-21!71;UBERON:0007284!3.58e-21!71;UBERON:0003080!3.67e-19!40;UBERON:0002791!1.79e-18!29;UBERON:0003528!1.79e-18!29;UBERON:0001893!1.79e-18!29;UBERON:0002780!2.60e-18!39;UBERON:0001890!2.60e-18!39;UBERON:0006240!2.60e-18!39;UBERON:0003056!2.19e-17!49;UBERON:0007811!5.80e-14!86;UBERON:0000956!5.29e-13!21;UBERON:0001869!5.29e-13!21;UBERON:0000203!5.29e-13!21;UBERON:0002619!6.03e-12!17;UBERON:0000153!4.70e-11!94;UBERON:0003076!2.43e-10!12;UBERON:0003057!2.43e-10!12;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-34,73;UBERON:0001016,4.43e-34,75;UBERON:0000073,1.51e-32,54;UBERON:0001049,1.71e-30,52;UBERON:0005068,1.71e-30,52;UBERON:0006241,1.71e-30,52;UBERON:0007135,1.71e-30,52;UBERON:0004121,5.25e-26,95;UBERON:0000924,5.25e-26,95;UBERON:0006601,5.25e-26,95;UBERON:0000955,1.08e-25,47;UBERON:0006238,1.08e-25,47;UBERON:0002616,9.08e-25,46;UBERON:0002020,1.24e-24,34;UBERON:0002346,3.66e-24,64;UBERON:0003075,3.66e-24,64;UBERON:0007284,3.66e-24,64;UBERON:0010371,2.98e-21,73;UBERON:0003528,3.57e-20,29;UBERON:0002791,3.57e-20,29;UBERON:0001893,3.57e-20,29;UBERON:0003080,5.42e-19,40;UBERON:0002780,5.33e-18,39;UBERON:0001890,5.33e-18,39;UBERON:0006240,5.33e-18,39;UBERON:0003056,1.42e-15,49;UBERON:0002619,1.63e-14,17;UBERON:0010314,1.74e-13,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0003076,1.64e-12,12;UBERON:0003057,1.64e-12,12;UBERON:0002021,3.14e-09,10;UBERON:0000411,3.14e-09,10;UBERON:0001950,3.14e-09,10;UBERON:0002420,5.57e-08,8;UBERON:0007245,5.57e-08,8;UBERON:0010009,5.57e-08,8;UBERON:0010011,5.57e-08,8;UBERON:0000454,5.57e-08,8;UBERON:0004733,2.97e-07,6;UBERON:0004732,2.97e-07,6;UBERON:0002028,2.97e-07,6;UBERON:0007277,2.97e-07,6;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6 | |||
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,121.87606241667,122.145517600366,80.6884081158276,62.0139847800356,153.81524387052,0,0,0,0,0,0,7.68802551266472,6.34789175126439,6.33831403506179,4.74382344896785,5.33576877666684,0,0.988866362566974,0,87.1836321608558,217.467560812,0.622137673850866,0.810035629990144,1.26194976810829,67.1279813348938,65.156219580726,3.30725157880376,2.49198224647415,5.51531271966013,89.1938636095048,70.8664726372792,90.0134284881587,6.72620067423989,6.58711033937349,8.85552729946492,84.5924486974184,74.8474271342134,73.4959571806457,40.6587447953661,39.2945839005524,15.4711540034999,0.302904773332736,1.058001841495,0,0,0,0,0,0,1.68533304158102,0,0,0,10.7040999030277,0,0,0,0,0,0,1.94112595522402,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,65.5828985305866,71.0024336097613,0,0,0,0,106.351353977424,69.5400916284312,17.3403005915753,53.7117149394134,42.1930504595045,91.0111635170873,90.0439010026055,0,0,0,2.52530227063769,0,0,0,0,0.204109497453984,0.512454881139399,0.655912071918102,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,27.5784361176482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,135.183596769721,127.409103325725,0,1.00988370881749,0,0,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,53.9819811588636,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0,0.891844088010353,0.493647061806363,2.74018454203139,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0,163.359691071259,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,1.17183946359555,1.36317147753424,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,32.1908550291728,29.4608151364593,30.363462212288,26.1216837162405,29.4585483501376,38.5250887668747,39.8263275136765,30.621841819247,36.7045351277206,26.9235362110946,0,0,0.341467211508268,0.486213434136588,0.838452650511929,0.735374033800057,1.77797382241292,1.85431551515005,1.60459604795908,2.02157769411038,1.2673964994512,2.07488975524684,1.77918864192777,2.11283002936069,2.41228969613576,3.81034953026459,1.85414921511769,1.35036454324594,1.64834360321323,3.23837624295674,1.37147700954166,1.24233064311536,2.14592570952589,3.0522747492789,2.72917203204459,2.28459441307527,2.37806364734604,2.63069711437843,2.17286582153379,1.12228454331548,2.25406534435931,1.0835493061312,1.22769312950907,3.25367366490529,2.70069255373598,5.9954538705107,1.63752125911786,3.00819475667618,2.86932498103265,2.8676884485537,4.17362104116759 | |||
|short_description=p1@Hepacam | |||
}} |
Latest revision as of 14:42, 26 September 2015
Short description: | p1@Hepacam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hepacam_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 21bp_to_NM_175189, uc009our.1_5end |
EntrezGene: | Hepacam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.40e-16 | 44 |
neurectodermal cell | 3.40e-16 | 44 |
neural cell | 1.66e-15 | 43 |
CNS neuron (sensu Vertebrata) | 4.15e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-15 | 23 |
oligodendrocyte precursor cell | 2.26e-09 | 8 |
neuron | 3.36e-09 | 33 |
neuronal stem cell | 3.36e-09 | 33 |
neuroblast | 3.36e-09 | 33 |
electrically signaling cell | 3.36e-09 | 33 |
migratory neural crest cell | 3.35e-08 | 10 |
neuron associated cell | 3.35e-08 | 10 |
glial cell (sensu Vertebrata) | 3.35e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.35e-08 | 10 |
glial cell | 3.35e-08 | 10 |
glioblast | 3.35e-08 | 10 |
glioblast (sensu Vertebrata) | 3.35e-08 | 10 |
oligodendrocyte | 2.97e-07 | 6 |
macroglial cell | 2.97e-07 | 6 |
astrocyte | 2.97e-07 | 6 |
electrically responsive cell | 9.05e-07 | 39 |
electrically active cell | 9.05e-07 | 39 |