FFCP PHASE1:Mm9::chrX:70905174..70905216,-: Difference between revisions
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{{FFCP|EntrezGene=93843|HGNC=|MCL_coexpression_id=13|UniProt=Q3TYC1,Q3UYI0,Q9QYK9|association_with_transcript=0bp_to_NM_001199351,NM_012040,uc009tmc.2,uc009tmd.2_5end|description=CAGE_peak_2_at_Pnck_5end|id=chrX:70905174..70905216,-|ontology_enrichment_celltype=CL:0000117!6.28e-15!23;CL:0000337!6.28e-15!23;CL:0000540!1.70e-12!33;CL:0000047!1.70e-12!33;CL:0000031!1.70e-12!33;CL:0000404!1.70e-12!33;CL:0000393!8.92e-09!39;CL:0000211!8.92e-09!39;CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0002319!4.31e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,7.64e-21,23;CL:0000337,7.64e-21,23;CL:0000540,4.03e-13,33;CL:0000047,4.03e-13,33;CL:0000031,4.03e-13,33;CL:0000404,4.03e-13,33;CL:0000393,9.19e-10,39;CL:0000211,9.19e-10,39;CL:0000221,1.44e-08,44;CL:0000133,1.44e-08,44;CL:0002319,4.28e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.37e-23!73;UBERON:0005743!7.37e-23!73;UBERON:0002346!1.92e-22!71;UBERON:0003075!1.92e-22!71;UBERON:0007284!1.92e-22!71;UBERON:0001049!7.45e-22!52;UBERON:0005068!7.45e-22!52;UBERON:0006241!7.45e-22!52;UBERON:0007135!7.45e-22!52;UBERON:0000073!1.05e-21!75;UBERON:0001016!1.05e-21!75;UBERON:0000033!5.40e-21!63;UBERON:0000955!6.32e-20!50;UBERON:0006238!6.32e-20!50;UBERON:0002616!2.15e-19!49;UBERON:0004121!6.21e-19!102;UBERON:0000924!6.21e-19!102;UBERON:0006601!6.21e-19!102;UBERON:0003056!1.00e-18!49;UBERON:0002020!1.15e-17!34;UBERON:0003080!3.59e-17!40;UBERON:0002780!1.73e-16!39;UBERON:0001890!1.73e-16!39;UBERON:0006240!1.73e-16!39;UBERON:0002791!5.75e-14!29;UBERON:0003528!5.75e-14!29;UBERON:0001893!5.75e-14!29;UBERON:0000153!1.61e-10!94;UBERON:0007811!3.04e-10!86;UBERON:0000956!8.01e-09!21;UBERON:0001869!8.01e-09!21;UBERON:0000203!8.01e-09!21;UBERON:0002619!1.79e-07!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.18e-33,54;UBERON:0001049,2.06e-31,52;UBERON:0005068,2.06e-31,52;UBERON:0006241,2.06e-31,52;UBERON:0007135,2.06e-31,52;UBERON:0002346,5.15e-29,64;UBERON:0003075,5.15e-29,64;UBERON:0007284,5.15e-29,64;UBERON:0001017,1.38e-28,73;UBERON:0001016,2.78e-27,75;UBERON:0000955,7.18e-26,47;UBERON:0006238,7.18e-26,47;UBERON:0002020,7.67e-26,34;UBERON:0010371,1.04e-25,73;UBERON:0002616,4.09e-25,46;UBERON:0003080,1.10e-23,40;UBERON:0004121,1.26e-23,95;UBERON:0000924,1.26e-23,95;UBERON:0006601,1.26e-23,95;UBERON:0003056,1.52e-23,49;UBERON:0002780,1.06e-22,39;UBERON:0001890,1.06e-22,39;UBERON:0006240,1.06e-22,39;UBERON:0003528,1.94e-20,29;UBERON:0002791,1.94e-20,29;UBERON:0001893,1.94e-20,29;UBERON:0010314,3.50e-17,92;UBERON:0000956,6.43e-13,21;UBERON:0001869,6.43e-13,21;UBERON:0000203,6.43e-13,21;UBERON:0002619,5.58e-11,17;UBERON:0002021,5.16e-10,10;UBERON:0000411,5.16e-10,10;UBERON:0001950,5.16e-10,10;UBERON:0002420,5.65e-09,8;UBERON:0007245,5.65e-09,8;UBERON:0010009,5.65e-09,8;UBERON:0010011,5.65e-09,8;UBERON:0000454,5.65e-09,8;UBERON:0003076,5.01e-08,12;UBERON:0003057,5.01e-08,12;UBERON:0002240,1.90e-07,6;UBERON:0005174,1.90e-07,6;UBERON:0001137,1.90e-07,6;UBERON:0001948,9.91e-07,5;UBERON:0002315,9.91e-07,5|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,18.2084814773638,29.6234948392338,12.6766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,2.43010688997043,1.47227472945967,30.564655331207,28.7129103237098,3.30725157880376,3.35459148563827,2.75765635983006,12.1127469099328,10.7257363991558,11.8277030607307,19.7829431595291,18.2060410768795,14.5855743755893,15.355064945076,23.0732670112989,21.2389564409766,25.3380583507354,18.6506901846825,19.7583412574819,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0,0,0,4.39171195517321,3.77004072264219,0,0,0,0.127070227073065,17.6752954497691,10.980014467647,10.3036568732549,7.30062144807561,9.71718737855256,15.7918913865266,15.0884374653015,0.712875546952214,0.124406970610093,0.505445516867349,0.631325567659422,0.780722657776222,0.459804208866946,1.26043490863744,1.35634336052144,2.24520447199382,1.66547836370305,2.62364828767241,1.81092359517311,0.646703978798527,1.32374256117473,2.46331573829528,1.7535658594206,1.39023624612799,0.348252166522167,0,0.796137067273973,0,0,0.284163499395593,0,0.703578179943289,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0,5.46753866266731,4.42489833230923,0,0,1.2797295032114,0.696710015581316,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.948339504765408,0.9139881008778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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93843 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TYC1,Q3UYI0,Q9QYK9 | |||
|association_with_transcript=0bp_to_NM_001199351,NM_012040,uc009tmc.2,uc009tmd.2_5end | |||
|cluster_id=chrX:70905174..70905216,- | |||
|description=CAGE_peak_2_at_Pnck_5end | |||
|id=chrX:70905174..70905216,- | |||
|ontology_enrichment_celltype=CL:0000117!6.28e-15!23;CL:0000337!6.28e-15!23;CL:0000540!1.70e-12!33;CL:0000047!1.70e-12!33;CL:0000031!1.70e-12!33;CL:0000404!1.70e-12!33;CL:0000393!8.92e-09!39;CL:0000211!8.92e-09!39;CL:0000221!1.91e-07!44;CL:0000133!1.91e-07!44;CL:0002319!4.31e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.64e-21,23;CL:0000337,7.64e-21,23;CL:0000540,4.03e-13,33;CL:0000047,4.03e-13,33;CL:0000031,4.03e-13,33;CL:0000404,4.03e-13,33;CL:0000393,9.19e-10,39;CL:0000211,9.19e-10,39;CL:0000221,1.44e-08,44;CL:0000133,1.44e-08,44;CL:0002319,4.28e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.37e-23!73;UBERON:0005743!7.37e-23!73;UBERON:0002346!1.92e-22!71;UBERON:0003075!1.92e-22!71;UBERON:0007284!1.92e-22!71;UBERON:0001049!7.45e-22!52;UBERON:0005068!7.45e-22!52;UBERON:0006241!7.45e-22!52;UBERON:0007135!7.45e-22!52;UBERON:0000073!1.05e-21!75;UBERON:0001016!1.05e-21!75;UBERON:0000033!5.40e-21!63;UBERON:0000955!6.32e-20!50;UBERON:0006238!6.32e-20!50;UBERON:0002616!2.15e-19!49;UBERON:0004121!6.21e-19!102;UBERON:0000924!6.21e-19!102;UBERON:0006601!6.21e-19!102;UBERON:0003056!1.00e-18!49;UBERON:0002020!1.15e-17!34;UBERON:0003080!3.59e-17!40;UBERON:0002780!1.73e-16!39;UBERON:0001890!1.73e-16!39;UBERON:0006240!1.73e-16!39;UBERON:0002791!5.75e-14!29;UBERON:0003528!5.75e-14!29;UBERON:0001893!5.75e-14!29;UBERON:0000153!1.61e-10!94;UBERON:0007811!3.04e-10!86;UBERON:0000956!8.01e-09!21;UBERON:0001869!8.01e-09!21;UBERON:0000203!8.01e-09!21;UBERON:0002619!1.79e-07!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.18e-33,54;UBERON:0001049,2.06e-31,52;UBERON:0005068,2.06e-31,52;UBERON:0006241,2.06e-31,52;UBERON:0007135,2.06e-31,52;UBERON:0002346,5.15e-29,64;UBERON:0003075,5.15e-29,64;UBERON:0007284,5.15e-29,64;UBERON:0001017,1.38e-28,73;UBERON:0001016,2.78e-27,75;UBERON:0000955,7.18e-26,47;UBERON:0006238,7.18e-26,47;UBERON:0002020,7.67e-26,34;UBERON:0010371,1.04e-25,73;UBERON:0002616,4.09e-25,46;UBERON:0003080,1.10e-23,40;UBERON:0004121,1.26e-23,95;UBERON:0000924,1.26e-23,95;UBERON:0006601,1.26e-23,95;UBERON:0003056,1.52e-23,49;UBERON:0002780,1.06e-22,39;UBERON:0001890,1.06e-22,39;UBERON:0006240,1.06e-22,39;UBERON:0003528,1.94e-20,29;UBERON:0002791,1.94e-20,29;UBERON:0001893,1.94e-20,29;UBERON:0010314,3.50e-17,92;UBERON:0000956,6.43e-13,21;UBERON:0001869,6.43e-13,21;UBERON:0000203,6.43e-13,21;UBERON:0002619,5.58e-11,17;UBERON:0002021,5.16e-10,10;UBERON:0000411,5.16e-10,10;UBERON:0001950,5.16e-10,10;UBERON:0002420,5.65e-09,8;UBERON:0007245,5.65e-09,8;UBERON:0010009,5.65e-09,8;UBERON:0010011,5.65e-09,8;UBERON:0000454,5.65e-09,8;UBERON:0003076,5.01e-08,12;UBERON:0003057,5.01e-08,12;UBERON:0002240,1.90e-07,6;UBERON:0005174,1.90e-07,6;UBERON:0001137,1.90e-07,6;UBERON:0001948,9.91e-07,5;UBERON:0002315,9.91e-07,5 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,18.2084814773638,29.6234948392338,12.6766280701236,0,0,0,0,0,0.299600110518405,0,2.28117147078651,2.43010688997043,1.47227472945967,30.564655331207,28.7129103237098,3.30725157880376,3.35459148563827,2.75765635983006,12.1127469099328,10.7257363991558,11.8277030607307,19.7829431595291,18.2060410768795,14.5855743755893,15.355064945076,23.0732670112989,21.2389564409766,25.3380583507354,18.6506901846825,19.7583412574819,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,2.81686839553361,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.304465478312141,1.15307748628029,0.60289056221049,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0,0,0,4.39171195517321,3.77004072264219,0,0,0,0.127070227073065,17.6752954497691,10.980014467647,10.3036568732549,7.30062144807561,9.71718737855256,15.7918913865266,15.0884374653015,0.712875546952214,0.124406970610093,0.505445516867349,0.631325567659422,0.780722657776222,0.459804208866946,1.26043490863744,1.35634336052144,2.24520447199382,1.66547836370305,2.62364828767241,1.81092359517311,0.646703978798527,1.32374256117473,2.46331573829528,1.7535658594206,1.39023624612799,0.348252166522167,0,0.796137067273973,0,0,0.284163499395593,0,0.703578179943289,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0,5.46753866266731,4.42489833230923,0,0,1.2797295032114,0.696710015581316,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.948339504765408,0.913988100877831,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.316182685621286,0,0,0.246794327843601,0,0,0.393117990226406,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.169745085775188,1.17345124144251,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0,9.31193421929193,12.0728037189969,0,0,0.94652465824877,0,0.646270193198397,0.477937595905104,0.445597348164788,0.566153061577665,0.809621403349789,0,0.395287777946524,3.85585579706168,0.425820255624806,1.42452482933804,1.14020871547503,0.659880491890142,0,0.728341908464944,0.604647113929502,0,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.540183282093931,2.32845630808958,1.28602221018955,1.24138163549592,1.78368817602071,2.79733335023606,2.13125464380219,0,0.21183207086382,0.441056796109924,0,0,0,0,0.164140899745061,0,7.6024373824309,0,0.619160603889667,0.185194527369712,0,0,0,0.169978429993855,0.279902904647316,0,0,0.790839983952838,0.813277868507395,1.08005340821801,0.418176592028937,0.87345025498471,0.944050424693745,0.909188012978695,0,0.129614973291793,0,0.56369293868419,0.448549638131936,0.165458490457098,1.36115831840833,0.904118764344118,0.844780627453891,0.58678619322877,0.5208175393758,0.524296722128554,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0,0.501572104035363,12.9892923801925,17.9526842237799,18.3326564300607,14.7793736815571,8.22099023724771,12.0863023582352,13.5004500046361,6.30449684513909,7.70342095273148,11.39072685854,0.31136204275253,1.19707462020309,1.36586884603307,1.94485373654635,2.09613162627982,3.30918315210025,2.22246727801615,3.09052585858341,0.64183841918363,2.02157769411038,3.04175159868288,2.26351609663291,2.52832070168682,2.17685518176556,1.95280594449085,0.476293691283074,3.1288768005111,2.50781986602817,3.70877310722976,2.64958056241915,2.74295401908332,3.37204031702741,2.62279808942053,2.61623549938191,2.54095327121393,1.94613598150856,2.56099162021882,2.89376682581627,3.39510284614654,5.05028044491965,2.72860541685601,2.1670986122624,2.45538625901814,2.16911577660352,1.92906610981141,4.74640098082097,2.10538447600868,2.36358159453128,1.3390183244819,1.32354851471709,0.463735671240843 | |||
|short_description=p2@Pnck | |||
}} |
Latest revision as of 23:46, 1 October 2015
Short description: | p2@Pnck |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pnck_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_NM_001199351, NM_012040, uc009tmc.2, uc009tmd.2_5end |
EntrezGene: | Pnck |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.64e-21 | 23 |
neuroblast (sensu Vertebrata) | 7.64e-21 | 23 |
neuron | 4.03e-13 | 33 |
neuronal stem cell | 4.03e-13 | 33 |
neuroblast | 4.03e-13 | 33 |
electrically signaling cell | 4.03e-13 | 33 |
electrically responsive cell | 9.19e-10 | 39 |
electrically active cell | 9.19e-10 | 39 |
ectodermal cell | 1.44e-08 | 44 |
neurectodermal cell | 1.44e-08 | 44 |
neural cell | 4.28e-08 | 43 |