FFCP PHASE1:Mm9::chr14:122879279..122879285,+: Difference between revisions
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|id=chr14:122879279..122879285,+
|short_description=p@chr14:122879279..122879285,+
|description=CAGE_peak_at_chr14:122879279..122879285,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=671 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:122879279..122879285,+ | |||
|description=CAGE_peak_at_chr14:122879279..122879285,+ | |||
|id=chr14:122879279..122879285,+ | |||
|ontology_enrichment_celltype=CL:0002319!8.90e-10!43;CL:0000117!2.15e-09!23;CL:0000337!2.15e-09!23;CL:0000221!2.30e-09!44;CL:0000133!2.30e-09!44;CL:0000055!2.86e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.32e-11,43;CL:0002453,4.25e-11,8;CL:0000221,4.78e-11,44;CL:0000133,4.78e-11,44;CL:0002613,6.64e-11,3;CL:0000333,8.00e-09,10;CL:0000095,8.00e-09,10;CL:0000243,8.00e-09,10;CL:0000123,8.00e-09,10;CL:0000125,8.00e-09,10;CL:0000030,8.00e-09,10;CL:0000339,8.00e-09,10;CL:0000117,1.59e-08,23;CL:0000337,1.59e-08,23;CL:0000878,3.14e-08,2;CL:0000129,3.14e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.22e-27!63;UBERON:0001017!2.07e-22!73;UBERON:0005743!2.07e-22!73;UBERON:0000073!3.19e-22!75;UBERON:0001016!3.19e-22!75;UBERON:0000955!3.26e-22!50;UBERON:0006238!3.26e-22!50;UBERON:0003056!1.79e-21!49;UBERON:0001049!2.17e-21!52;UBERON:0005068!2.17e-21!52;UBERON:0006241!2.17e-21!52;UBERON:0007135!2.17e-21!52;UBERON:0002346!2.30e-21!71;UBERON:0003075!2.30e-21!71;UBERON:0007284!2.30e-21!71;UBERON:0002616!3.44e-21!49;UBERON:0004121!6.51e-20!102;UBERON:0000924!6.51e-20!102;UBERON:0006601!6.51e-20!102;UBERON:0003080!1.38e-15!40;UBERON:0000153!1.49e-15!94;UBERON:0007811!1.95e-15!86;UBERON:0002780!3.29e-15!39;UBERON:0001890!3.29e-15!39;UBERON:0006240!3.29e-15!39;UBERON:0002020!8.02e-11!34;UBERON:0002791!5.47e-09!29;UBERON:0003528!5.47e-09!29;UBERON:0001893!5.47e-09!29;UBERON:0001894!5.77e-08!10;UBERON:0006222!5.77e-08!10;UBERON:0000970!5.31e-07!9;UBERON:0000019!5.31e-07!9;UBERON:0000047!5.31e-07!9;UBERON:0004088!5.31e-07!9;UBERON:0002104!5.31e-07!9;UBERON:0001456!5.31e-07!9;UBERON:0003072!5.31e-07!9;UBERON:0003071!5.31e-07!9;UBERON:0004128!5.31e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.70e-19,73;UBERON:0001016,1.13e-18,75;UBERON:0000955,8.64e-16,47;UBERON:0006238,8.64e-16,47;UBERON:0004121,2.05e-15,95;UBERON:0000924,2.05e-15,95;UBERON:0006601,2.05e-15,95;UBERON:0000073,3.38e-15,54;UBERON:0002616,5.68e-14,46;UBERON:0001049,5.02e-12,52;UBERON:0005068,5.02e-12,52;UBERON:0006241,5.02e-12,52;UBERON:0007135,5.02e-12,52;UBERON:0002346,1.19e-10,64;UBERON:0003075,1.19e-10,64;UBERON:0007284,1.19e-10,64;UBERON:0002420,1.63e-10,8;UBERON:0007245,1.63e-10,8;UBERON:0010009,1.63e-10,8;UBERON:0010011,1.63e-10,8;UBERON:0000454,1.63e-10,8;UBERON:0002780,3.24e-10,39;UBERON:0001890,3.24e-10,39;UBERON:0006240,3.24e-10,39;UBERON:0003080,6.60e-10,40;UBERON:0003056,3.93e-09,49;UBERON:0002037,4.04e-09,4;UBERON:0002680,4.04e-09,4;UBERON:0001895,4.04e-09,4;UBERON:0010092,4.04e-09,4;UBERON:0006215,4.04e-09,4;UBERON:0010371,5.90e-09,73;UBERON:0001894,4.14e-08,10;UBERON:0006222,4.14e-08,10 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,3.12956537739216,0.218025156380447,0.659058548203415,1.36100929351998,1.67983705950435,0,0,0,0,0,0,0,0,2.11596391708813,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,1.49800055259202,3.84218305321555,0.207379224616955,0.540023753326763,0.420649922702764,0,0.662605622854841,0,0,0,0,1.78762273319263,1.22885226604995,1.31886287730194,4.84884511092771,1.04182674111352,1.11673199600552,1.68828783009504,0.45839474333043,0.294628585473668,0.996601765593721,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68449275218475,1.8850203613211,0,0,0,0,0.149790639404823,0,0.125654352112864,0.869121600961382,0,1.66230435647648,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,1.14951052216736,0.900310649026746,0.753524089178575,0.136072998302656,0.640568601424249,0.281105173679186,0.517406741478031,1.72454394346274,0.567318240503458,0.351902248327898,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,0.776152102696527,1.07168517515796,0.886701168211368,1.24858172321449,1.64549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.3748254587495,0,0.755393897389701,0,0.45032120322422,0,0,0.726511433089237,0.399024873401031,0.682934423016537,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,3.12956537739216,0.218025156380447,0.659058548203415,1.36100929351998,1.67983705950435,0,0,0,0,0,0,0,0,2.11596391708813,0.633831403506179,0.677689064138264,1.77858959222228,0,0,0,1.49800055259202,3.84218305321555,0.207379224616955,0.540023753326763,0.420649922702764,0,0.662605622854841,0,0,0,0,1.78762273319263,1.22885226604995,1.31886287730194,4.84884511092771,1.04182674111352,1.11673199600552,1.68828783009504,0.45839474333043,0.294628585473668,0.996601765593721,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68449275218475,1.8850203613211,0,0,0,0,0.149790639404823,0,0.125654352112864,0.869121600961382,0,1.66230435647648,0.486723789203273,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,1.14951052216736,0.900310649026746,0.753524089178575,0.136072998302656,0.640568601424249,0.281105173679186,0.517406741478031,1.72454394346274,0.567318240503458,0.351902248327898,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08036656418786,0.776152102696527,1.07168517515796,0.886701168211368,1.24858172321449,1.64549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269141569828427,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,1.3748254587495,0,0.755393897389701,0,0.45032120322422,0,0,0.726511433089237,0.399024873401031,0.682934423016537,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.169229215783353,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0.29551344712669,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr14:122879279..122879285,+ | |||
}} | }} |
Latest revision as of 00:56, 4 August 2015
Short description: | p@chr14:122879279..122879285, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:122879279..122879285, + |
Coexpression cluster: | MCL_coexpression_mm9:671 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.32e-11 | 43 |
oligodendrocyte precursor cell | 4.25e-11 | 8 |
ectodermal cell | 4.78e-11 | 44 |
neurectodermal cell | 4.78e-11 | 44 |
striatum neuron | 6.64e-11 | 3 |
migratory neural crest cell | 8.00e-09 | 10 |
neuron associated cell | 8.00e-09 | 10 |
glial cell (sensu Vertebrata) | 8.00e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 8.00e-09 | 10 |
glial cell | 8.00e-09 | 10 |
glioblast | 8.00e-09 | 10 |
glioblast (sensu Vertebrata) | 8.00e-09 | 10 |
CNS neuron (sensu Vertebrata) | 1.59e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.59e-08 | 23 |
central nervous system macrophage | 3.14e-08 | 2 |
microglial cell | 3.14e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.70e-19 | 73 |
nervous system | 1.13e-18 | 75 |
brain | 8.64e-16 | 47 |
future brain | 8.64e-16 | 47 |
ectoderm-derived structure | 2.05e-15 | 95 |
ectoderm | 2.05e-15 | 95 |
presumptive ectoderm | 2.05e-15 | 95 |
regional part of nervous system | 3.38e-15 | 54 |
regional part of brain | 5.68e-14 | 46 |
neural tube | 5.02e-12 | 52 |
neural rod | 5.02e-12 | 52 |
future spinal cord | 5.02e-12 | 52 |
neural keel | 5.02e-12 | 52 |
neurectoderm | 1.19e-10 | 64 |
neural plate | 1.19e-10 | 64 |
presumptive neural plate | 1.19e-10 | 64 |
basal ganglion | 1.63e-10 | 8 |
nuclear complex of neuraxis | 1.63e-10 | 8 |
aggregate regional part of brain | 1.63e-10 | 8 |
collection of basal ganglia | 1.63e-10 | 8 |
cerebral subcortex | 1.63e-10 | 8 |
regional part of forebrain | 3.24e-10 | 39 |
forebrain | 3.24e-10 | 39 |
future forebrain | 3.24e-10 | 39 |
anterior neural tube | 6.60e-10 | 40 |
pre-chordal neural plate | 3.93e-09 | 49 |
cerebellum | 4.04e-09 | 4 |
regional part of metencephalon | 4.04e-09 | 4 |
metencephalon | 4.04e-09 | 4 |
future metencephalon | 4.04e-09 | 4 |
rhombic lip | 4.04e-09 | 4 |
ecto-epithelium | 5.90e-09 | 73 |
diencephalon | 4.14e-08 | 10 |
future diencephalon | 4.14e-08 | 10 |