FFCP PHASE1:Mm9::chr16:15888228..15888245,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:15888228..15888245,+
|short_description=p@chr16:15888228..15888245,+
|description=CAGE_peak_at_chr16:15888228..15888245,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3031 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:15888228..15888245,+ | |||
|description=CAGE_peak_at_chr16:15888228..15888245,+ | |||
|id=chr16:15888228..15888245,+ | |||
|ontology_enrichment_celltype=CL:0000333!5.54e-10!10;CL:0000095!5.54e-10!10;CL:0000243!5.54e-10!10;CL:0000123!5.54e-10!10;CL:0000125!5.54e-10!10;CL:0000030!5.54e-10!10;CL:0000339!5.54e-10!10;CL:0000355!5.83e-10!9;CL:0000144!1.13e-09!121;CL:0000012!1.13e-09!121;CL:0002371!3.37e-09!118;CL:0002453!1.75e-08!8;CL:0000219!5.21e-08!54;CL:0000222!5.82e-08!7;CL:0000548!1.29e-07!115;CL:0000004!1.29e-07!115;CL:0000255!1.29e-07!115;CL:0000680!5.52e-07!6;CL:0000183!5.52e-07!6;CL:0000187!5.52e-07!6;CL:0000056!5.52e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.61e-24,9;CL:0002453,2.64e-19,8;CL:0000222,9.66e-18,7;CL:0000333,2.73e-15,10;CL:0000095,2.73e-15,10;CL:0000243,2.73e-15,10;CL:0000123,2.73e-15,10;CL:0000125,2.73e-15,10;CL:0000030,2.73e-15,10;CL:0000339,2.73e-15,10;CL:0000680,1.45e-14,6;CL:0000187,1.45e-14,6;CL:0000056,1.45e-14,6;CL:0002194,5.91e-14,4;CL:0000766,5.91e-14,4;CL:0000234,5.91e-14,4;CL:0000576,5.91e-14,4;CL:0000235,5.91e-14,4;CL:0000864,5.91e-14,4;CL:0002009,5.91e-14,4;CL:0000040,5.91e-14,4;CL:0000559,5.91e-14,4;CL:0000128,1.87e-13,6;CL:0000126,1.87e-13,6;CL:0000127,1.87e-13,6;CL:0002092,2.02e-11,3;CL:0002540,2.02e-11,3;CL:0000219,3.57e-11,54;CL:0002494,7.77e-11,3;CL:0000737,7.77e-11,3;CL:0000746,7.77e-11,3;CL:0000513,7.77e-11,3;CL:0000723,5.66e-09,91;CL:0000048,5.66e-09,91;CL:0000034,3.35e-08,97;CL:0000473,5.06e-08,7;CL:0000557,5.06e-08,7;CL:0002476,5.52e-08,2;CL:0002605,1.04e-07,2;CL:0002604,1.04e-07,2;CL:0000878,1.31e-07,2;CL:0000129,1.31e-07,2;CL:0002321,8.34e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.46e-11,3;DOID:4045,1.46e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!5.83e-10!9;UBERON:0002036!5.83e-10!9;UBERON:0002385!5.83e-10!9;UBERON:0000486!5.83e-10!9;UBERON:0001015!5.83e-10!9;UBERON:0004290!5.83e-10!9;UBERON:0003082!5.83e-10!9;UBERON:0002204!7.30e-10!32;UBERON:0002329!7.16e-09!11;UBERON:0003077!7.16e-09!11;UBERON:0003059!7.16e-09!11;UBERON:0007282!7.16e-09!11;UBERON:0009618!7.16e-09!11;UBERON:0007285!7.16e-09!11;UBERON:0000383!1.21e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.61e-24,9;UBERON:0002036,2.61e-24,9;UBERON:0002385,2.61e-24,9;UBERON:0000486,2.61e-24,9;UBERON:0007503,2.61e-24,9;UBERON:0001015,2.61e-24,9;UBERON:0002329,2.61e-24,9;UBERON:0003082,2.61e-24,9;UBERON:0003059,2.61e-24,9;UBERON:0007282,2.61e-24,9;UBERON:0004290,2.61e-24,9;UBERON:0009618,2.61e-24,9;UBERON:0002204,5.33e-22,32;UBERON:0000383,9.18e-22,10;UBERON:0007524,1.11e-19,11;UBERON:0003077,1.11e-19,11;UBERON:0007285,1.11e-19,11;UBERON:0002371,6.56e-10,16;UBERON:0000055,4.04e-07,5;UBERON:0007500,4.04e-07,5;UBERON:0001981,4.04e-07,5;UBERON:0002049,4.04e-07,5;UBERON:0007798,4.04e-07,5;UBERON:0004537,4.04e-07,5;UBERON:0006965,4.04e-07,5;UBERON:0001474,5.77e-07,22;UBERON:0004765,5.77e-07,22;UBERON:0001434,5.77e-07,22 | |||
|phase1_expression=0.160148847104794,0,0,0.90739263392049,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.0850432901510698,0.198581902401771,0,0.319984845586813,0,0,0,0.215471232685889,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,4.60384793810598,3.1253413780952,3.14114246384279,6.47054636834116,6.14740936462601,3.88408282424923,3.77690453926732,3.75094645512204,0.550640256485045,0.782391344348039,1.52617609466313,1.75748946187577,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,2.82985379639542,2.0057340795713,3.09403255366465,0,0,0,0.677689064138264,0.889294796111139,2.6996991518442,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.605809546665472,0.68014404096107,3.18850937571846,0.860423876981386,1.3599426674155,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0.433947175744535,4.52373851817817,1.63171705145613,0,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.563047426353546,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0.476872379894642,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0.90739263392049,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0,0,0,0.0850432901510698,0.198581902401771,0,0.319984845586813,0,0,0,0.215471232685889,0.570070258369122,0,0,0,0,0,0,0,0.204169356262369,4.60384793810598,3.1253413780952,3.14114246384279,6.47054636834116,6.14740936462601,3.88408282424923,3.77690453926732,3.75094645512204,0.550640256485045,0.782391344348039,1.52617609466313,1.75748946187577,3.11087838518853,1.39986421625363,1.43752564364972,0,0,0,2.82985379639542,2.0057340795713,3.09403255366465,0,0,0,0.677689064138264,0.889294796111139,2.6996991518442,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.605809546665472,0.68014404096107,3.18850937571846,0.860423876981386,1.3599426674155,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,1.1981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0,0.494096864172033,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.482354319504834,0,0,0,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0.433947175744535,4.52373851817817,1.63171705145613,0,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0,0.222798674082394,0.566153061577665,0.404810701674894,0.292255857911312,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0.0897138566094757,0,0,0.563047426353546,0.183151624267265,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0.476872379894642,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:15888228..15888245,+ | |||
}} | }} |
Latest revision as of 02:01, 6 August 2015
Short description: | p@chr16:15888228..15888245, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:15888228..15888245, + |
Coexpression cluster: | MCL_coexpression_mm9:3031 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.61e-24 | 9 |
striated muscle tissue | 2.61e-24 | 9 |
muscle tissue | 2.61e-24 | 9 |
multilaminar epithelium | 2.61e-24 | 9 |
epithelial vesicle | 2.61e-24 | 9 |
musculature | 2.61e-24 | 9 |
somite | 2.61e-24 | 9 |
myotome | 2.61e-24 | 9 |
presomitic mesoderm | 2.61e-24 | 9 |
presumptive segmental plate | 2.61e-24 | 9 |
dermomyotome | 2.61e-24 | 9 |
trunk paraxial mesoderm | 2.61e-24 | 9 |
musculoskeletal system | 5.33e-22 | 32 |
musculature of body | 9.18e-22 | 10 |
dense mesenchyme tissue | 1.11e-19 | 11 |
paraxial mesoderm | 1.11e-19 | 11 |
presumptive paraxial mesoderm | 1.11e-19 | 11 |
bone marrow | 6.56e-10 | 16 |
vessel | 4.04e-07 | 5 |
epithelial tube open at both ends | 4.04e-07 | 5 |
blood vessel | 4.04e-07 | 5 |
vasculature | 4.04e-07 | 5 |
vascular system | 4.04e-07 | 5 |
blood vasculature | 4.04e-07 | 5 |
vascular cord | 4.04e-07 | 5 |
bone element | 5.77e-07 | 22 |
skeletal element | 5.77e-07 | 22 |
skeletal system | 5.77e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.46e-11 | 3 |
muscle cancer | 1.46e-11 | 3 |