FFCP PHASE1:Mm9::chr1:17257114..17257120,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:17257114..17257120,-
|short_description=p@chr1:17257114..17257120,-
|description=CAGE_peak_at_chr1:17257114..17257120,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=432 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:17257114..17257120,- | |||
|description=CAGE_peak_at_chr1:17257114..17257120,- | |||
|id=chr1:17257114..17257120,- | |||
|ontology_enrichment_celltype=CL:0000540!2.63e-14!33;CL:0000047!2.63e-14!33;CL:0000031!2.63e-14!33;CL:0000404!2.63e-14!33;CL:0000393!1.55e-13!39;CL:0000211!1.55e-13!39;CL:0002319!7.06e-13!43;CL:0000723!1.61e-12!91;CL:0000048!1.61e-12!91;CL:0000221!1.72e-12!44;CL:0000133!1.72e-12!44;CL:0000055!7.89e-12!50;CL:0000034!3.41e-11!97;CL:0000117!1.46e-10!23;CL:0000337!1.46e-10!23;CL:0000548!4.94e-09!115;CL:0000004!4.94e-09!115;CL:0000255!4.94e-09!115;CL:0002371!5.36e-08!118;CL:0002321!1.59e-07!70;CL:0000220!1.59e-07!70;CL:0000144!4.71e-07!121;CL:0000012!4.71e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.85e-19,33;CL:0000047,6.85e-19,33;CL:0000031,6.85e-19,33;CL:0000404,6.85e-19,33;CL:0000393,8.10e-17,39;CL:0000211,8.10e-17,39;CL:0000723,6.50e-16,91;CL:0000048,6.50e-16,91;CL:0000034,1.97e-14,97;CL:0002319,2.55e-13,43;CL:0000221,6.65e-13,44;CL:0000133,6.65e-13,44;CL:0000117,2.56e-11,23;CL:0000337,2.56e-11,23;CL:0002321,3.84e-10,70;CL:0000107,4.45e-10,9;CL:0000050,1.90e-08,9;CL:0002609,2.72e-08,6;CL:0000764,6.90e-08,3;CL:0000765,6.90e-08,3;CL:0000038,6.90e-08,3;CL:0000547,6.90e-08,3;CL:0002027,7.12e-07,3;CL:0002006,7.12e-07,3;CL:0002024,7.12e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.90e-08,3;DOID:0060083,6.90e-08,3;DOID:1240,6.90e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.80e-14!73;UBERON:0005743!5.80e-14!73;UBERON:0000073!2.56e-13!75;UBERON:0001016!2.56e-13!75;UBERON:0002020!5.57e-10!34;UBERON:0001049!1.62e-08!52;UBERON:0005068!1.62e-08!52;UBERON:0006241!1.62e-08!52;UBERON:0007135!1.62e-08!52;UBERON:0000955!1.67e-08!50;UBERON:0006238!1.67e-08!50;UBERON:0002616!1.90e-08!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0004121!6.41e-08!102;UBERON:0000924!6.41e-08!102;UBERON:0006601!6.41e-08!102;UBERON:0002780!1.73e-07!39;UBERON:0001890!1.73e-07!39;UBERON:0006240!1.73e-07!39;UBERON:0000956!3.87e-07!21;UBERON:0001869!3.87e-07!21;UBERON:0000203!3.87e-07!21;UBERON:0002346!6.11e-07!71;UBERON:0003075!6.11e-07!71;UBERON:0007284!6.11e-07!71;UBERON:0003080!6.17e-07!40;UBERON:0000153!6.29e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.09e-15,73;UBERON:0003528,1.41e-14,29;UBERON:0002791,1.41e-14,29;UBERON:0001893,1.41e-14,29;UBERON:0001016,2.35e-14,75;UBERON:0000956,2.88e-14,21;UBERON:0001869,2.88e-14,21;UBERON:0000203,2.88e-14,21;UBERON:0002020,1.54e-13,34;UBERON:0002021,6.97e-13,10;UBERON:0000411,6.97e-13,10;UBERON:0001950,6.97e-13,10;UBERON:0002619,8.40e-13,17;UBERON:0002410,4.45e-10,9;UBERON:0000073,4.95e-10,54;UBERON:0004121,7.15e-10,95;UBERON:0000924,7.15e-10,95;UBERON:0006601,7.15e-10,95;UBERON:0002780,8.27e-10,39;UBERON:0001890,8.27e-10,39;UBERON:0006240,8.27e-10,39;UBERON:0003080,1.82e-09,40;UBERON:0000010,4.86e-08,11;UBERON:0002616,9.88e-08,46;UBERON:0000955,1.73e-07,47;UBERON:0006238,1.73e-07,47;UBERON:0001049,2.09e-07,52;UBERON:0005068,2.09e-07,52;UBERON:0006241,2.09e-07,52;UBERON:0007135,2.09e-07,52;UBERON:0003056,4.97e-07,49;UBERON:0002346,5.56e-07,64;UBERON:0003075,5.56e-07,64;UBERON:0007284,5.56e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0.700837921786577,0.903863264091034,0.140788722151667,1.17032263160997,0.68487187290202,0.398860794976682,0.684802919724823,0.437102012094987,2.6648780945253,1.21485160433896,3.49780939064073,0.473193248037357,0.548457734422955,0.84877930359606,0.17008658030214,0.198581902401771,1.04479915655574,0,0,0,0,0,0,0,0,9.52546010189447,5.53558308826113,15.8481681015439,0,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0,0.183546752161682,0.782391344348039,0.872100625521786,0.219686182734472,0.972149495371417,0.419959264876088,0,0,0.725362142011344,1.00828139742739,0.771778308107841,0.286533439938757,1.03134418455488,0.809265843438391,0.528990979272033,2.53532561402472,0.677689064138264,0,0,0.988866362566974,0.7104801149461,0,0.768436610643109,0.414758449233911,3.24014251996058,2.3135745748652,0.285650984403804,1.76694832761291,1.71487118900936,1.15014565221884,1.83843757322004,1.10115880999389,1.14918604276669,1.22885226604995,1.97829431595291,0.640413505216868,1.56274011167028,0.558365998002762,0.56276261003168,1.06958773443767,0.589257170947335,0.996601765593721,0.931997229126503,0.075726193333184,0.0755715601067855,0.869593466105033,0,1.3599426674155,0,1.29955283489534,4.03224198387602,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0,0.884610551949874,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0.127070227073065,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0.360124259610698,0.452114453507145,0.204109497453984,0.384341160854549,0.281105173679186,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0,0.948339504765408,0.342745537829186,1.1270773567308,0,0.581857461502877,0.0701358198903186,0.189709611372772,0,0.31399745568275,0,0,0,0.589676985339609,0.449724224769707,0.202860121388503,0,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0,0.167506257441816,0,0,0,0.664394068946325,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,0.481651769963376,0.234423373184406,0.163934945376675,0,0.631016438832513,1.95219372148319,1.50796378412959,1.91175038362042,1.33679204449436,1.98153571552183,0.809621403349789,2.33804686329049,1.58115111178609,0.321321316421807,0.283880170416537,0.178065603667255,0,0,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0,0,0.712994756769443,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.214337035031592,0.354680467284547,0,0.329098041204242,0.608929898229199,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0.238744688006273,0,0,0.18542530201051,0.512612642393558,0.206386867963223,0,0.565105371014073,0.136694227721025,0,0,0,0,0,0.790839983952838,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.149516546043979,0.66183396182839,0.388902376688095,0.129159823477731,0,0.469428954583016,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0.649604114888975,0.895133478337407,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.457240839929999,0.403304740547362,0.292373642219257,0.384847366561318,0.233753804363138,0.226730383615211,0.443971906748129,0.986852422704233,0,0,0.187682475451182,0.73260649706906,0.428736758158132,0,1.6942555278512,1.84130094602871,4.01026859407578,2.23409137046794,4.7955776383945,3.0215755895588,4.05013500139084,0.900642406448441,2.26571204492102,0,0.415149390336707,1.19707462020309,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,1.55572709461131,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,1.23625770240992,0,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,2.04615521584845,0,0,0,0,0.214871054048298,0.191288332068843,0,0.463735671240843 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| ||
|short_description=p@chr1:17257114..17257120,- | |||
}} | }} |
Latest revision as of 05:20, 5 August 2015
Short description: | p@chr1:17257114..17257120, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:17257114..17257120, - |
Coexpression cluster: | MCL_coexpression_mm9:432 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.85e-19 | 33 |
neuronal stem cell | 6.85e-19 | 33 |
neuroblast | 6.85e-19 | 33 |
electrically signaling cell | 6.85e-19 | 33 |
electrically responsive cell | 8.10e-17 | 39 |
electrically active cell | 8.10e-17 | 39 |
somatic stem cell | 6.50e-16 | 91 |
multi fate stem cell | 6.50e-16 | 91 |
stem cell | 1.97e-14 | 97 |
neural cell | 2.55e-13 | 43 |
ectodermal cell | 6.65e-13 | 44 |
neurectodermal cell | 6.65e-13 | 44 |
CNS neuron (sensu Vertebrata) | 2.56e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-11 | 23 |
embryonic cell | 3.84e-10 | 70 |
autonomic neuron | 4.45e-10 | 9 |
megakaryocyte-erythroid progenitor cell | 1.90e-08 | 9 |
neuron of cerebral cortex | 2.72e-08 | 6 |
erythroid lineage cell | 6.90e-08 | 3 |
erythroblast | 6.90e-08 | 3 |
erythroid progenitor cell | 6.90e-08 | 3 |
proerythroblast | 6.90e-08 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 7.12e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.12e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.09e-15 | 73 |
brain grey matter | 1.41e-14 | 29 |
regional part of telencephalon | 1.41e-14 | 29 |
telencephalon | 1.41e-14 | 29 |
nervous system | 2.35e-14 | 75 |
cerebral cortex | 2.88e-14 | 21 |
cerebral hemisphere | 2.88e-14 | 21 |
pallium | 2.88e-14 | 21 |
gray matter | 1.54e-13 | 34 |
occipital lobe | 6.97e-13 | 10 |
visual cortex | 6.97e-13 | 10 |
neocortex | 6.97e-13 | 10 |
regional part of cerebral cortex | 8.40e-13 | 17 |
autonomic nervous system | 4.45e-10 | 9 |
regional part of nervous system | 4.95e-10 | 54 |
ectoderm-derived structure | 7.15e-10 | 95 |
ectoderm | 7.15e-10 | 95 |
presumptive ectoderm | 7.15e-10 | 95 |
regional part of forebrain | 8.27e-10 | 39 |
forebrain | 8.27e-10 | 39 |
future forebrain | 8.27e-10 | 39 |
anterior neural tube | 1.82e-09 | 40 |
peripheral nervous system | 4.86e-08 | 11 |
regional part of brain | 9.88e-08 | 46 |
brain | 1.73e-07 | 47 |
future brain | 1.73e-07 | 47 |
neural tube | 2.09e-07 | 52 |
neural rod | 2.09e-07 | 52 |
future spinal cord | 2.09e-07 | 52 |
neural keel | 2.09e-07 | 52 |
pre-chordal neural plate | 4.97e-07 | 49 |
neurectoderm | 5.56e-07 | 64 |
neural plate | 5.56e-07 | 64 |
presumptive neural plate | 5.56e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.90e-08 | 3 |
immune system cancer | 6.90e-08 | 3 |
leukemia | 6.90e-08 | 3 |