FFCP PHASE1:Hg19::chr11:116969131..116969166,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:116969131..116969166,- to FFCP PHASE1:Hg19::chr11:116969131..116969166,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23387 | |EntrezGene=23387 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29165 | |HGNC=29165 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2K2 | |UniProt=Q9Y2K2 | ||
|association_with_transcript=0bp_to_ENST00000375300,ENST00000446921_5end | |||
|cluster_id=chr11:116969131..116969166,- | |||
|coexpression_cluster_id=C3085 | |||
|description=CAGE_peak_1_at_SIK3_5end | |||
|id=chr11:116969131..116969166,- | |||
|ontology_enrichment_celltype=CL:0000738!4.29e-23!140;CL:0002057!1.95e-22!42;CL:0000037!8.06e-20!172;CL:0000566!8.06e-20!172;CL:0002031!9.29e-19!124;CL:0000860!1.91e-18!45;CL:0002032!5.55e-18!165;CL:0000837!5.55e-18!165;CL:0002087!1.41e-17!119;CL:0000988!2.91e-17!182;CL:0000766!1.25e-15!76;CL:0000557!3.40e-13!71;CL:0000839!3.89e-12!70;CL:0000763!6.50e-12!112;CL:0000049!6.50e-12!112;CL:0002009!8.18e-12!65;CL:0002194!5.85e-11!63;CL:0000576!5.85e-11!63;CL:0000040!5.85e-11!63;CL:0000559!5.85e-11!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.84e-18;33!CL:0002057;4.84e-18;33!CL:0000576;5.61e-12;48!CL:0000473;3.42e-11;39!CL:0000234;3.42e-11;39!CL:0000766;1.11e-09;69!CL:0002087;6.16e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-25,136;CL:0000860,1.95e-22,42;CL:0002057,1.95e-22,42;CL:0000037,8.67e-22,168;CL:0002031,4.54e-21,120;CL:0002032,7.03e-20,161;CL:0000837,7.03e-20,161;CL:0002087,7.51e-20,115;CL:0000988,1.40e-19,177;CL:0000766,1.94e-18,72;CL:0000473,2.26e-17,48;CL:0000234,2.26e-17,48;CL:0000557,8.10e-16,67;CL:0000839,1.22e-14,66;CL:0002009,2.15e-14,61;CL:0000763,9.54e-14,108;CL:0000049,9.54e-14,108;CL:0002194,1.83e-13,59;CL:0000576,1.83e-13,59;CL:0000040,1.83e-13,59;CL:0000559,1.83e-13,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.07e-40!115;UBERON:0001049!3.44e-21!57;UBERON:0005068!3.44e-21!57;UBERON:0006241!3.44e-21!57;UBERON:0007135!3.44e-21!57;UBERON:0003080!2.95e-17!42;UBERON:0002780!5.11e-17!41;UBERON:0001890!5.11e-17!41;UBERON:0006240!5.11e-17!41;UBERON:0002616!1.05e-16!59;UBERON:0002390!2.39e-15!102;UBERON:0003061!2.39e-15!102;UBERON:0001893!4.57e-14!34;UBERON:0002020!5.49e-14!34;UBERON:0003528!5.49e-14!34;UBERON:0000955!5.55e-14!69;UBERON:0006238!5.55e-14!69;UBERON:0001017!9.44e-14!82;UBERON:0002791!1.26e-13!33;UBERON:0003075!2.48e-13!86;UBERON:0007284!2.48e-13!86;UBERON:0002346!4.65e-13!90;UBERON:0001869!6.09e-13!32;UBERON:0002193!2.74e-12!112;UBERON:0005743!6.63e-12!86;UBERON:0000073!4.07e-11!94;UBERON:0001016!4.07e-11!94;UBERON:0002371!5.78e-11!80;UBERON:0002619!9.54e-11!22;UBERON:0001474!1.81e-10!86;UBERON:0001950!7.80e-10!20;UBERON:0000956!2.96e-09!25;UBERON:0000203!2.96e-09!25;UBERON:0003056!3.75e-09!61;UBERON:0004765!1.00e-08!101;UBERON:0001434!1.00e-08!101;UBERON:0002405!3.64e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.39e-12;41!UBERON:0001890;1.39e-12;41!UBERON:0001893;4.59e-12;34!UBERON:0003528;7.54e-12;34!UBERON:0002020;7.54e-12;34!UBERON:0002791;8.83e-12;32!UBERON:0001869;1.10e-11;32!UBERON:0000073;1.82e-11;53!UBERON:0002616;1.82e-11;53!UBERON:0007023;3.82e-11;114!UBERON:0002619;9.32e-11;22!UBERON:0001950;7.66e-10;20!UBERON:0000956;3.00e-09;25!UBERON:0000203;3.00e-09;25!UBERON:0001017;2.08e-07;75!UBERON:0000955;4.91e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.65e-39,114;UBERON:0001049,6.14e-21,56;UBERON:0005068,6.14e-21,56;UBERON:0006241,6.14e-21,56;UBERON:0007135,6.14e-21,56;UBERON:0000073,9.71e-20,53;UBERON:0002616,9.71e-20,53;UBERON:0002390,1.22e-17,98;UBERON:0003061,1.22e-17,98;UBERON:0002780,5.11e-17,41;UBERON:0001890,5.11e-17,41;UBERON:0003080,5.11e-17,41;UBERON:0006240,5.11e-17,41;UBERON:0002193,3.69e-14,108;UBERON:0001893,4.57e-14,34;UBERON:0003528,5.49e-14,34;UBERON:0002020,5.49e-14,34;UBERON:0000955,9.89e-14,68;UBERON:0006238,9.89e-14,68;UBERON:0003075,1.38e-13,82;UBERON:0007284,1.38e-13,82;UBERON:0001017,1.67e-13,81;UBERON:0002346,2.77e-13,86;UBERON:0002371,4.19e-13,76;UBERON:0002791,5.19e-13,32;UBERON:0001869,6.09e-13,32;UBERON:0001016,1.57e-12,89;UBERON:0001474,1.89e-12,82;UBERON:0002619,9.54e-11,22;UBERON:0002405,1.02e-10,93;UBERON:0001950,7.80e-10,20;UBERON:0004765,8.08e-10,90;UBERON:0001434,1.01e-09,100;UBERON:0003056,2.14e-09,61;UBERON:0000956,2.96e-09,25;UBERON:0000203,2.96e-09,25;UBERON:0010314,3.52e-09,132;UBERON:0010371,5.57e-09,104 | |||
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| ||
|short_description=p1@SIK3 | |||
}} | }} |
Latest revision as of 20:18, 15 September 2015
Short description: | p1@SIK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIK3_5end |
Coexpression cluster: | C3085_Eosinophils_Neutrophils_optic_granulocyte_CD14_CD8_globus |
Association with transcript: | 0bp_to_ENST00000375300, ENST00000446921_5end |
EntrezGene: | SIK3 |
HGNC: | 29165 |
UniProt: | Q9Y2K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.52e-25 | 136 |
classical monocyte | 1.95e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.95e-22 | 42 |
hematopoietic stem cell | 8.67e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 4.54e-21 | 120 |
hematopoietic oligopotent progenitor cell | 7.03e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.03e-20 | 161 |
nongranular leukocyte | 7.51e-20 | 115 |
hematopoietic cell | 1.40e-19 | 177 |
myeloid leukocyte | 1.94e-18 | 72 |
defensive cell | 2.26e-17 | 48 |
phagocyte | 2.26e-17 | 48 |
granulocyte monocyte progenitor cell | 8.10e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.22e-14 | 66 |
macrophage dendritic cell progenitor | 2.15e-14 | 61 |
myeloid cell | 9.54e-14 | 108 |
common myeloid progenitor | 9.54e-14 | 108 |
monopoietic cell | 1.83e-13 | 59 |
monocyte | 1.83e-13 | 59 |
monoblast | 1.83e-13 | 59 |
promonocyte | 1.83e-13 | 59 |