FFCP PHASE1:Hg19::chr11:65082324..65082344,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:65082324..65082344,+ to FFCP PHASE1:Hg19::chr11:65082324..65082344,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10435 | |EntrezGene=10435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16263 | |HGNC=16263 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001odl.2_5end | |||
|cluster_id=chr11:65082324..65082344,+ | |||
|description=CAGE_peak_2_at_CDC42EP2_5end | |||
|id=chr11:65082324..65082344,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.48e-24!119;CL:0000183!7.90e-20!59;CL:0000187!1.22e-17!54;CL:0000680!5.82e-17!57;CL:0000056!5.82e-17!57;CL:0000355!5.82e-17!57;CL:0000192!7.29e-16!42;CL:0000514!7.29e-16!42;CL:0000393!7.24e-15!60;CL:0000211!7.24e-15!60;CL:0000220!1.65e-12!246;CL:0000359!2.36e-12!32;CL:0002321!4.03e-12!248;CL:0000055!4.61e-12!180;CL:0002078!1.34e-07!44;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57;CL:0000057!5.28e-07!75;CL:1000449!5.83e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.05e-11;32!CL:0000192;1.06e-11;43!CL:0000187;7.38e-10;55!CL:0000860;8.79e-09;33!CL:0002057;8.79e-09;33!CL:0000393;1.00e-07;61!CL:0000211;1.00e-07;61!CL:1000449;7.48e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.80e-25,121;CL:0000187,9.03e-18,55;CL:0000680,4.25e-17,58;CL:0000056,4.25e-17,58;CL:0000355,4.25e-17,58;CL:0000192,5.76e-16,43;CL:0000514,5.76e-16,43;CL:0000393,6.39e-15,61;CL:0000211,6.39e-15,61;CL:0002321,1.31e-12,250;CL:0000359,2.19e-12,32;CL:0002078,3.13e-08,45;CL:0000213,4.78e-08,58;CL:0000215,4.78e-08,58;CL:0000057,1.82e-07,76;CL:1000449,6.18e-07,15;CL:0000115,7.99e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;1.06e-11;43!CL:0000355;4.13e-09;58!CL:0000222;2.72e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!6.96e-23!625;UBERON:0000468!1.00e-22!659;UBERON:0000480!1.85e-22!626;UBERON:0004872!1.85e-21!84;UBERON:0002050!6.17e-21!605;UBERON:0005423!6.17e-21!605;UBERON:0003914!1.22e-20!118;UBERON:0000923!1.56e-20!604;UBERON:0005291!1.56e-20!604;UBERON:0006598!1.56e-20!604;UBERON:0002532!1.56e-20!604;UBERON:0000922!2.47e-20!612;UBERON:0000486!3.42e-20!82;UBERON:0000119!5.34e-20!312;UBERON:0004535!1.07e-19!110;UBERON:0001009!1.45e-19!113;UBERON:0002049!1.51e-19!79;UBERON:0007798!1.51e-19!79;UBERON:0000926!1.70e-19!448;UBERON:0004120!1.70e-19!448;UBERON:0006603!1.70e-19!448;UBERON:0000483!2.64e-19!309;UBERON:0005256!2.83e-19!143;UBERON:0001981!3.85e-19!60;UBERON:0007500!3.85e-19!60;UBERON:0004537!3.85e-19!60;UBERON:0006965!3.85e-19!60;UBERON:0000914!6.24e-19!83;UBERON:0002329!6.24e-19!83;UBERON:0003077!6.24e-19!83;UBERON:0003059!6.24e-19!83;UBERON:0007282!6.24e-19!83;UBERON:0009618!6.24e-19!83;UBERON:0007285!6.24e-19!83;UBERON:0004290!9.97e-19!70;UBERON:0000055!1.86e-18!69;UBERON:0001637!1.43e-16!42;UBERON:0003509!1.43e-16!42;UBERON:0004572!1.43e-16!42;UBERON:0001134!1.60e-16!61;UBERON:0002036!1.60e-16!61;UBERON:0003082!1.60e-16!61;UBERON:0002385!3.09e-16!63;UBERON:0001015!3.09e-16!63;UBERON:0000383!3.09e-16!63;UBERON:0000490!3.22e-15!138;UBERON:0002100!5.78e-15!216;UBERON:0003081!1.23e-14!216;UBERON:0000481!3.14e-13!347;UBERON:0004573!6.21e-13!33;UBERON:0004571!6.21e-13!33;UBERON:0003104!6.58e-13!238;UBERON:0009142!6.58e-13!238;UBERON:0000477!2.63e-11!286;UBERON:0000025!7.66e-11!194;UBERON:0004111!1.76e-10!241;UBERON:0002204!3.88e-10!167;UBERON:0000475!1.39e-09!365;UBERON:0003103!4.95e-09!69;UBERON:0000947!1.87e-07!21;UBERON:0010191!1.87e-07!21;UBERON:0000479!2.75e-07!787;UBERON:0006914!5.21e-07!25;UBERON:0004211!5.83e-07!16;UBERON:0001285!5.83e-07!16;UBERON:0007684!5.83e-07!16;UBERON:0003220!5.83e-07!16;UBERON:0004208!5.83e-07!16;UBERON:0000353!6.62e-07!17;UBERON:0006555!9.28e-07!17;UBERON:0005103!9.28e-07!17;UBERON:0000083!9.28e-07!17;UBERON:0009201!9.28e-07!17;UBERON:0004819!9.28e-07!17;UBERON:0006553!9.28e-07!17;UBERON:0003074!9.28e-07!17;UBERON:0003060!9.28e-07!17;UBERON:0004876!9.94e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.09e-12;42!UBERON:0003509;3.09e-12;42!UBERON:0004572;3.09e-12;42!UBERON:0004573;7.77e-12;33!UBERON:0004571;7.77e-12;33!UBERON:0007500;1.05e-10;56!UBERON:0001981;1.05e-10;56!UBERON:0004537;1.05e-10;56!UBERON:0003914;3.48e-10;74!UBERON:0000055;1.98e-08;65!UBERON:0002049;1.65e-07;75!UBERON:0007798;1.65e-07;75!UBERON:0000025;1.84e-07;93!UBERON:0000947;2.08e-07;21!UBERON:0010191;2.08e-07;21!UBERON:0006914;4.42e-07;25!UBERON:0006555;7.48e-07;15!UBERON:0004819;7.48e-07;15!UBERON:0001285;7.48e-07;15!UBERON:0007684;7.48e-07;15 | |||
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| ||
|short_description=p2@CDC42EP2 | |||
}} | }} |
Latest revision as of 07:18, 19 September 2015
Short description: | p2@CDC42EP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC42EP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001odl.2_5end |
EntrezGene: | CDC42EP2 |
HGNC: | 16263 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.80e-25 | 121 |
muscle cell | 9.03e-18 | 55 |
muscle precursor cell | 4.25e-17 | 58 |
myoblast | 4.25e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.25e-17 | 58 |
smooth muscle cell | 5.76e-16 | 43 |
smooth muscle myoblast | 5.76e-16 | 43 |
electrically responsive cell | 6.39e-15 | 61 |
electrically active cell | 6.39e-15 | 61 |
embryonic cell | 1.31e-12 | 250 |
vascular associated smooth muscle cell | 2.19e-12 | 32 |
meso-epithelial cell | 3.13e-08 | 45 |
lining cell | 4.78e-08 | 58 |
barrier cell | 4.78e-08 | 58 |
fibroblast | 1.82e-07 | 76 |
epithelial cell of nephron | 6.18e-07 | 15 |
endothelial cell | 7.99e-07 | 36 |