FFCP PHASE1:Hg19::chr15:75074839..75074866,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75074839..75074866,+ to FFCP PHASE1:Hg19::chr15:75074839..75074866,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1445 | |EntrezGene=1445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2444 | |HGNC=2444 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQW6 | |UniProt=E7EQW6 | ||
|association_with_transcript=0bp_to_ENST00000451345_5end | |||
|cluster_id=chr15:75074839..75074866,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_CSK_5end | |||
|id=chr15:75074839..75074866,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.66e-58!172;CL:0000566!1.66e-58!172;CL:0000988!3.41e-57!182;CL:0002032!5.90e-55!165;CL:0000837!5.90e-55!165;CL:0000738!9.12e-55!140;CL:0002087!6.49e-46!119;CL:0002031!2.18e-44!124;CL:0000763!5.44e-28!112;CL:0000049!5.44e-28!112;CL:0000542!4.23e-25!53;CL:0000051!4.23e-25!53;CL:0000766!1.17e-24!76;CL:0000838!1.61e-24!52;CL:0000557!5.38e-21!71;CL:0000839!4.75e-19!70;CL:0002009!5.25e-19!65;CL:0002194!1.43e-18!63;CL:0000576!1.43e-18!63;CL:0000040!1.43e-18!63;CL:0000559!1.43e-18!63;CL:0002057!5.07e-17!42;CL:0000860!7.66e-15!45;CL:0000945!2.46e-13!24;CL:0000826!2.46e-13!24;CL:0002320!1.92e-11!365;CL:0000134!1.94e-11!358;CL:0000084!3.05e-11!25;CL:0000827!3.05e-11!25;CL:0000791!5.79e-09!18;CL:0000789!5.79e-09!18;CL:0002420!5.79e-09!18;CL:0002419!5.79e-09!18;CL:0000790!5.79e-09!18;CL:0000219!7.80e-09!390;CL:0000236!9.07e-09!14;CL:0000048!2.63e-08!430;CL:0000115!3.84e-08!35;CL:0000723!6.07e-08!436;CL:0000034!1.23e-07!444;CL:0002393!8.86e-07!9;CL:0002397!8.86e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.32e-16;53!CL:0000945;2.07e-14;24!CL:0002087;2.19e-14;104!CL:0000738;2.00e-13;136!CL:0000576;3.90e-13;48!CL:0000766;6.42e-13;69!CL:0000084;4.99e-12;25!CL:0000473;9.58e-12;39!CL:0000234;9.58e-12;39!CL:0000988;1.35e-11;177!CL:0000860;1.38e-11;33!CL:0002057;1.38e-11;33!CL:0000763;1.35e-10;100!CL:0000791;1.38e-09;18!CL:0000789;1.38e-09;18!CL:0002419;1.38e-09;18!CL:0000236;6.81e-09;13!CL:0000115;2.08e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.19e-66,168;CL:0000988,1.65e-64,177;CL:0000738,1.73e-62,136;CL:0002032,5.94e-62,161;CL:0000837,5.94e-62,161;CL:0002087,6.11e-53,115;CL:0002031,7.53e-51,120;CL:0000763,2.10e-32,108;CL:0000049,2.10e-32,108;CL:0000766,1.16e-29,72;CL:0000542,6.72e-27,53;CL:0000051,6.72e-27,53;CL:0000838,2.83e-26,52;CL:0000557,1.66e-25,67;CL:0002009,2.41e-23,61;CL:0000839,5.12e-23,66;CL:0002194,6.80e-23,59;CL:0000576,6.80e-23,59;CL:0000040,6.80e-23,59;CL:0000559,6.80e-23,59;CL:0000473,5.37e-20,48;CL:0000234,5.37e-20,48;CL:0000860,4.15e-18,42;CL:0002057,4.15e-18,42;CL:0000945,3.12e-14,24;CL:0000826,3.12e-14,24;CL:0000134,1.41e-13,354;CL:0002320,2.59e-13,361;CL:0000084,5.59e-12,25;CL:0000827,5.59e-12,25;CL:0000219,1.91e-10,386;CL:0000791,1.58e-09,18;CL:0000789,1.58e-09,18;CL:0002420,1.58e-09,18;CL:0002419,1.58e-09,18;CL:0000790,1.58e-09,18;CL:0000048,1.59e-09,427;CL:0000236,2.56e-09,14;CL:0000723,5.53e-09,433;CL:0000115,8.07e-09,36;CL:0000034,1.35e-08,441;CL:0002393,3.53e-07,9;CL:0002397,3.53e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000051;7.32e-16;53!CL:0002057;2.63e-13;42!CL:0000790;1.38e-09;18!CL:0000049;1.68e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!1.93e-11!51;DOID:0060083!1.93e-11!51;DOID:1240!3.03e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.07e-07;51!DOID:0060083;2.07e-07;51!DOID:1240;9.29e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.87e-12,51;DOID:0060083,3.87e-12,51;DOID:1240,1.05e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.93e-30!112;UBERON:0002390!3.91e-29!102;UBERON:0003061!3.91e-29!102;UBERON:0002371!3.31e-19!80;UBERON:0002405!1.24e-17!115;UBERON:0001474!8.45e-17!86;UBERON:0003081!3.52e-16!216;UBERON:0004765!7.86e-12!101;UBERON:0001434!7.86e-12!101;UBERON:0002384!4.88e-10!375;UBERON:0000178!2.24e-08!15;UBERON:0000179!2.24e-08!15;UBERON:0000463!2.24e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.90e-09;15!UBERON:0000179;8.90e-09;15!UBERON:0000463;8.90e-09;15!UBERON:0002390;3.18e-08;32!UBERON:0002193;4.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-35,108;UBERON:0002390,9.22e-35,98;UBERON:0003061,9.22e-35,98;UBERON:0002405,1.74e-27,93;UBERON:0002371,1.10e-23,76;UBERON:0001474,8.40e-21,82;UBERON:0003081,1.55e-20,203;UBERON:0004765,1.98e-17,90;UBERON:0001434,7.16e-14,100;UBERON:0002384,5.19e-12,371;UBERON:0000178,6.78e-09,15;UBERON:0000179,6.78e-09,15;UBERON:0000463,6.78e-09,15;UBERON:0000926,2.56e-07,315;UBERON:0004120,2.56e-07,315;UBERON:0006603,2.56e-07,315 | |||
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| ||
|short_description=p4@CSK | |||
}} | }} |
Latest revision as of 01:51, 19 September 2015
Short description: | p4@CSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSK_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000451345_5end |
EntrezGene: | CSK |
HGNC: | 2444 |
UniProt: | E7EQW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-35 | 108 |
hematopoietic system | 9.22e-35 | 98 |
blood island | 9.22e-35 | 98 |
immune system | 1.74e-27 | 93 |
bone marrow | 1.10e-23 | 76 |
bone element | 8.40e-21 | 82 |
lateral plate mesoderm | 1.55e-20 | 203 |
skeletal element | 1.98e-17 | 90 |
skeletal system | 7.16e-14 | 100 |
connective tissue | 5.19e-12 | 371 |
blood | 6.78e-09 | 15 |
haemolymphatic fluid | 6.78e-09 | 15 |
organism substance | 6.78e-09 | 15 |
mesoderm | 2.56e-07 | 315 |
mesoderm-derived structure | 2.56e-07 | 315 |
presumptive mesoderm | 2.56e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.87e-12 | 51 |
immune system cancer | 3.87e-12 | 51 |
leukemia | 1.05e-08 | 39 |