FFCP PHASE1:Hg19::chr16:30907927..30907963,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30907927..30907963,+ to FFCP PHASE1:Hg19::chr16:30907927..30907963,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1489 | |EntrezGene=1489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2499 | |HGNC=2499 | ||
|TSSclassifier=strong | |||
|UniProt=Q16619,Q5U5Y7 | |UniProt=Q16619,Q5U5Y7 | ||
|association_with_transcript=0bp_to_ENST00000279804,ENST00000395019,NM_001142544,NM_001330,uc002dzw.2,uc002dzx.2_5end | |||
|cluster_id=chr16:30907927..30907963,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_CTF1_5end | |||
|id=chr16:30907927..30907963,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.13e-23!180;CL:0000183!1.27e-16!59;CL:0000680!2.26e-15!57;CL:0000056!2.26e-15!57;CL:0000355!2.26e-15!57;CL:0000187!4.69e-15!54;CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000393!1.05e-12!60;CL:0000211!1.05e-12!60;CL:0000057!4.50e-11!75;CL:0000359!4.76e-11!32 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.52e-11;43!CL:0000359;8.49e-11;32!CL:0000187;1.31e-08;55!CL:0000349;9.31e-08;19!CL:0000393;3.27e-07;61!CL:0000211;3.27e-07;61!CL:0000134;5.88e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.08e-16,58;CL:0000056,3.08e-16,58;CL:0000355,3.08e-16,58;CL:0000187,6.56e-16,55;CL:0000192,2.22e-15,43;CL:0000514,2.22e-15,43;CL:0000393,1.47e-12,61;CL:0000211,1.47e-12,61;CL:0000057,1.28e-11,76;CL:0000359,2.19e-11,32;CL:0000349,9.95e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000514;2.52e-11;43!CL:0000355;1.20e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.59e-28!365;UBERON:0000481!2.01e-25!347;UBERON:0000914!8.21e-21!83;UBERON:0002329!8.21e-21!83;UBERON:0003077!8.21e-21!83;UBERON:0003059!8.21e-21!83;UBERON:0007282!8.21e-21!83;UBERON:0009618!8.21e-21!83;UBERON:0007285!8.21e-21!83;UBERON:0000486!1.33e-19!82;UBERON:0005256!6.88e-18!143;UBERON:0004290!7.33e-18!70;UBERON:0000468!1.80e-17!659;UBERON:0002100!2.42e-17!216;UBERON:0002385!9.27e-17!63;UBERON:0001015!9.27e-17!63;UBERON:0000383!9.27e-17!63;UBERON:0001134!1.99e-16!61;UBERON:0002036!1.99e-16!61;UBERON:0003082!1.99e-16!61;UBERON:0000483!4.06e-16!309;UBERON:0000119!7.53e-16!312;UBERON:0003104!2.77e-15!238;UBERON:0009142!2.77e-15!238;UBERON:0000467!1.90e-13!625;UBERON:0000480!3.63e-13!626;UBERON:0000922!5.68e-11!612;UBERON:0002050!6.56e-11!605;UBERON:0005423!6.56e-11!605;UBERON:0000923!1.03e-10!604;UBERON:0005291!1.03e-10!604;UBERON:0006598!1.03e-10!604;UBERON:0002532!1.03e-10!604;UBERON:0003102!3.75e-10!95;UBERON:0000477!3.83e-10!286;UBERON:0004111!2.35e-09!241;UBERON:0000064!2.30e-08!219;UBERON:0003103!3.09e-08!69;UBERON:0000062!7.42e-08!511;UBERON:0004923!1.81e-07!57;UBERON:0004872!3.45e-07!84;UBERON:0000025!4.17e-07!194;UBERON:0001135!8.97e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.29e-08;31!UBERON:0001015;6.29e-08;31!UBERON:0000383;6.29e-08;31!UBERON:0001135;4.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.26e-20,83;UBERON:0007524,3.87e-19,73;UBERON:0002329,8.04e-19,71;UBERON:0003059,8.04e-19,71;UBERON:0007282,8.04e-19,71;UBERON:0004290,8.04e-19,71;UBERON:0009618,8.04e-19,71;UBERON:0003077,8.58e-19,72;UBERON:0007285,8.58e-19,72;UBERON:0007503,8.70e-19,78;UBERON:0003104,1.13e-18,160;UBERON:0009142,1.13e-18,160;UBERON:0002385,1.12e-17,64;UBERON:0001015,1.12e-17,64;UBERON:0000383,1.12e-17,64;UBERON:0001134,2.47e-17,62;UBERON:0002036,2.47e-17,62;UBERON:0003082,2.47e-17,62;UBERON:0000483,1.85e-15,306;UBERON:0000119,3.42e-15,309;UBERON:0002100,1.68e-13,199;UBERON:0005256,6.22e-13,122;UBERON:0003102,7.63e-11,99;UBERON:0005423,4.68e-09,581;UBERON:0010314,1.15e-08,132;UBERON:0000922,1.17e-08,592;UBERON:0003103,2.95e-08,68;UBERON:0004923,5.31e-08,66;UBERON:0004111,1.20e-07,240;UBERON:0002050,1.60e-07,564;UBERON:0000479,3.63e-07,773;UBERON:0000923,4.99e-07,560;UBERON:0010316,4.99e-07,560;UBERON:0005291,4.99e-07,560;UBERON:0006598,4.99e-07,560;UBERON:0010317,4.99e-07,560;UBERON:0002532,4.99e-07,560;UBERON:0004872,5.02e-07,83;UBERON:0000490,5.57e-07,148;UBERON:0001135,5.83e-07,15 | |||
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| ||
|short_description=p1@CTF1 | |||
}} | }} |
Latest revision as of 10:02, 16 September 2015
Short description: | p1@CTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTF1_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000279804, ENST00000395019, NM_001142544, NM_001330, uc002dzw.2, uc002dzx.2_5end |
EntrezGene: | CTF1 |
HGNC: | 2499 |
UniProt: | Q16619Q5U5Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.08e-16 | 58 |
myoblast | 3.08e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.08e-16 | 58 |
muscle cell | 6.56e-16 | 55 |
smooth muscle cell | 2.22e-15 | 43 |
smooth muscle myoblast | 2.22e-15 | 43 |
electrically responsive cell | 1.47e-12 | 61 |
electrically active cell | 1.47e-12 | 61 |
fibroblast | 1.28e-11 | 76 |
vascular associated smooth muscle cell | 2.19e-11 | 32 |
extraembryonic cell | 9.95e-08 | 19 |