FFCP PHASE1:Hg19::chr17:26120743..26120759,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:26120743..26120759,- to FFCP PHASE1:Hg19::chr17:26120743..26120759,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:26120743..26120759,- | |||
|description=CAGE_peak_at_chr17:26120743..26120759,- | |||
|id=chr17:26120743..26120759,- | |||
|ontology_enrichment_celltype=CL:0002322!1.57e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000346;2.70e-09;3!CL:1000428;2.70e-09;3!CL:0002563;2.45e-07;4!CL:0002253;5.22e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,3.32e-09,3;CL:1000428,3.32e-09,3;CL:0002563,3.28e-07,4;CL:0002253,6.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.73e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-23!82;UBERON:0000073!1.65e-23!94;UBERON:0001016!1.65e-23!94;UBERON:0007023!3.74e-23!115;UBERON:0005743!4.87e-23!86;UBERON:0001950!3.56e-21!20;UBERON:0002619!7.46e-21!22;UBERON:0000955!1.25e-19!69;UBERON:0006238!1.25e-19!69;UBERON:0001049!1.70e-19!57;UBERON:0005068!1.70e-19!57;UBERON:0006241!1.70e-19!57;UBERON:0007135!1.70e-19!57;UBERON:0000956!2.14e-19!25;UBERON:0000203!2.14e-19!25;UBERON:0001869!1.54e-18!32;UBERON:0001893!2.29e-18!34;UBERON:0002780!3.03e-18!41;UBERON:0001890!3.03e-18!41;UBERON:0006240!3.03e-18!41;UBERON:0003080!1.32e-17!42;UBERON:0002791!2.90e-17!33;UBERON:0002616!4.49e-17!59;UBERON:0002020!1.38e-16!34;UBERON:0003528!1.38e-16!34;UBERON:0004121!1.91e-13!169;UBERON:0003075!2.02e-13!86;UBERON:0007284!2.02e-13!86;UBERON:0000924!2.10e-13!173;UBERON:0006601!2.10e-13!173;UBERON:0002346!3.58e-13!90;UBERON:0003056!1.92e-11!61;UBERON:0000153!4.90e-10!129;UBERON:0007811!4.90e-10!129;UBERON:0000200!1.73e-09!6;UBERON:0000033!2.82e-09!123;UBERON:0000064!8.78e-09!219;UBERON:0002021!8.72e-08!5;UBERON:0001872!1.60e-07!5;UBERON:0001052!7.87e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.22e-32;20!UBERON:0002619;8.74e-29;22!UBERON:0000956;5.65e-25;25!UBERON:0000203;5.65e-25;25!UBERON:0001869;5.93e-19;32!UBERON:0001893;7.19e-18;34!UBERON:0000200;7.56e-18;6!UBERON:0002791;2.22e-16;32!UBERON:0003528;3.64e-15;34!UBERON:0002020;3.64e-15;34!UBERON:0002780;9.30e-14;41!UBERON:0001890;9.30e-14;41!UBERON:0001052;2.23e-12;4!UBERON:0002021;3.65e-10;5!UBERON:0004907;6.69e-10;5!UBERON:0001870;9.90e-10;3!UBERON:0001872;1.44e-09;5!UBERON:0000412;2.70e-09;3!UBERON:0001992;2.70e-09;3!UBERON:0001017;1.45e-08;75!UBERON:0000073;3.87e-08;53!UBERON:0002616;3.87e-08;53!UBERON:0000922;7.35e-08;49!UBERON:0002702;2.17e-07;2!UBERON:0001242;2.45e-07;4!UBERON:0001262;2.45e-07;4!UBERON:0004786;2.45e-07;4!UBERON:0004808;2.45e-07;4!UBERON:0001277;2.45e-07;4!UBERON:0000160;5.37e-07;17!UBERON:0000955;6.37e-07;68!UBERON:0002771;7.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.82e-32,20;UBERON:0002619,8.22e-29,22;UBERON:0000956,5.35e-25,25;UBERON:0000203,5.35e-25,25;UBERON:0001869,1.85e-21,32;UBERON:0002780,3.74e-20,41;UBERON:0001890,3.74e-20,41;UBERON:0003080,3.74e-20,41;UBERON:0006240,3.74e-20,41;UBERON:0001893,5.61e-20,34;UBERON:0002791,8.27e-19,32;UBERON:0000200,6.50e-18,6;UBERON:0003528,1.69e-17,34;UBERON:0002020,1.69e-17,34;UBERON:0001049,3.34e-15,56;UBERON:0005068,3.34e-15,56;UBERON:0006241,3.34e-15,56;UBERON:0007135,3.34e-15,56;UBERON:0001017,4.89e-15,81;UBERON:0000073,1.42e-14,53;UBERON:0002616,1.42e-14,53;UBERON:0000955,2.69e-14,68;UBERON:0006238,2.69e-14,68;UBERON:0011216,1.40e-13,223;UBERON:0001016,6.08e-13,89;UBERON:0001052,1.91e-12,4;UBERON:0003056,4.48e-12,61;UBERON:0010371,1.42e-10,104;UBERON:0002021,3.46e-10,5;UBERON:0004907,5.92e-10,5;UBERON:0001870,6.47e-10,3;UBERON:0001872,1.08e-09,5;UBERON:0000412,3.32e-09,3;UBERON:0001992,3.32e-09,3;UBERON:0003075,6.82e-09,82;UBERON:0007284,6.82e-09,82;UBERON:0010314,9.16e-09,132;UBERON:0004121,1.37e-08,171;UBERON:0000924,1.37e-08,171;UBERON:0006601,1.37e-08,171;UBERON:0007023,2.62e-08,114;UBERON:0002346,2.87e-08,86;UBERON:0002702,2.05e-07,2;UBERON:0001242,3.28e-07,4;UBERON:0001262,3.28e-07,4;UBERON:0004786,3.28e-07,4;UBERON:0004808,3.28e-07,4;UBERON:0001277,3.28e-07,4;UBERON:0000160,5.34e-07,17;UBERON:0002771,7.04e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.816002764977012,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63717909341522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,0.530119073285941,0.929551542956147,7.3599349060913,3.28017106138317,0.72995471815166,1.56449532329816,1.28648187638577,6.90674606762403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,4.48524337381443,0,1.9067954313447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1521937656963,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.66982576691332,1.99613798001194,0.260427761085233,0,0,0,0,0,1.72371686620732,0,1.56262495439963,0,0,0,0.221158519862449,0,1.31631238292384,0,0,0,0,0.23056390438806,0.359030577639089,1.52106320690811,0.31900115973192,4.1218917030838,0.533034776018635,0,14.4421835883423,0,0,0,0,0,0,0,0,14.5593663576959,1.29833183845255,0,0.0884575645033392,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.751617097072463,0.622129148383483,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.7727022867646,2.34661659281764,0,0,0.999048047910651,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.599037001496973,0,0.223171457441873,1.34366944973453,0,4.65983798109815,0,0,0,0,0,0,0.681017030557878,0.803765742325096,0.962776056180637,0.415440338029185,0,0,1.21499113316049,0,0.86686278029118,4.24882163893485,0,0,0,0,0.662091970365432,0,0,0,0,0,3.94044099596827,0.170388021785422,0.339936274560377,0,0,0.129282956361551,0,0,0,2.77647272676006,5.81655928868764,0.414239055347196,0.992332043623902,0,0,0,0,0.5013797880454,0.306345576763462,0,0,4.43034089983493,1.58634144372552,4.50687350543399,0,0.110929051536852,0.124192805882767,2.07522952404346,0,0.606596470166591,0.285465333544967,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.607719912354764,4.00949464840019,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.215649622793364,0.157265941855896,0,0.678930119816101,0,0,0.558644917973244,0,0,0,0,0,0.770750701157514,4.25089728976755,3.35231104020018,2.66651273512982,0.504143392443436,3.52701987567511,1.29180516505481,0,0,0,0,0,0,0,0.397832444232549,0.376051641746286,0,0,0,0,0,2.4988906308806,1.56215619722769,2.89361515101658,2.91712726891971,0.546974809018219,0,0.496211178389294,0,0,0,0,2.42786241694653,1.13831095675649,1.5966426629275,0,0,0.339848664884159,2.63091094251396,0.472775363535873,0,0.078493092850514,0,24.1034060449859,1.82631744101899,0,0,0.857718530119876,0.790068058663633,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,7.48606283078738,0,2.37840181555137,0,12.8630404592152,1.20770274853339,0.231522474323834,0.874238242015829,0,0,0,0,0,1.6906229103336,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,1.57771562193185,1.35982980381829,1.30905207102113,1.5870805215462,0,0,0,0.126166424835079,0,0.253397002022874,0.305966489225945,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,0,0.20686599172379,0,1.66645102024618,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.808468755832877,2.39488422686657,2.39563310759697,0.740872583160463,1.2192774916755,1.33064142618405,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.816002764977012,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94653948121054,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63717909341522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,0.530119073285941,0.929551542956147,7.3599349060913,3.28017106138317,0.72995471815166,1.56449532329816,1.28648187638577,6.90674606762403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09080345523293,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,4.48524337381443,0,1.9067954313447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1521937656963,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.66982576691332,1.99613798001194,0.260427761085233,0,0,0,0,0,1.72371686620732,0,1.56262495439963,0,0,0,0.221158519862449,0,1.31631238292384,0,0,0,0,0.23056390438806,0.359030577639089,1.52106320690811,0.31900115973192,4.1218917030838,0.533034776018635,0,14.4421835883423,0,0,0,0,0,0,0,0,14.5593663576959,1.29833183845255,0,0.0884575645033392,0,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.751617097072463,0.622129148383483,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.7727022867646,2.34661659281764,0,0,0.999048047910651,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0.599037001496973,0,0.223171457441873,1.34366944973453,0,4.65983798109815,0,0,0,0,0,0,0.681017030557878,0.803765742325096,0.962776056180637,0.415440338029185,0,0,1.21499113316049,0,0.86686278029118,4.24882163893485,0,0,0,0,0.662091970365432,0,0,0,0,0,3.94044099596827,0.170388021785422,0.339936274560377,0,0,0.129282956361551,0,0,0,2.77647272676006,5.81655928868764,0.414239055347196,0.992332043623902,0,0,0,0,0.5013797880454,0.306345576763462,0,0,4.43034089983493,1.58634144372552,4.50687350543399,0,0.110929051536852,0.124192805882767,2.07522952404346,0,0.606596470166591,0.285465333544967,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.607719912354764,4.00949464840019,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.255788742607303,0.215649622793364,0.157265941855896,0,0.678930119816101,0,0,0.558644917973244,0,0,0,0,0,0.770750701157514,4.25089728976755,3.35231104020018,2.66651273512982,0.504143392443436,3.52701987567511,1.29180516505481,0,0,0,0,0,0,0,0.397832444232549,0.376051641746286,0,0,0,0,0,2.4988906308806,1.56215619722769,2.89361515101658,2.91712726891971,0.546974809018219,0,0.496211178389294,0,0,0,0,2.42786241694653,1.13831095675649,1.5966426629275,0,0,0.339848664884159,2.63091094251396,0.472775363535873,0,0.078493092850514,0,24.1034060449859,1.82631744101899,0,0,0.857718530119876,0.790068058663633,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,7.48606283078738,0,2.37840181555137,0,12.8630404592152,1.20770274853339,0.231522474323834,0.874238242015829,0,0,0,0,0,1.6906229103336,0,0.0939839179798536,0.515663103788617,0,0,0,0,0,0,0,1.57771562193185,1.35982980381829,1.30905207102113,1.5870805215462,0,0,0,0.126166424835079,0,0.253397002022874,0.305966489225945,0,0,0.250707539292375,0.0757786982182394,0.535928260312357,0,0.20686599172379,0,1.66645102024618,0.0645889098360061,0.186224142887574,0,0.0636471582781649,0.808468755832877,2.39488422686657,2.39563310759697,0.740872583160463,1.2192774916755,1.33064142618405,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr17:26120743..26120759,- | |||
}} | }} |
Latest revision as of 14:51, 25 July 2015
Short description: | p@chr17:26120743..26120759, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26120743..26120759, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 3.32e-09 | 3 |
stem cell of epidermis | 3.32e-09 | 3 |
intestinal epithelial cell | 3.28e-07 | 4 |
epithelial cell of large intestine | 6.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.73e-07 | 4 |