FFCP PHASE1:Hg19::chr17:47287928..47287943,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:47287928..47287943,- to FFCP PHASE1:Hg19::chr17:47287928..47287943,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2793 | |EntrezGene=2793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4412 | |HGNC=4412 | ||
|TSSclassifier=strong | |||
|UniProt=O14610 | |UniProt=O14610 | ||
|association_with_transcript=0bp_to_ENST00000507680,NM_001198754_5end | |||
|cluster_id=chr17:47287928..47287943,- | |||
|description=CAGE_peak_1_at_GNGT2_5end | |||
|id=chr17:47287928..47287943,- | |||
|ontology_enrichment_celltype=CL:0002087!3.15e-55!119;CL:0000738!1.87e-51!140;CL:0000037!3.47e-48!172;CL:0000566!3.47e-48!172;CL:0002031!2.30e-47!124;CL:0002032!2.04e-45!165;CL:0000837!2.04e-45!165;CL:0000988!2.39e-44!182;CL:0000542!3.83e-26!53;CL:0000051!3.83e-26!53;CL:0002009!4.53e-26!65;CL:0000838!1.37e-25!52;CL:0002194!2.52e-25!63;CL:0000576!2.52e-25!63;CL:0000040!2.52e-25!63;CL:0000559!2.52e-25!63;CL:0002057!1.24e-24!42;CL:0000557!9.07e-22!71;CL:0000860!1.09e-21!45;CL:0000766!2.49e-21!76;CL:0000839!2.11e-20!70;CL:0000763!9.58e-20!112;CL:0000049!9.58e-20!112;CL:0000084!2.18e-12!25;CL:0000827!2.18e-12!25;CL:0000945!3.75e-12!24;CL:0000826!3.75e-12!24;CL:0000791!2.61e-10!18;CL:0000789!2.61e-10!18;CL:0002420!2.61e-10!18;CL:0002419!2.61e-10!18;CL:0000790!2.61e-10!18;CL:0002393!1.47e-08!9;CL:0002397!1.47e-08!9;CL:0000625!8.57e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;5.45e-23;48!CL:0000860;4.20e-22;33!CL:0002057;4.20e-22;33!CL:0000473;4.93e-22;39!CL:0000234;4.93e-22;39!CL:0002087;8.70e-21;104!CL:0000542;1.53e-18;53!CL:0000945;5.65e-16;24!CL:0000738;7.15e-16;136!CL:0000766;3.59e-15;69!CL:0000084;3.90e-13;25!CL:0000791;2.92e-10;18!CL:0000789;2.92e-10;18!CL:0002419;2.92e-10;18!CL:0000988;3.16e-10;177!CL:0000625;7.41e-10;11!CL:0000763;1.99e-09;100!CL:0002393;2.23e-08;6!CL:0002397;2.23e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,8.95e-78,115;CL:0000738,1.77e-72,136;CL:0000037,6.22e-68,168;CL:0002031,5.07e-67,120;CL:0002032,1.66e-64,161;CL:0000837,1.66e-64,161;CL:0000988,1.33e-62,177;CL:0002194,1.52e-39,59;CL:0000576,1.52e-39,59;CL:0000040,1.52e-39,59;CL:0000559,1.52e-39,59;CL:0002009,2.59e-39,61;CL:0000473,2.91e-39,48;CL:0000234,2.91e-39,48;CL:0000860,5.29e-35,42;CL:0002057,5.29e-35,42;CL:0000766,1.78e-34,72;CL:0000557,3.26e-34,67;CL:0000839,1.64e-33,66;CL:0000542,6.38e-32,53;CL:0000051,6.38e-32,53;CL:0000838,4.30e-31,52;CL:0000763,9.83e-31,108;CL:0000049,9.83e-31,108;CL:0000945,5.98e-16,24;CL:0000826,5.98e-16,24;CL:0000134,3.26e-15,354;CL:0002320,2.58e-14,361;CL:0000084,4.60e-13,25;CL:0000827,4.60e-13,25;CL:0002393,2.27e-12,9;CL:0002397,2.27e-12,9;CL:0000219,9.24e-12,386;CL:0000791,4.45e-10,18;CL:0000789,4.45e-10,18;CL:0002420,4.45e-10,18;CL:0002419,4.45e-10,18;CL:0000790,4.45e-10,18;CL:0000625,1.42e-09,11;CL:0000048,9.03e-09,427;CL:0000723,2.91e-08,433;CL:0000034,6.14e-08,441;CL:0000236,6.81e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;8.25e-25;42!CL:0000051;1.53e-18;53!CL:0000790;2.92e-10;18!CL:0000049;1.65e-09;108 | |||
|ontology_enrichment_disease=DOID:0060058!5.82e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.21e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.60e-10,10;DOID:2531,2.80e-08,51;DOID:0060083,2.80e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.99e-29!112;UBERON:0002390!6.21e-27!102;UBERON:0003061!6.21e-27!102;UBERON:0002371!3.40e-18!80;UBERON:0002405!6.08e-18!115;UBERON:0007023!1.20e-15!115;UBERON:0001474!2.57e-15!86;UBERON:0004765!3.95e-11!101;UBERON:0001434!3.95e-11!101;UBERON:0003081!2.45e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.10e-07;15!UBERON:0000179;1.10e-07;15!UBERON:0000463;1.10e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-41,98;UBERON:0003061,1.41e-41,98;UBERON:0002193,1.78e-41,108;UBERON:0002405,3.10e-34,93;UBERON:0002371,4.15e-28,76;UBERON:0001474,8.27e-25,82;UBERON:0004765,3.97e-21,90;UBERON:0001434,2.08e-17,100;UBERON:0003081,1.02e-14,203;UBERON:0002384,4.20e-13,371;UBERON:0004177,2.01e-08,7;UBERON:0005057,2.01e-08,7;UBERON:0000178,8.48e-08,15;UBERON:0000179,8.48e-08,15;UBERON:0000463,8.48e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2393963702255,11.0835795757427,8.97302906975943,6.68719270643137,6.1412703695554,3.71558695958582,0,0,0,13.4792929009725,4.97592313705975,0.587200878669695,3.87796785972314,2.00544447470142,3.68918480216948,9.1805344438369,5.50619232232265,6.95454032612304,2.61716829803216,4.53451132426571,2.91100873425379,2.09186133215116,2.05583944010913,2.78735733805593,1.7261543539329,4.86705342405291,2.36482229888585,1.03423704220986,1.29096936716765,0,2.44715041405386,1.63743690034707,4.71919317334678,2.14258724659632,1.92557416245656,1.91801137739712,3.62836430205388,5.58498241340569,5.54092175692502,1.7412554317715,0.56738522469114,2.4912889959823,4.01997864410789,3.65038042894141,2.38907729175628,1.21079900526674,1.10483290796269,0.316462387440884,11.4077854608449,9.99240209835705,9.43463904787692,3.70684482783434,3.15371474967163,2.4108838004562,19.9508920618874,15.1176674671308,15.8917813775232,0,1.09227722252426,1.77901850772711,1.70692089026603,2.00197993518006,1.14950487990897,0.661044872784862,0,1.1384259382189,1.17447437874188,1.14681968437569,0,1.12101712596307,0,0.786839080455332,2.75107533924415,0.616804496998528,2.17342444007882,1.62961133316795,0.473447805734733,0,3.45372416344038,0.294605907474837,0.221533894583621,1.08321545506006,2.17755243533648,3.25148368899696,3.78207180588455,3.86890024900188,2.02862160014537,1.18629250529648,0.802622484269139,1.04535523804977,3.39928028092699,1.14966148080576,1.03088233644789,0.253019692019503,4.14135038621326,3.25541726928209,0.950452044448374,3.312652619711,4.60751800155906,1.24930726552346,5.20909954496837,5.74789597844733,1.00803371612366,2.40696176205157,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,3.57002133020152,3.65672448328461,1.99436940778298,0.953962497221368,1.14398982156026,1.11437250398869,0.39752481473341,0.860234595106124,1.38856200643038,1.13061588384802,2.51699661725944,0,0.626984899610432,0.516833518338658,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.535798369704479,0.22452937262617,0.563057402416611,0,0,1.64881569537367,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.397589304964456,0,0.310983165046111,0.504641701751257,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.87676382089396,2.77791307545966,0.570762456703795,0,0,3.69325509131096,0.234004265139238,2.22946743433092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.01805673145701,4.21667878966063,0,0,0,0,0,0,7.62178979155985,4.13764596424047,6.253199670926,6.67383788654692,0,0,0,0.335032530668698,0,0,0,0.414415513436035,0.24538298343828,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0.553107505625109,0,0.587403472388222,0,3.3082884179662,3.8828556147351,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,1.13733384070897,1.87103075804167,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0,0,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,3.55213326462519,3.0585488285695,2.27858874869665,2.62054953003568,1.64544909234478,0.648473311192717,1.62009431171434,1.58625035258854,0,0,0,2.04383492638291,2.74111504655245,0.0711418433484141,1.4348364545594,0.798317485731266,4.40462351304443,2.96343015813436,0,0.280797178113459,2.9670508274315,0.156679895773023,2.50634477090067,2.03150133361924,1.76646882614069,1.81619736471943,1.70338495076131,2.06103206853459,0,0,0,1.36771666781428,0,0,0,0,0,0,0.293016358543788,0,2.67464122265948,0,0,0,0,0,1.68803299692615,0,10.8770556989661,0,0.996239941255349,4.69682656402951,0,0,6.64657949489775,0,0,0,1.02314474045374,0.493217028184668,9.57932369387759,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,1.4471572635049,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,1.06606955203727,8.17546385565892,0.156980256395025,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.530745387020035,1.22206028986725,0,0,0,0.808813595768125,0,1.1713222286267,1.82454789215666,0,0,0,1.20990716048664,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0,0,0.19871461170299,0.379864775735272,0,0.160317640503067,0.85381197895741,0,0,0,0,0,0.49701014226173,0,0,0,0,0,1.20084057741958,1.9166753044879,0,0,0,0.279282401272254,0,2.1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| ||
|short_description=p1@GNGT2 | |||
}} | }} |
Latest revision as of 20:11, 15 September 2015
Short description: | p1@GNGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNGT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000507680, NM_001198754_5end |
EntrezGene: | GNGT2 |
HGNC: | 4412 |
UniProt: | O14610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-41 | 98 |
blood island | 1.41e-41 | 98 |
hemolymphoid system | 1.78e-41 | 108 |
immune system | 3.10e-34 | 93 |
bone marrow | 4.15e-28 | 76 |
bone element | 8.27e-25 | 82 |
skeletal element | 3.97e-21 | 90 |
skeletal system | 2.08e-17 | 100 |
lateral plate mesoderm | 1.02e-14 | 203 |
connective tissue | 4.20e-13 | 371 |
hemopoietic organ | 2.01e-08 | 7 |
immune organ | 2.01e-08 | 7 |
blood | 8.48e-08 | 15 |
haemolymphatic fluid | 8.48e-08 | 15 |
organism substance | 8.48e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.60e-10 | 10 |
hematologic cancer | 2.80e-08 | 51 |
immune system cancer | 2.80e-08 | 51 |