FFCP PHASE1:Hg19::chr19:58427951..58427984,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:58427951..58427984,- to FFCP PHASE1:Hg19::chr19:58427951..58427984,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147687 | |EntrezGene=147687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20646 | |HGNC=20646 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAU3 | |UniProt=Q8TAU3 | ||
|association_with_transcript=0bp_to_ENST00000312026,NM_152475,uc002qqq.2,uc002qqr.2,uc010yhm.1_5end | |||
|cluster_id=chr19:58427951..58427984,- | |||
|description=CAGE_peak_1_at_ZNF417_5end | |||
|id=chr19:58427951..58427984,- | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-18!172;CL:0000566!1.12e-18!172;CL:0002032!3.05e-18!165;CL:0000837!3.05e-18!165;CL:0000738!2.81e-17!140;CL:0000988!5.62e-16!182;CL:0002031!1.07e-14!124;CL:0000763!1.20e-13!112;CL:0000049!1.20e-13!112;CL:0002087!1.61e-12!119;CL:0000766!3.09e-12!76;CL:0000557!1.25e-10!71;CL:0000839!4.85e-10!70;CL:0002057!8.08e-10!42;CL:0002009!3.29e-09!65;CL:0000860!6.68e-09!45;CL:0002194!1.46e-08!63;CL:0000576!1.46e-08!63;CL:0000040!1.46e-08!63;CL:0000559!1.46e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-10;33!CL:0002057;2.44e-10;33!CL:0000473;8.34e-08;39!CL:0000234;8.34e-08;39!CL:0000576;2.22e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.33e-19,168;CL:0002032,3.51e-19,161;CL:0000837,3.51e-19,161;CL:0000738,2.69e-18,136;CL:0000988,2.54e-17,177;CL:0002031,1.11e-15,120;CL:0000763,1.20e-14,108;CL:0000049,1.20e-14,108;CL:0000766,1.81e-13,72;CL:0002087,2.02e-13,115;CL:0000557,8.60e-12,67;CL:0000839,3.68e-11,66;CL:0002009,2.58e-10,61;CL:0000860,8.08e-10,42;CL:0002057,8.08e-10,42;CL:0002194,1.25e-09,59;CL:0000576,1.25e-09,59;CL:0000040,1.25e-09,59;CL:0000559,1.25e-09,59;CL:0000473,4.69e-09,48;CL:0000234,4.69e-09,48 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-20!115;UBERON:0001017!1.73e-13!82;UBERON:0005743!5.08e-13!86;UBERON:0002616!5.17e-13!59;UBERON:0001049!1.20e-12!57;UBERON:0005068!1.20e-12!57;UBERON:0006241!1.20e-12!57;UBERON:0007135!1.20e-12!57;UBERON:0000955!1.43e-12!69;UBERON:0006238!1.43e-12!69;UBERON:0003080!1.18e-11!42;UBERON:0002780!1.31e-11!41;UBERON:0001890!1.31e-11!41;UBERON:0006240!1.31e-11!41;UBERON:0000073!3.01e-11!94;UBERON:0001016!3.01e-11!94;UBERON:0002390!1.29e-09!102;UBERON:0003061!1.29e-09!102;UBERON:0002193!8.02e-09!112;UBERON:0001893!1.01e-08!34;UBERON:0002791!1.01e-08!33;UBERON:0002020!1.24e-08!34;UBERON:0003528!1.24e-08!34;UBERON:0001869!5.72e-08!32;UBERON:0001474!1.20e-07!86;UBERON:0002371!1.47e-07!80;UBERON:0000956!3.28e-07!25;UBERON:0000203!3.28e-07!25;UBERON:0002619!3.31e-07!22;UBERON:0003075!4.13e-07!86;UBERON:0007284!4.13e-07!86;UBERON:0001950!9.36e-07!20;UBERON:0002346!9.96e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.72e-09;41!UBERON:0001890;9.72e-09;41!UBERON:0000073;3.64e-08;53!UBERON:0002616;3.64e-08;53!UBERON:0002791;1.77e-07;32!UBERON:0001893;2.30e-07;34!UBERON:0003528;2.72e-07;34!UBERON:0002020;2.72e-07;34!UBERON:0001869;4.01e-07;32!UBERON:0002619;5.14e-07;22!UBERON:0000956;5.80e-07;25!UBERON:0000203;5.80e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.65e-20,114;UBERON:0001017,2.11e-13,81;UBERON:0001049,1.40e-12,56;UBERON:0005068,1.40e-12,56;UBERON:0006241,1.40e-12,56;UBERON:0007135,1.40e-12,56;UBERON:0000073,1.41e-12,53;UBERON:0002616,1.41e-12,53;UBERON:0000955,1.71e-12,68;UBERON:0006238,1.71e-12,68;UBERON:0002780,1.31e-11,41;UBERON:0001890,1.31e-11,41;UBERON:0003080,1.31e-11,41;UBERON:0006240,1.31e-11,41;UBERON:0001016,1.66e-11,89;UBERON:0002390,1.94e-10,98;UBERON:0003061,1.94e-10,98;UBERON:0002193,1.53e-09,108;UBERON:0001893,1.01e-08,34;UBERON:0003528,1.24e-08,34;UBERON:0002020,1.24e-08,34;UBERON:0001474,2.01e-08,82;UBERON:0002371,2.27e-08,76;UBERON:0002791,2.29e-08,32;UBERON:0002405,2.62e-08,93;UBERON:0001869,5.72e-08,32;UBERON:0000956,3.28e-07,25;UBERON:0000203,3.28e-07,25;UBERON:0002619,3.31e-07,22;UBERON:0003075,8.10e-07,82;UBERON:0007284,8.10e-07,82;UBERON:0001950,9.36e-07,20 | |||
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| ||
|short_description=p1@ZNF417 | |||
}} | }} |
Latest revision as of 06:34, 20 September 2015
Short description: | p1@ZNF417 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF417_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312026, NM_152475, uc002qqq.2, uc002qqr.2, uc010yhm.1_5end |
EntrezGene: | ZNF417 |
HGNC: | 20646 |
UniProt: | Q8TAU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.33e-19 | 168 |
hematopoietic oligopotent progenitor cell | 3.51e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-19 | 161 |
leukocyte | 2.69e-18 | 136 |
hematopoietic cell | 2.54e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.11e-15 | 120 |
myeloid cell | 1.20e-14 | 108 |
common myeloid progenitor | 1.20e-14 | 108 |
myeloid leukocyte | 1.81e-13 | 72 |
nongranular leukocyte | 2.02e-13 | 115 |
granulocyte monocyte progenitor cell | 8.60e-12 | 67 |
myeloid lineage restricted progenitor cell | 3.68e-11 | 66 |
macrophage dendritic cell progenitor | 2.58e-10 | 61 |
classical monocyte | 8.08e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.08e-10 | 42 |
monopoietic cell | 1.25e-09 | 59 |
monocyte | 1.25e-09 | 59 |
monoblast | 1.25e-09 | 59 |
promonocyte | 1.25e-09 | 59 |
defensive cell | 4.69e-09 | 48 |
phagocyte | 4.69e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.65e-20 | 114 |
central nervous system | 2.11e-13 | 81 |
neural tube | 1.40e-12 | 56 |
neural rod | 1.40e-12 | 56 |
future spinal cord | 1.40e-12 | 56 |
neural keel | 1.40e-12 | 56 |
regional part of nervous system | 1.41e-12 | 53 |
regional part of brain | 1.41e-12 | 53 |
brain | 1.71e-12 | 68 |
future brain | 1.71e-12 | 68 |
regional part of forebrain | 1.31e-11 | 41 |
forebrain | 1.31e-11 | 41 |
anterior neural tube | 1.31e-11 | 41 |
future forebrain | 1.31e-11 | 41 |
nervous system | 1.66e-11 | 89 |
hematopoietic system | 1.94e-10 | 98 |
blood island | 1.94e-10 | 98 |
hemolymphoid system | 1.53e-09 | 108 |
telencephalon | 1.01e-08 | 34 |
brain grey matter | 1.24e-08 | 34 |
gray matter | 1.24e-08 | 34 |
bone element | 2.01e-08 | 82 |
bone marrow | 2.27e-08 | 76 |
regional part of telencephalon | 2.29e-08 | 32 |
immune system | 2.62e-08 | 93 |
cerebral hemisphere | 5.72e-08 | 32 |
cerebral cortex | 3.28e-07 | 25 |
pallium | 3.28e-07 | 25 |
regional part of cerebral cortex | 3.31e-07 | 22 |
neural plate | 8.10e-07 | 82 |
presumptive neural plate | 8.10e-07 | 82 |
neocortex | 9.36e-07 | 20 |