FFCP PHASE1:Hg19::chr1:159166772..159166798,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:159166772..159166798,+ to FFCP PHASE1:Hg19::chr1:159166772..159166798,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57863 | |EntrezGene=57863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17601 | |HGNC=17601 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=140bp_to_ENST00000497636_5end | |||
|cluster_id=chr1:159166772..159166798,+ | |||
|description=CAGE_peak_2_at_CADM3_5end | |||
|id=chr1:159166772..159166798,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002616;2.61e-08;1!CL:0002581;6.85e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.71e-08,1;CL:0002581,5.40e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.99e-10;3!UBERON:0006222;6.85e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;2.11e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.19e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.80e-46!82;UBERON:0005743!4.35e-45!86;UBERON:0001049!4.57e-44!57;UBERON:0005068!4.57e-44!57;UBERON:0006241!4.57e-44!57;UBERON:0007135!4.57e-44!57;UBERON:0000073!2.72e-39!94;UBERON:0001016!2.72e-39!94;UBERON:0000955!1.69e-37!69;UBERON:0006238!1.69e-37!69;UBERON:0002616!1.64e-35!59;UBERON:0002020!1.75e-32!34;UBERON:0003528!1.75e-32!34;UBERON:0003075!1.93e-32!86;UBERON:0007284!1.93e-32!86;UBERON:0001893!3.26e-32!34;UBERON:0002791!7.85e-31!33;UBERON:0002346!2.34e-30!90;UBERON:0007023!3.78e-30!115;UBERON:0001869!4.21e-30!32;UBERON:0002780!1.46e-29!41;UBERON:0001890!1.46e-29!41;UBERON:0006240!1.46e-29!41;UBERON:0003080!1.20e-28!42;UBERON:0002619!6.42e-27!22;UBERON:0000956!2.58e-25!25;UBERON:0000203!2.58e-25!25;UBERON:0000033!2.61e-25!123;UBERON:0001950!5.86e-24!20;UBERON:0004121!7.28e-24!169;UBERON:0000153!2.04e-23!129;UBERON:0007811!2.04e-23!129;UBERON:0000924!6.67e-23!173;UBERON:0006601!6.67e-23!173;UBERON:0003056!1.05e-22!61;UBERON:0000025!6.25e-20!194;UBERON:0004111!7.69e-18!241;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0000477!4.30e-14!286;UBERON:0000483!1.23e-12!309;UBERON:0004733!1.57e-12!12;UBERON:0002028!1.57e-12!12;UBERON:0007277!1.57e-12!12;UBERON:0000119!2.51e-12!312;UBERON:0001871!2.18e-11!7;UBERON:0004732!2.21e-11!13;UBERON:0000200!8.31e-11!6;UBERON:0000349!2.25e-09!5;UBERON:0000481!3.55e-09!347;UBERON:0002420!3.92e-09!9;UBERON:0007245!3.92e-09!9;UBERON:0010009!3.92e-09!9;UBERON:0010011!3.92e-09!9;UBERON:0000454!3.92e-09!9;UBERON:0002680!6.45e-09!9;UBERON:0001895!6.45e-09!9;UBERON:0010092!6.45e-09!9;UBERON:0000475!7.30e-09!365;UBERON:0002298!8.35e-09!8;UBERON:0002308!1.40e-08!9;UBERON:0000125!1.40e-08!9;UBERON:0000922!1.42e-08!612;UBERON:0000923!1.59e-08!604;UBERON:0005291!1.59e-08!604;UBERON:0006598!1.59e-08!604;UBERON:0002532!1.59e-08!604;UBERON:0002050!1.82e-08!605;UBERON:0005423!1.82e-08!605;UBERON:0000369!1.15e-07!4;UBERON:0002435!1.15e-07!4;UBERON:0000204!1.15e-07!4;UBERON:0010082!1.15e-07!4;UBERON:0000467!2.58e-07!625;UBERON:0000480!2.92e-07!626;UBERON:0000064!5.96e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.68e-14;2!UBERON:0001950;3.85e-11;20!UBERON:0002619;3.99e-10;22!UBERON:0001871;1.28e-09;6!UBERON:0000956;6.79e-09;25!UBERON:0000203;6.79e-09;25!UBERON:0002791;8.92e-09;32!UBERON:0001017;1.08e-08;75!UBERON:0001869;3.22e-08;32!UBERON:0001893;3.82e-08;34!UBERON:0001874;6.85e-08;1!UBERON:0001282;6.85e-08;1!UBERON:0009842;6.85e-08;1!UBERON:0003704;6.85e-08;1!UBERON:0001171;6.85e-08;1!UBERON:0001172;6.85e-08;1!UBERON:0003528;7.21e-08;34!UBERON:0002020;7.21e-08;34!UBERON:0000955;1.38e-07;68!UBERON:0000073;2.66e-07;53!UBERON:0002616;2.66e-07;53!UBERON:0001016;9.53e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.98e-15,81;UBERON:0005406,1.37e-14,2;UBERON:0001016,1.80e-13,89;UBERON:0001049,2.11e-12,56;UBERON:0005068,2.11e-12,56;UBERON:0006241,2.11e-12,56;UBERON:0007135,2.11e-12,56;UBERON:0001950,3.39e-11,20;UBERON:0000073,7.66e-11,53;UBERON:0002616,7.66e-11,53;UBERON:0002619,3.55e-10,22;UBERON:0000955,8.87e-10,68;UBERON:0006238,8.87e-10,68;UBERON:0001871,1.23e-09,6;UBERON:0003075,1.75e-09,82;UBERON:0007284,1.75e-09,82;UBERON:0002791,2.78e-09,32;UBERON:0001869,2.78e-09,32;UBERON:0002780,3.46e-09,41;UBERON:0001890,3.46e-09,41;UBERON:0003080,3.46e-09,41;UBERON:0006240,3.46e-09,41;UBERON:0002346,6.03e-09,86;UBERON:0000956,6.14e-09,25;UBERON:0000203,6.14e-09,25;UBERON:0004121,6.33e-09,171;UBERON:0000924,6.33e-09,171;UBERON:0006601,6.33e-09,171;UBERON:0003528,1.06e-08,34;UBERON:0002020,1.06e-08,34;UBERON:0001893,1.06e-08,34;UBERON:0010371,2.33e-08,104;UBERON:0001874,4.11e-08,1;UBERON:0001282,9.29e-08,1;UBERON:0009842,9.29e-08,1;UBERON:0003704,9.29e-08,1;UBERON:0001171,9.29e-08,1;UBERON:0001172,9.29e-08,1;UBERON:0003056,2.16e-07,61;UBERON:0011216,6.31e-07,223 | |||
|phase1_expression=0,0,0,0,0,3.48935409640147,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,1.67799774483962,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,4.0507097394088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,1.50719688529793,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,0.984685914873589,0,0,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,2.32216445855572,2.36438095162838,1.09692698576986,0,0,0.0769502585037971,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,3.97894590119637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.379864775735272,0,0,0.213452994739353,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,5.61320818549031,1.001527445652,0.573409195690071,0.332787154610557,0.0620964029413835,0.968440444553616,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,1.14241563650639,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.615349092722265,1.76450187355203,0.484100767249525,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,4.09429793775242,0,0.472763092328763,0,0.620060389503552,0.126831620387814,1.64092442705466,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.203909198930495,0.460409414939944,0,0,0,1.72827148907602,0,0.913158720509496,0,0,0.0714765441766563,0.316027223465453,0,0,0,0.414432328326074,4.95083583572455,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,2.113278637917,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.815897882290976,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,3.48935409640147,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.940364164434263,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,1.67799774483962,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,4.0507097394088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,1.50719688529793,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,0.984685914873589,0,0,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,5.81599647657131,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,2.32216445855572,2.36438095162838,1.09692698576986,0,0,0.0769502585037971,1.25336261431701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,1.40558667435203,0,0,0,0,0,3.97894590119637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.379864775735272,0,0,0.213452994739353,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.546746009922222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,5.61320818549031,1.001527445652,0.573409195690071,0.332787154610557,0.0620964029413835,0.968440444553616,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,1.14241563650639,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.615349092722265,1.76450187355203,0.484100767249525,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,4.09429793775242,0,0.472763092328763,0,0.620060389503552,0.126831620387814,1.64092442705466,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.203909198930495,0.460409414939944,0,0,0,1.72827148907602,0,0.913158720509496,0,0,0.0714765441766563,0.316027223465453,0,0,0,0.414432328326074,4.95083583572455,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,2.113278637917,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.815897882290976,2.61810414204226,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0 | ||
|short_description=p2@CADM3 | |||
}} | }} |
Latest revision as of 22:27, 17 September 2015
Short description: | p2@CADM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CADM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 140bp_to_ENST00000497636_5end |
EntrezGene: | CADM3 |
HGNC: | 17601 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.71e-08 | 1 |
perirenal preadipocyte | 5.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.19e-08 | 1 |