FFCP PHASE1:Hg19::chr1:22216505..22216565,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:22216505..22216565,- to FFCP PHASE1:Hg19::chr1:22216505..22216565,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:22216505..22216565,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22216505..22216565,- | |||
|id=chr1:22216505..22216565,- | |||
|ontology_enrichment_celltype=CL:0000222!1.55e-22!119;CL:0002139!1.02e-17!24;CL:0000115!5.38e-17!35;CL:0002078!5.46e-17!44;CL:0000220!5.04e-16!246;CL:0000213!5.65e-16!57;CL:0000215!5.65e-16!57;CL:0002321!1.07e-15!248;CL:0000055!6.69e-15!180;CL:0000071!5.73e-14!18;CL:0002546!5.73e-14!18;CL:0000057!5.71e-09!75;CL:0000183!5.96e-09!59;CL:0000359!2.89e-08!32;CL:0000680!3.14e-08!57;CL:0000056!3.14e-08!57;CL:0000355!3.14e-08!57;CL:1000413!6.31e-08!9;CL:0000192!1.64e-07!42;CL:0000514!1.64e-07!42;CL:0000187!2.26e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.38e-30;24!CL:0000115;3.47e-26;36!CL:0000071;1.59e-23;18!CL:0002078;4.24e-20;45!CL:0000213;1.28e-14;58!CL:0000215;1.28e-14;58!CL:1000413;7.65e-13;9!CL:0000359;2.74e-10;32!CL:0002544;3.01e-09;6!CL:0002543;1.15e-08;6!CL:1000746;2.81e-08;7!CL:1000612;2.81e-08;7!CL:0002138;4.15e-08;6!CL:0002188;4.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.48e-31,36;CL:0002139,4.73e-30,24;CL:0002078,2.21e-29,45;CL:0000222,1.79e-26,121;CL:0000213,9.06e-24,58;CL:0000215,9.06e-24,58;CL:0000071,2.02e-23,18;CL:0002546,2.02e-23,18;CL:1000413,8.97e-13,9;CL:0000359,1.34e-10,32;CL:0002321,1.57e-10,250;CL:0002544,3.08e-09,6;CL:0002543,1.10e-08,6;CL:1000746,3.20e-08,7;CL:1000612,3.20e-08,7;CL:0005020,3.55e-08,6;CL:0002138,3.55e-08,6;CL:0005022,3.55e-08,6;CL:0000057,9.86e-08,76;CL:0002188,3.88e-07,5;CL:0000192,4.17e-07,43;CL:0000514,4.17e-07,43;CL:0000076,9.89e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.59e-23;18!CL:0000222;2.30e-08;121!CL:0005022;4.15e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.74e-28!69;UBERON:0002049!4.22e-27!79;UBERON:0007798!4.22e-27!79;UBERON:0004872!2.79e-26!84;UBERON:0001981!2.44e-25!60;UBERON:0007500!2.44e-25!60;UBERON:0004537!2.44e-25!60;UBERON:0006965!2.44e-25!60;UBERON:0003914!1.21e-22!118;UBERON:0001009!4.14e-20!113;UBERON:0004535!1.98e-19!110;UBERON:0001637!1.82e-16!42;UBERON:0003509!1.82e-16!42;UBERON:0004572!1.82e-16!42;UBERON:0000490!2.51e-16!138;UBERON:0001986!5.73e-14!18;UBERON:0004638!5.73e-14!18;UBERON:0004852!5.73e-14!18;UBERON:0002100!3.40e-13!216;UBERON:0006914!7.82e-13!25;UBERON:0004573!1.05e-12!33;UBERON:0004571!1.05e-12!33;UBERON:0000487!1.05e-12!22;UBERON:0004111!1.69e-12!241;UBERON:0000477!4.47e-12!286;UBERON:0005256!8.86e-12!143;UBERON:0000468!3.66e-11!659;UBERON:0000483!7.31e-11!309;UBERON:0000119!1.99e-10!312;UBERON:0002385!1.21e-09!63;UBERON:0001015!1.21e-09!63;UBERON:0000383!1.21e-09!63;UBERON:0000467!1.68e-09!625;UBERON:0001134!2.36e-09!61;UBERON:0002036!2.36e-09!61;UBERON:0003082!2.36e-09!61;UBERON:0000480!2.50e-09!626;UBERON:0003104!2.88e-09!238;UBERON:0009142!2.88e-09!238;UBERON:0000926!6.09e-09!448;UBERON:0004120!6.09e-09!448;UBERON:0006603!6.09e-09!448;UBERON:0000947!2.71e-08!21;UBERON:0010191!2.71e-08!21;UBERON:0004290!3.07e-08!70;UBERON:0000486!5.91e-08!82;UBERON:0003915!6.31e-08!9;UBERON:0004700!6.31e-08!9;UBERON:0001917!6.31e-08!9;UBERON:0000025!7.96e-08!194;UBERON:0003103!8.45e-08!69;UBERON:0009569!1.08e-07!113;UBERON:0000914!1.37e-07!83;UBERON:0002329!1.37e-07!83;UBERON:0003077!1.37e-07!83;UBERON:0003059!1.37e-07!83;UBERON:0007282!1.37e-07!83;UBERON:0009618!1.37e-07!83;UBERON:0007285!1.37e-07!83;UBERON:0000475!2.23e-07!365;UBERON:0003064!4.68e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.59e-23;18!UBERON:0001986;1.59e-23;18!UBERON:0004852;1.59e-23;18!UBERON:0000055;7.45e-23;65!UBERON:0001637;1.06e-21;42!UBERON:0003509;1.06e-21;42!UBERON:0004572;1.06e-21;42!UBERON:0006914;3.09e-21;25!UBERON:0000487;2.48e-20;22!UBERON:0004573;8.97e-20;33!UBERON:0004571;8.97e-20;33!UBERON:0007500;1.05e-19;56!UBERON:0001981;1.05e-19;56!UBERON:0004537;1.05e-19;56!UBERON:0003914;1.19e-15;74!UBERON:0002049;3.65e-15;75!UBERON:0007798;3.65e-15;75!UBERON:0000947;5.89e-14;21!UBERON:0010191;5.89e-14;21!UBERON:0003915;7.65e-13;9!UBERON:0004700;7.65e-13;9!UBERON:0001917;7.65e-13;9!UBERON:0000490;9.63e-13;33!UBERON:0000025;8.73e-11;93!UBERON:0004535;1.38e-09;109!UBERON:0003513;4.55e-09;7!UBERON:0000074;2.81e-08;7!UBERON:0001229;2.81e-08;7!UBERON:0001009;2.81e-08;112!UBERON:0001473;1.17e-07;8!UBERON:0004536;1.17e-07;8!UBERON:0006558;1.17e-07;8!UBERON:0004457;5.79e-07;9!UBERON:0000042;5.79e-07;9!UBERON:0000353;7.72e-07;15!UBERON:0001638;8.57e-07;9!UBERON:0003920;8.57e-07;9!UBERON:0004582;8.57e-07;9 | |||
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| ||
|short_description=p@chr1:22216505..22216565,- | |||
}} | }} |
Latest revision as of 04:13, 28 July 2015
Short description: | p@chr1:22216505..22216565, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22216505..22216565, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.48e-31 | 36 |
endothelial cell of vascular tree | 4.73e-30 | 24 |
meso-epithelial cell | 2.21e-29 | 45 |
mesodermal cell | 1.79e-26 | 121 |
lining cell | 9.06e-24 | 58 |
barrier cell | 9.06e-24 | 58 |
blood vessel endothelial cell | 2.02e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.02e-23 | 18 |
endothelial cell of artery | 8.97e-13 | 9 |
vascular associated smooth muscle cell | 1.34e-10 | 32 |
embryonic cell | 1.57e-10 | 250 |
aortic endothelial cell | 3.08e-09 | 6 |
vein endothelial cell | 1.10e-08 | 6 |
glomerular cell | 3.20e-08 | 7 |
kidney corpuscule cell | 3.20e-08 | 7 |
lymphangioblast | 3.55e-08 | 6 |
endothelial cell of lymphatic vessel | 3.55e-08 | 6 |
vascular lymphangioblast | 3.55e-08 | 6 |
fibroblast | 9.86e-08 | 76 |
glomerular endothelial cell | 3.88e-07 | 5 |
smooth muscle cell | 4.17e-07 | 43 |
smooth muscle myoblast | 4.17e-07 | 43 |
squamous epithelial cell | 9.89e-07 | 63 |