FFCP PHASE1:Hg19::chr1:52607645..52607656,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:52607645..52607656,+ to FFCP PHASE1:Hg19::chr1:52607645..52607656,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9372 | |EntrezGene=9372 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6775 | |HGNC=6775 | ||
|TSSclassifier=strong | |||
|UniProt=O95405 | |UniProt=O95405 | ||
|association_with_transcript=-389bp_to_ENST00000287727,ENST00000357206,ENST00000361625,NM_004799,NM_007323,NM_007324,uc001ctn.2,uc001cto.2,uc001ctp.2_5end | |||
|cluster_id=chr1:52607645..52607656,+ | |||
|description=CAGE_peak_6_at_ZFYVE9_5end | |||
|id=chr1:52607645..52607656,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;6.13e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.67e-09;82!UBERON:0006215;6.13e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.31e-19!34;UBERON:0001869!1.01e-18!32;UBERON:0002791!1.29e-18!33;UBERON:0001049!1.35e-18!57;UBERON:0005068!1.35e-18!57;UBERON:0006241!1.35e-18!57;UBERON:0007135!1.35e-18!57;UBERON:0000073!1.51e-18!94;UBERON:0001016!1.51e-18!94;UBERON:0002020!3.98e-18!34;UBERON:0003528!3.98e-18!34;UBERON:0000955!1.32e-17!69;UBERON:0006238!1.32e-17!69;UBERON:0002780!2.77e-17!41;UBERON:0001890!2.77e-17!41;UBERON:0006240!2.77e-17!41;UBERON:0002616!4.18e-17!59;UBERON:0003080!1.32e-16!42;UBERON:0005743!2.16e-16!86;UBERON:0001017!5.14e-16!82;UBERON:0002619!1.05e-15!22;UBERON:0007023!1.23e-15!115;UBERON:0003075!1.77e-14!86;UBERON:0007284!1.77e-14!86;UBERON:0000956!1.78e-14!25;UBERON:0000203!1.78e-14!25;UBERON:0001950!4.31e-14!20;UBERON:0002346!3.91e-13!90;UBERON:0000153!1.10e-12!129;UBERON:0007811!1.10e-12!129;UBERON:0000033!2.67e-12!123;UBERON:0003056!3.80e-12!61;UBERON:0004121!7.15e-12!169;UBERON:0000924!4.11e-11!173;UBERON:0006601!4.11e-11!173;UBERON:0000475!1.27e-08!365;UBERON:0002420!8.67e-07!9;UBERON:0007245!8.67e-07!9;UBERON:0010009!8.67e-07!9;UBERON:0010011!8.67e-07!9;UBERON:0000454!8.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.66e-27;34!UBERON:0001869;2.47e-26;32!UBERON:0002791;1.02e-21;32!UBERON:0001882;3.81e-21;1!UBERON:0001874;3.81e-21;1!UBERON:0007190;3.81e-21;1!UBERON:0005403;3.81e-21;1!UBERON:0000369;8.54e-21;4!UBERON:0002435;8.54e-21;4!UBERON:0000204;8.54e-21;4!UBERON:0003528;1.42e-20;34!UBERON:0002020;1.42e-20;34!UBERON:0002420;1.79e-20;9!UBERON:0007245;1.79e-20;9!UBERON:0010009;1.79e-20;9!UBERON:0010011;1.79e-20;9!UBERON:0000454;1.79e-20;9!UBERON:0000349;7.50e-17;5!UBERON:0001950;1.71e-15;20!UBERON:0000200;3.25e-14;6!UBERON:0002619;3.49e-14;22!UBERON:0002780;6.82e-13;41!UBERON:0001890;6.82e-13;41!UBERON:0000955;1.14e-12;68!UBERON:0000956;1.36e-12;25!UBERON:0000203;1.36e-12;25!UBERON:0001871;2.51e-12;6!UBERON:0009663;2.51e-12;7!UBERON:0001017;4.66e-12;75!UBERON:0002771;2.87e-11;2!UBERON:0001876;2.87e-11;2!UBERON:0000073;6.43e-11;53!UBERON:0002616;6.43e-11;53!UBERON:0001016;8.14e-10;83!UBERON:0000125;8.45e-10;9!UBERON:0002308;8.45e-10;9!UBERON:0001870;6.13e-08;3!UBERON:0005383;6.13e-08;3!UBERON:0005382;6.13e-08;3!UBERON:0007023;2.62e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.51e-29,32;UBERON:0001893,1.64e-27,34;UBERON:0000073,3.52e-23,53;UBERON:0002616,3.52e-23,53;UBERON:0002780,6.49e-23,41;UBERON:0001890,6.49e-23,41;UBERON:0003080,6.49e-23,41;UBERON:0006240,6.49e-23,41;UBERON:0000955,1.51e-22,68;UBERON:0006238,1.51e-22,68;UBERON:0001049,5.99e-22,56;UBERON:0005068,5.99e-22,56;UBERON:0006241,5.99e-22,56;UBERON:0007135,5.99e-22,56;UBERON:0002791,1.18e-21,32;UBERON:0001874,2.30e-21,1;UBERON:0001882,5.16e-21,1;UBERON:0005403,5.16e-21,1;UBERON:0000369,7.74e-21,4;UBERON:0002435,7.74e-21,4;UBERON:0000204,7.74e-21,4;UBERON:0010082,7.74e-21,4;UBERON:0007190,9.43e-21,1;UBERON:0002420,1.24e-20,9;UBERON:0007245,1.24e-20,9;UBERON:0010009,1.24e-20,9;UBERON:0010011,1.24e-20,9;UBERON:0000454,1.24e-20,9;UBERON:0003528,2.03e-20,34;UBERON:0002020,2.03e-20,34;UBERON:0001017,5.75e-19,81;UBERON:0001016,4.46e-17,89;UBERON:0000349,5.91e-17,5;UBERON:0001950,1.36e-15,20;UBERON:0003056,1.77e-15,61;UBERON:0003075,5.45e-15,82;UBERON:0007284,5.45e-15,82;UBERON:0002346,2.76e-14,86;UBERON:0002619,2.84e-14,22;UBERON:0000200,3.48e-14,6;UBERON:0007023,1.05e-13,114;UBERON:0000956,1.13e-12,25;UBERON:0000203,1.13e-12,25;UBERON:0001871,1.59e-12,6;UBERON:0009663,2.37e-12,7;UBERON:0010371,8.90e-12,104;UBERON:0001876,1.82e-11,2;UBERON:0002771,2.02e-11,2;UBERON:0000125,8.09e-10,9;UBERON:0002308,8.09e-10,9;UBERON:0010314,3.27e-09,132;UBERON:0004121,8.15e-09,171;UBERON:0000924,8.15e-09,171;UBERON:0006601,8.15e-09,171;UBERON:0005383,5.18e-08,3;UBERON:0005382,5.18e-08,3;UBERON:0001870,7.26e-08,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0.427114777637135,0.635795703478686,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.439001141634502,0,0.301586917234893,0,0,0,0,0,0,0,0,0.570762456703795,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,1.02341449813341,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.255679882248303,0.267096106940212,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.663475559587348,0,0.658156191461918,0.10893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0.208843899010911,0.202203398942031,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,1.13959432720582,0.391102765469606,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.971992906528395,0,0,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0.471162288750703,0,1.70836770862748,0.751145584238999,0.573409195690071,0.221858103073705,0.434674820589684,0.276697269872462,0,0.151649117541648,0.285465333544967,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0,0,0.251567901752575,0,0,0,0,0.295710299979268,0,0.449803112163605,0.310525913752519,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0.127894371303652,0.323474434190045,0.157265941855896,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0.352675943690684,0,1.15612605173627,1.41696576325585,0.478901577171454,0.205116364240755,0.252071696221718,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0.163771917510097,0,1.01306376927592,0.781078098613847,0.413373593002368,0.824405532520789,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.679697329768317,0.591954962065642,0,0,0.235479278551542,1.57115589916002,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0,0,0.170718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| |phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0.468642863667593,0,0,0.298897361103602,0.117434498643765,0,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0.427114777637135,0.635795703478686,0,0,0.257640540045629,0,0.506328996723799,0.389748020644795,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.439001141634502,0,0.301586917234893,0,0,0,0,0,0,0,0,0.570762456703795,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.384417447767103,1.02341449813341,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.290033387828457,0.255679882248303,0.267096106940212,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.293016358543788,0.121360521749513,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0.422250816255987,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.482385754501632,1.52581736317083,0.663475559587348,0,0.658156191461918,0.10893846351899,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0.208843899010911,0.202203398942031,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0,0.189559738885464,0.150323419414493,0.414752765588989,0,0,0,0,0,0,0.347119476670262,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,1.13959432720582,0.391102765469606,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0,0,0,0.135904206073614,0.313808538937,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0,0.971992906528395,0,0,0.157363764404994,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0.471162288750703,0,1.70836770862748,0.751145584238999,0.573409195690071,0.221858103073705,0.434674820589684,0.276697269872462,0,0.151649117541648,0.285465333544967,0.470531639396343,0,0,0.149254802886874,0.467426619694449,0,0,0.251567901752575,0,0,0,0,0.295710299979268,0,0.449803112163605,0.310525913752519,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0.622077260032973,0.127894371303652,0.323474434190045,0.157265941855896,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0.352675943690684,0,1.15612605173627,1.41696576325585,0.478901577171454,0.205116364240755,0.252071696221718,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0.163771917510097,0,1.01306376927592,0.781078098613847,0.413373593002368,0.824405532520789,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.679697329768317,0.591954962065642,0,0,0.235479278551542,1.57115589916002,0,0,0.215927591218621,0,0.357382720883282,0,0,0,0,0,0.170718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| ||
|short_description=p6@ZFYVE9 | |||
}} | }} |
Latest revision as of 12:41, 18 September 2015
Short description: | p6@ZFYVE9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZFYVE9_5end |
Coexpression cluster: | NA |
Association with transcript: | -389bp_to_ENST00000287727, ENST00000357206, ENST00000361625, NM_004799, NM_007323, NM_007324, uc001ctn.2, uc001cto.2, uc001ctp.2_5end |
EntrezGene: | ZFYVE9 |
HGNC: | 6775 |
UniProt: | O95405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 7.76e-08 | 3 |