FFCP PHASE1:Hg19::chr1:93913665..93913705,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:93913665..93913705,+ to FFCP PHASE1:Hg19::chr1:93913665..93913705,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54874 | |EntrezGene=54874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20851 | |HGNC=20851 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0N5,B4DSI7 | |UniProt=Q5T0N5,B4DSI7 | ||
|association_with_transcript=0bp_to_ENST00000260506,ENST00000271234,NM_001024948,NM_001164473,NM_017737_5end | |||
|cluster_id=chr1:93913665..93913705,+ | |||
|coexpression_cluster_id=C2604 | |||
|description=CAGE_peak_1_at_FNBP1L_5end | |||
|id=chr1:93913665..93913705,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.33e-15!254;CL:0002139!3.26e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.27e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.04e-15,253;CL:0002139,3.18e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.59e-17!143;DOID:305!1.97e-13!106;DOID:3095!8.80e-10!22;DOID:2994!8.80e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.97e-10;22!DOID:2994;7.97e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.91e-17,143;DOID:305,2.14e-13,106;DOID:3095,8.49e-10,22;DOID:2994,8.49e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000468!6.87e-16!659;UBERON:0000924!1.23e-13!173;UBERON:0006601!1.23e-13!173;UBERON:0001017!2.70e-13!82;UBERON:0000073!3.97e-13!94;UBERON:0001016!3.97e-13!94;UBERON:0004121!7.28e-13!169;UBERON:0005743!2.39e-12!86;UBERON:0004111!6.22e-12!241;UBERON:0000922!3.83e-11!612;UBERON:0000467!1.10e-10!625;UBERON:0000480!1.37e-10!626;UBERON:0000477!7.51e-10!286;UBERON:0007023!8.00e-10!115;UBERON:0000481!8.86e-10!347;UBERON:0000025!1.30e-09!194;UBERON:0000955!2.79e-09!69;UBERON:0006238!2.79e-09!69;UBERON:0002050!3.86e-09!605;UBERON:0005423!3.86e-09!605;UBERON:0002346!5.29e-09!90;UBERON:0000923!7.76e-09!604;UBERON:0005291!7.76e-09!604;UBERON:0006598!7.76e-09!604;UBERON:0002532!7.76e-09!604;UBERON:0001049!1.14e-08!57;UBERON:0005068!1.14e-08!57;UBERON:0006241!1.14e-08!57;UBERON:0007135!1.14e-08!57;UBERON:0000483!1.92e-08!309;UBERON:0003075!2.84e-08!86;UBERON:0007284!2.84e-08!86;UBERON:0000475!2.98e-08!365;UBERON:0000119!3.00e-08!312;UBERON:0000033!3.18e-08!123;UBERON:0002616!9.31e-08!59;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0000062!1.83e-07!511;UBERON:0003080!3.45e-07!42;UBERON:0000064!5.69e-07!219;UBERON:0004921!5.76e-07!129;UBERON:0004185!5.76e-07!129;UBERON:0002780!8.95e-07!41;UBERON:0001890!8.95e-07!41;UBERON:0006240!8.95e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.49e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.87e-17,223;UBERON:0001016,1.24e-13,89;UBERON:0001017,7.09e-13,81;UBERON:0004121,8.96e-13,171;UBERON:0000924,8.96e-13,171;UBERON:0006601,8.96e-13,171;UBERON:0004111,1.85e-11,240;UBERON:0000922,9.77e-10,592;UBERON:0007023,1.19e-09,114;UBERON:0000025,2.45e-09,192;UBERON:0000955,6.74e-09,68;UBERON:0006238,6.74e-09,68;UBERON:0001049,2.84e-08,56;UBERON:0005068,2.84e-08,56;UBERON:0006241,2.84e-08,56;UBERON:0007135,2.84e-08,56;UBERON:0002346,4.88e-08,86;UBERON:0000483,1.25e-07,306;UBERON:0000073,1.44e-07,53;UBERON:0002616,1.44e-07,53;UBERON:0000119,1.90e-07,309;UBERON:0003075,2.48e-07,82;UBERON:0007284,2.48e-07,82;UBERON:0010371,3.47e-07,104;UBERON:0005423,3.52e-07,581;UBERON:0002780,8.75e-07,41;UBERON:0001890,8.75e-07,41;UBERON:0003080,8.75e-07,41;UBERON:0006240,8.75e-07,41 | |||
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| ||
|short_description=p1@FNBP1L | |||
}} | }} |
Latest revision as of 21:41, 19 September 2015
Short description: | p1@FNBP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FNBP1L_5end |
Coexpression cluster: | C2604_Mast_occipital_parietal_temporal_duodenum_Neural_hepatoblastoma |
Association with transcript: | 0bp_to_ENST00000260506, ENST00000271234, NM_001024948, NM_001164473, NM_017737_5end |
EntrezGene: | FNBP1L |
HGNC: | 20851 |
UniProt: | Q5T0N5B4DSI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.04e-15 | 253 |
endothelial cell of vascular tree | 3.18e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.87e-17 | 223 |
nervous system | 1.24e-13 | 89 |
central nervous system | 7.09e-13 | 81 |
ectoderm-derived structure | 8.96e-13 | 171 |
ectoderm | 8.96e-13 | 171 |
presumptive ectoderm | 8.96e-13 | 171 |
anatomical conduit | 1.85e-11 | 240 |
embryo | 9.77e-10 | 592 |
adult organism | 1.19e-09 | 114 |
tube | 2.45e-09 | 192 |
brain | 6.74e-09 | 68 |
future brain | 6.74e-09 | 68 |
neural tube | 2.84e-08 | 56 |
neural rod | 2.84e-08 | 56 |
future spinal cord | 2.84e-08 | 56 |
neural keel | 2.84e-08 | 56 |
neurectoderm | 4.88e-08 | 86 |
epithelium | 1.25e-07 | 306 |
regional part of nervous system | 1.44e-07 | 53 |
regional part of brain | 1.44e-07 | 53 |
cell layer | 1.90e-07 | 309 |
neural plate | 2.48e-07 | 82 |
presumptive neural plate | 2.48e-07 | 82 |
ecto-epithelium | 3.47e-07 | 104 |
developing anatomical structure | 3.52e-07 | 581 |
regional part of forebrain | 8.75e-07 | 41 |
forebrain | 8.75e-07 | 41 |
anterior neural tube | 8.75e-07 | 41 |
future forebrain | 8.75e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.91e-17 | 143 |
carcinoma | 2.14e-13 | 106 |
germ cell and embryonal cancer | 8.49e-10 | 22 |
germ cell cancer | 8.49e-10 | 22 |