FFCP PHASE1:Hg19::chr20:1875534..1875598,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:1875534..1875598,+ to FFCP PHASE1:Hg19::chr20:1875534..1875598,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140885 | |EntrezGene=140885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9662 | |HGNC=9662 | ||
|TSSclassifier=strong | |||
|UniProt=B2R6C3,P78324 | |UniProt=B2R6C3,P78324 | ||
|association_with_transcript=-227bp_to_NM_001040023,uc002wfs.2_5end | |||
|cluster_id=chr20:1875534..1875598,+ | |||
|description=CAGE_peak_2_at_SIRPA_5end | |||
|id=chr20:1875534..1875598,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.54e-12!76;CL:0002078!6.24e-12!44;CL:0002194!1.29e-11!63;CL:0000576!1.29e-11!63;CL:0000040!1.29e-11!63;CL:0000559!1.29e-11!63;CL:0002009!1.95e-11!65;CL:0000115!3.83e-11!35;CL:0000557!9.49e-11!71;CL:0002057!4.56e-10!42;CL:0000222!9.81e-10!119;CL:0000213!1.58e-09!57;CL:0000215!1.58e-09!57;CL:0000839!1.95e-09!70;CL:0002139!2.82e-08!24;CL:0000860!8.88e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-13;39!CL:0000234;1.20e-13;39!CL:0000860;2.14e-12;33!CL:0002057;2.14e-12;33!CL:0000115;1.41e-09;36!CL:0002078;1.34e-08;45!CL:0002139;2.63e-08;24!CL:0000576;3.08e-07;48!CL:0000766;8.63e-07;69!CL:1000497;9.94e-07;17!CL:0002518;9.94e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.16e-14,72;CL:0000473,3.24e-13,48;CL:0000234,3.24e-13,48;CL:0002194,3.41e-13,59;CL:0000576,3.41e-13,59;CL:0000040,3.41e-13,59;CL:0000559,3.41e-13,59;CL:0002009,5.88e-13,61;CL:0000557,3.71e-12,67;CL:0002078,5.93e-12,45;CL:0000115,2.80e-11,36;CL:0000839,1.10e-10,66;CL:0000860,6.33e-10,42;CL:0002057,6.33e-10,42;CL:0000222,9.16e-10,121;CL:0000213,2.14e-09,58;CL:0000215,2.14e-09,58;CL:0002139,2.60e-08,24;CL:0000763,2.29e-07,108;CL:0000049,2.29e-07,108;CL:1000497,9.99e-07,17;CL:0002518,9.99e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002057;9.75e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.08e-13!216;UBERON:0000467!4.34e-13!625;UBERON:0000480!7.85e-13!626;UBERON:0000025!9.20e-13!194;UBERON:0004111!4.66e-12!241;UBERON:0000468!5.89e-12!659;UBERON:0003914!5.93e-10!118;UBERON:0002405!6.60e-10!115;UBERON:0002050!9.95e-10!605;UBERON:0005423!9.95e-10!605;UBERON:0000923!1.07e-09!604;UBERON:0005291!1.07e-09!604;UBERON:0006598!1.07e-09!604;UBERON:0002532!1.07e-09!604;UBERON:0000922!4.26e-09!612;UBERON:0000483!5.40e-09!309;UBERON:0002371!7.52e-09!80;UBERON:0000055!1.07e-08!69;UBERON:0000119!1.25e-08!312;UBERON:0002193!2.64e-08!112;UBERON:0002204!2.92e-08!167;UBERON:0000477!1.11e-07!286;UBERON:0004765!2.02e-07!101;UBERON:0001434!2.02e-07!101;UBERON:0001981!3.10e-07!60;UBERON:0007500!3.10e-07!60;UBERON:0004537!3.10e-07!60;UBERON:0006965!3.10e-07!60;UBERON:0001474!3.44e-07!86;UBERON:0001049!6.35e-07!57;UBERON:0005068!6.35e-07!57;UBERON:0006241!6.35e-07!57;UBERON:0007135!6.35e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.07e-12,192;UBERON:0003081,9.57e-12,203;UBERON:0004111,1.90e-11,240;UBERON:0003914,5.88e-10,117;UBERON:0002371,6.85e-10,76;UBERON:0002405,8.72e-10,93;UBERON:0000922,1.26e-09,592;UBERON:0005423,1.28e-09,581;UBERON:0002193,4.29e-09,108;UBERON:0000483,1.82e-08,306;UBERON:0002204,2.18e-08,167;UBERON:0000055,3.04e-08,68;UBERON:0000119,4.11e-08,309;UBERON:0001474,6.27e-08,82;UBERON:0004765,1.82e-07,90;UBERON:0001434,1.87e-07,100;UBERON:0002050,2.42e-07,564;UBERON:0002390,2.91e-07,98;UBERON:0003061,2.91e-07,98;UBERON:0000923,5.66e-07,560;UBERON:0010316,5.66e-07,560;UBERON:0005291,5.66e-07,560;UBERON:0006598,5.66e-07,560;UBERON:0010317,5.66e-07,560;UBERON:0002532,5.66e-07,560;UBERON:0000926,5.75e-07,315;UBERON:0004120,5.75e-07,315;UBERON:0006603,5.75e-07,315;UBERON:0007500,7.51e-07,59;UBERON:0001981,7.51e-07,59;UBERON:0004537,7.51e-07,59;UBERON:0006965,7.51e-07,59 | |||
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| ||
|short_description=p2@SIRPA | |||
}} | }} |
Latest revision as of 07:46, 20 September 2015
Short description: | p2@SIRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIRPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_NM_001040023, uc002wfs.2_5end |
EntrezGene: | SIRPA |
HGNC: | 9662 |
UniProt: | B2R6C3P78324 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.16e-14 | 72 |
defensive cell | 3.24e-13 | 48 |
phagocyte | 3.24e-13 | 48 |
monopoietic cell | 3.41e-13 | 59 |
monocyte | 3.41e-13 | 59 |
monoblast | 3.41e-13 | 59 |
promonocyte | 3.41e-13 | 59 |
macrophage dendritic cell progenitor | 5.88e-13 | 61 |
granulocyte monocyte progenitor cell | 3.71e-12 | 67 |
meso-epithelial cell | 5.93e-12 | 45 |
endothelial cell | 2.80e-11 | 36 |
myeloid lineage restricted progenitor cell | 1.10e-10 | 66 |
classical monocyte | 6.33e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-10 | 42 |
mesodermal cell | 9.16e-10 | 121 |
lining cell | 2.14e-09 | 58 |
barrier cell | 2.14e-09 | 58 |
endothelial cell of vascular tree | 2.60e-08 | 24 |
myeloid cell | 2.29e-07 | 108 |
common myeloid progenitor | 2.29e-07 | 108 |
kidney cell | 9.99e-07 | 17 |
kidney epithelial cell | 9.99e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
tube | 2.07e-12 | 192 |
lateral plate mesoderm | 9.57e-12 | 203 |
anatomical conduit | 1.90e-11 | 240 |
epithelial tube | 5.88e-10 | 117 |
bone marrow | 6.85e-10 | 76 |
immune system | 8.72e-10 | 93 |
embryo | 1.26e-09 | 592 |
developing anatomical structure | 1.28e-09 | 581 |
hemolymphoid system | 4.29e-09 | 108 |
epithelium | 1.82e-08 | 306 |
musculoskeletal system | 2.18e-08 | 167 |
vessel | 3.04e-08 | 68 |
cell layer | 4.11e-08 | 309 |
bone element | 6.27e-08 | 82 |
skeletal element | 1.82e-07 | 90 |
skeletal system | 1.87e-07 | 100 |
embryonic structure | 2.42e-07 | 564 |
hematopoietic system | 2.91e-07 | 98 |
blood island | 2.91e-07 | 98 |
germ layer | 5.66e-07 | 560 |
germ layer / neural crest | 5.66e-07 | 560 |
embryonic tissue | 5.66e-07 | 560 |
presumptive structure | 5.66e-07 | 560 |
germ layer / neural crest derived structure | 5.66e-07 | 560 |
epiblast (generic) | 5.66e-07 | 560 |
mesoderm | 5.75e-07 | 315 |
mesoderm-derived structure | 5.75e-07 | 315 |
presumptive mesoderm | 5.75e-07 | 315 |
epithelial tube open at both ends | 7.51e-07 | 59 |
blood vessel | 7.51e-07 | 59 |
blood vasculature | 7.51e-07 | 59 |
vascular cord | 7.51e-07 | 59 |