FFCP PHASE1:Hg19::chr22:21355896..21355920,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:21355896..21355920,- to FFCP PHASE1:Hg19::chr22:21355896..21355920,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80764 | |EntrezGene=80764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23190 | |HGNC=23190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_ENST00000488975_5end | |||
|cluster_id=chr22:21355896..21355920,- | |||
|description=CAGE_peak_4_at_THAP7_5end | |||
|id=chr22:21355896..21355920,- | |||
|ontology_enrichment_celltype=CL:0000066!1.13e-15!254;CL:1000449!1.94e-08!16;CL:1000497!5.98e-08!18;CL:0002518!5.98e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.90e-15;15!CL:1000497;2.12e-13;17!CL:0002518;2.12e-13;17!CL:0002681;7.83e-12;12!CL:0002584;7.83e-12;12!CL:1000507;4.72e-11;10!CL:1000494;4.72e-11;10!CL:1000746;6.25e-11;7!CL:1000612;6.25e-11;7!CL:0002202;1.05e-07;9!CL:0002632;1.05e-07;9!CL:0000123;1.38e-07;2!CL:0000242;1.38e-07;2!CL:0000650;2.26e-07;2!CL:1000500;2.26e-07;2!CL:1000618;2.26e-07;2!CL:1001318;2.26e-07;2!CL:0002173;2.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.37e-15,15;CL:1000497,2.56e-13,17;CL:0002518,2.56e-13,17;CL:0002681,9.75e-12,12;CL:0002584,9.75e-12,12;CL:1000507,4.90e-11,10;CL:1000494,4.90e-11,10;CL:1000746,7.37e-11,7;CL:1000612,7.37e-11,7;CL:0000066,2.56e-10,253;CL:0000242,1.44e-07,2;CL:0002202,1.64e-07,9;CL:0002632,1.64e-07,9;CL:0000650,2.09e-07,2;CL:1000500,2.09e-07,2;CL:1000618,2.09e-07,2;CL:1001318,2.09e-07,2;CL:0002173,2.09e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.50e-13!235;DOID:14566!7.60e-13!239;DOID:0050687!1.60e-10!143;DOID:305!3.30e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!5.51e-12!44;UBERON:0001008!2.56e-11!45;UBERON:0002113!2.65e-11!27;UBERON:0003918!2.65e-11!27;UBERON:0005095!2.65e-11!27;UBERON:0007687!2.65e-11!27;UBERON:0004876!1.13e-09!20;UBERON:0000489!1.77e-09!32;UBERON:0003064!4.64e-09!37;UBERON:0000058!5.86e-09!26;UBERON:0000080!8.54e-09!18;UBERON:0002120!8.54e-09!18;UBERON:0004875!8.54e-09!18;UBERON:0005721!8.54e-09!18;UBERON:0005754!8.54e-09!18;UBERON:0007297!8.54e-09!18;UBERON:0004211!1.94e-08!16;UBERON:0001285!1.94e-08!16;UBERON:0007684!1.94e-08!16;UBERON:0003220!1.94e-08!16;UBERON:0004208!1.94e-08!16;UBERON:0006555!3.72e-08!17;UBERON:0005103!3.72e-08!17;UBERON:0000083!3.72e-08!17;UBERON:0009201!3.72e-08!17;UBERON:0004819!3.72e-08!17;UBERON:0006553!3.72e-08!17;UBERON:0003074!3.72e-08!17;UBERON:0003060!3.72e-08!17;UBERON:0003887!9.08e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.20e-15;24!UBERON:0011143;1.20e-15;24!UBERON:0006555;1.90e-15;15!UBERON:0004819;1.90e-15;15!UBERON:0001285;1.90e-15;15!UBERON:0007684;1.90e-15;15!UBERON:0000489;1.89e-12;29!UBERON:0006554;6.13e-12;30!UBERON:0001008;6.13e-12;30!UBERON:0001225;7.83e-12;12!UBERON:0008987;7.83e-12;12!UBERON:0001851;7.83e-12;15!UBERON:0004211;4.72e-11;10!UBERON:0009773;4.72e-11;10!UBERON:0001231;4.72e-11;10!UBERON:0004810;4.72e-11;10!UBERON:0000074;6.25e-11;7!UBERON:0001229;6.25e-11;7!UBERON:0001737;1.43e-10;9!UBERON:0001557;1.43e-10;9!UBERON:0000353;3.15e-09;15!UBERON:0000072;5.08e-09;37!UBERON:0000065;1.18e-07;44!UBERON:0003567;2.26e-07;2!UBERON:0003838;2.26e-07;2!UBERON:0003586;2.26e-07;2!UBERON:0005169;2.26e-07;2!UBERON:0002321;2.26e-07;2!UBERON:0005215;2.26e-07;2!UBERON:0002303;2.26e-07;2!UBERON:0002319;2.26e-07;2!UBERON:0005172;4.74e-07;52!UBERON:0005173;4.74e-07;52!UBERON:0004909;5.63e-07;2!UBERON:0005904;8.36e-07;4 | |||
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| ||
|short_description=p4@THAP7 | |||
}} | }} |
Latest revision as of 05:50, 19 September 2015
Short description: | p4@THAP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_THAP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_ENST00000488975_5end |
EntrezGene: | THAP7 |
HGNC: | 23190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.37e-15 | 15 |
kidney cell | 2.56e-13 | 17 |
kidney epithelial cell | 2.56e-13 | 17 |
kidney cortical cell | 9.75e-12 | 12 |
renal cortical epithelial cell | 9.75e-12 | 12 |
kidney tubule cell | 4.90e-11 | 10 |
nephron tubule epithelial cell | 4.90e-11 | 10 |
glomerular cell | 7.37e-11 | 7 |
kidney corpuscule cell | 7.37e-11 | 7 |
epithelial cell | 2.56e-10 | 253 |
Merkel cell | 1.44e-07 | 2 |
epithelial cell of tracheobronchial tree | 1.64e-07 | 9 |
epithelial cell of lower respiratory tract | 1.64e-07 | 9 |
mesangial cell | 2.09e-07 | 2 |
kidney interstitial cell | 2.09e-07 | 2 |
juxtaglomerular complex cell | 2.09e-07 | 2 |
renal interstitial pericyte | 2.09e-07 | 2 |
extraglomerular mesangial cell | 2.09e-07 | 2 |