FFCP PHASE1:Hg19::chr22:46368397..46368406,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:46368397..46368406,- to FFCP PHASE1:Hg19::chr22:46368397..46368406,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7477 | |EntrezGene=7477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12787 | |HGNC=12787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-153bp_to_uc010haa.2_5end | |||
|cluster_id=chr22:46368397..46368406,- | |||
|description=CAGE_peak_5_at_WNT7B_5end | |||
|id=chr22:46368397..46368406,- | |||
|ontology_enrichment_celltype=CL:1000449!2.91e-12!16;CL:1000507!6.13e-11!12;CL:1000494!6.13e-11!12;CL:1000497!1.27e-10!18;CL:0002518!1.27e-10!18;CL:0000128!1.36e-10!7;CL:0000126!1.36e-10!7;CL:0000127!1.36e-10!7;CL:0002453!1.36e-10!7;CL:0002681!1.01e-09!13;CL:0002584!1.01e-09!13;CL:0002582!8.03e-08!3;CL:0002603!1.32e-07!3;CL:0002621!2.16e-07!3;CL:0000064!3.72e-07!3;CL:0005012!3.72e-07!3;CL:0000067!3.72e-07!3;CL:0002304!3.72e-07!3;CL:0000669!4.24e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002582;5.97e-29;3!CL:1000507;3.56e-24;10!CL:1000494;3.56e-24;10!CL:1000449;9.81e-23;15!CL:0000650;4.89e-20;2!CL:1000500;4.89e-20;2!CL:1000618;4.89e-20;2!CL:1001318;4.89e-20;2!CL:0002173;4.89e-20;2!CL:1000497;5.09e-20;17!CL:0002518;5.09e-20;17!CL:0002603;1.09e-13;3!CL:0000346;1.93e-13;3!CL:1000428;1.93e-13;3!CL:0002334;5.27e-13;12!CL:0002681;5.97e-13;12!CL:0002584;5.97e-13;12!CL:1000746;8.94e-13;7!CL:1000612;8.94e-13;7!CL:0000669;1.69e-10;4!CL:0000062;4.66e-10;9!CL:0002559;2.00e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,5.18e-29,3;CL:1000507,2.80e-24,10;CL:1000494,2.80e-24,10;CL:1000449,1.00e-22,15;CL:0000650,4.04e-20,2;CL:1000500,4.04e-20,2;CL:1000618,4.04e-20,2;CL:1001318,4.04e-20,2;CL:0002173,4.04e-20,2;CL:1000497,5.19e-20,17;CL:0002518,5.19e-20,17;CL:0002603,8.44e-14,3;CL:0000346,1.82e-13,3;CL:1000428,1.82e-13,3;CL:0002334,5.12e-13,12;CL:0002681,6.17e-13,12;CL:0002584,6.17e-13,12;CL:1000746,1.03e-12,7;CL:1000612,1.03e-12,7;CL:0000669,1.54e-10,4;CL:0002559,1.93e-08,5;CL:0000062,2.85e-08,11;CL:0000375,2.85e-08,11;CL:0000335,2.85e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.54e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001893!8.57e-13!34;UBERON:0001049!1.21e-12!57;UBERON:0005068!1.21e-12!57;UBERON:0006241!1.21e-12!57;UBERON:0007135!1.21e-12!57;UBERON:0001869!2.64e-12!32;UBERON:0004211!2.91e-12!16;UBERON:0001285!2.91e-12!16;UBERON:0007684!2.91e-12!16;UBERON:0003220!2.91e-12!16;UBERON:0004208!2.91e-12!16;UBERON:0002791!8.19e-12!33;UBERON:0002020!2.09e-11!34;UBERON:0003528!2.09e-11!34;UBERON:0006555!2.15e-11!17;UBERON:0005103!2.15e-11!17;UBERON:0000083!2.15e-11!17;UBERON:0009201!2.15e-11!17;UBERON:0004819!2.15e-11!17;UBERON:0006553!2.15e-11!17;UBERON:0003074!2.15e-11!17;UBERON:0003060!2.15e-11!17;UBERON:0000956!3.58e-11!25;UBERON:0000203!3.58e-11!25;UBERON:0000033!5.10e-11!123;UBERON:0009773!6.13e-11!12;UBERON:0001231!6.13e-11!12;UBERON:0004810!6.13e-11!12;UBERON:0002616!8.79e-11!59;UBERON:0003075!9.22e-11!86;UBERON:0007284!9.22e-11!86;UBERON:0000475!9.80e-11!365;UBERON:0000080!1.27e-10!18;UBERON:0002120!1.27e-10!18;UBERON:0004875!1.27e-10!18;UBERON:0005721!1.27e-10!18;UBERON:0005754!1.27e-10!18;UBERON:0007297!1.27e-10!18;UBERON:0000153!4.31e-10!129;UBERON:0007811!4.31e-10!129;UBERON:0003056!4.56e-10!61;UBERON:0000064!5.04e-10!219;UBERON:0002346!5.74e-10!90;UBERON:0002780!6.55e-10!41;UBERON:0001890!6.55e-10!41;UBERON:0006240!6.55e-10!41;UBERON:0001225!1.01e-09!13;UBERON:0008987!1.01e-09!13;UBERON:0003080!1.41e-09!42;UBERON:0004121!1.93e-09!169;UBERON:0004876!2.56e-09!20;UBERON:0000955!3.67e-09!69;UBERON:0006238!3.67e-09!69;UBERON:0000924!5.42e-09!173;UBERON:0006601!5.42e-09!173;UBERON:0003887!9.26e-09!21;UBERON:0000488!1.26e-08!4;UBERON:0001017!1.47e-08!82;UBERON:0005743!6.90e-08!86;UBERON:0000119!9.63e-08!312;UBERON:0002619!9.65e-08!22;UBERON:0001851!1.38e-07!16;UBERON:0000483!2.03e-07!309;UBERON:0001949!2.16e-07!3;UBERON:0001778!3.72e-07!3;UBERON:0001775!3.72e-07!3;UBERON:0001950!3.88e-07!20;UBERON:0000353!4.79e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.56e-24;10!UBERON:0009773;3.56e-24;10!UBERON:0001231;3.56e-24;10!UBERON:0004810;3.56e-24;10!UBERON:0006555;9.81e-23;15!UBERON:0004819;9.81e-23;15!UBERON:0001285;9.81e-23;15!UBERON:0007684;9.81e-23;15!UBERON:0003567;4.89e-20;2!UBERON:0003838;4.89e-20;2!UBERON:0003586;4.89e-20;2!UBERON:0005169;4.89e-20;2!UBERON:0002321;4.89e-20;2!UBERON:0005215;4.89e-20;2!UBERON:0002303;4.89e-20;2!UBERON:0002319;4.89e-20;2!UBERON:0002113;4.54e-14;24!UBERON:0011143;4.54e-14;24!UBERON:0000412;1.93e-13;3!UBERON:0001992;1.93e-13;3!UBERON:0001225;5.97e-13;12!UBERON:0008987;5.97e-13;12!UBERON:0000074;8.94e-13;7!UBERON:0001229;8.94e-13;7!UBERON:0000489;1.43e-11;29!UBERON:0006554;3.59e-11;30!UBERON:0001008;3.59e-11;30!UBERON:0003891;1.69e-10;4!UBERON:0001851;2.12e-10;15!UBERON:0000353;2.12e-10;15!UBERON:0002073;2.00e-08;5!UBERON:0002037;2.78e-07;6!UBERON:0010371;3.08e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.80e-24,10;UBERON:0004211,1.00e-22,15;UBERON:0009773,1.00e-22,15;UBERON:0001231,1.00e-22,15;UBERON:0001285,1.00e-22,15;UBERON:0007684,1.00e-22,15;UBERON:0004208,1.00e-22,15;UBERON:0006555,2.77e-21,16;UBERON:0004819,2.77e-21,16;UBERON:0003567,4.04e-20,2;UBERON:0003838,4.04e-20,2;UBERON:0003586,4.04e-20,2;UBERON:0005169,4.04e-20,2;UBERON:0002321,4.04e-20,2;UBERON:0005215,4.04e-20,2;UBERON:0002303,4.04e-20,2;UBERON:0002319,4.04e-20,2;UBERON:0000412,1.82e-13,3;UBERON:0001992,1.82e-13,3;UBERON:0002113,5.98e-13,26;UBERON:0003918,5.98e-13,26;UBERON:0011143,5.98e-13,26;UBERON:0005095,5.98e-13,26;UBERON:0007687,5.98e-13,26;UBERON:0001225,6.17e-13,12;UBERON:0008987,6.17e-13,12;UBERON:0010532,1.03e-12,7;UBERON:0000074,1.03e-12,7;UBERON:0001229,1.03e-12,7;UBERON:0001230,1.03e-12,7;UBERON:0003220,1.03e-12,7;UBERON:0005749,1.03e-12,7;UBERON:0004199,1.03e-12,7;UBERON:0004209,1.03e-12,7;UBERON:0004198,1.03e-12,7;UBERON:0005103,3.41e-11,8;UBERON:0000083,3.41e-11,8;UBERON:0009201,3.41e-11,8;UBERON:0006553,3.41e-11,8;UBERON:0003074,3.41e-11,8;UBERON:0003060,3.41e-11,8;UBERON:0000489,8.60e-11,31;UBERON:0003891,1.54e-10,4;UBERON:0001851,2.17e-10,15;UBERON:0000353,2.17e-10,15;UBERON:0000080,5.20e-10,9;UBERON:0002120,5.20e-10,9;UBERON:0004875,5.20e-10,9;UBERON:0005721,5.20e-10,9;UBERON:0005754,5.20e-10,9;UBERON:0007297,5.20e-10,9;UBERON:0002073,1.93e-08,5;UBERON:0005086,1.93e-08,5;UBERON:0004876,2.78e-08,11;UBERON:0003887,1.24e-07,12;UBERON:0002037,2.45e-07,6;UBERON:0006215,2.45e-07,6;UBERON:0006554,5.83e-07,47;UBERON:0001008,8.33e-07,48 | |||
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| ||
|short_description=p5@WNT7B | |||
}} | }} |
Latest revision as of 04:47, 25 September 2015
Short description: | p5@WNT7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WNT7B_5end |
Coexpression cluster: | NA |
Association with transcript: | -153bp_to_uc010haa.2_5end |
EntrezGene: | WNT7B |
HGNC: | 12787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 5.18e-29 | 3 |
kidney tubule cell | 2.80e-24 | 10 |
nephron tubule epithelial cell | 2.80e-24 | 10 |
epithelial cell of nephron | 1.00e-22 | 15 |
mesangial cell | 4.04e-20 | 2 |
kidney interstitial cell | 4.04e-20 | 2 |
juxtaglomerular complex cell | 4.04e-20 | 2 |
renal interstitial pericyte | 4.04e-20 | 2 |
extraglomerular mesangial cell | 4.04e-20 | 2 |
kidney cell | 5.19e-20 | 17 |
kidney epithelial cell | 5.19e-20 | 17 |
astrocyte of the cerebellum | 8.44e-14 | 3 |
hair follicle dermal papilla cell | 1.82e-13 | 3 |
stem cell of epidermis | 1.82e-13 | 3 |
preadipocyte | 5.12e-13 | 12 |
kidney cortical cell | 6.17e-13 | 12 |
renal cortical epithelial cell | 6.17e-13 | 12 |
glomerular cell | 1.03e-12 | 7 |
kidney corpuscule cell | 1.03e-12 | 7 |
pericyte cell | 1.54e-10 | 4 |
hair follicle cell | 1.93e-08 | 5 |
osteoblast | 2.85e-08 | 11 |
osteoprogenitor cell | 2.85e-08 | 11 |
mesenchyme condensation cell | 2.85e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.10e-10 | 1 |