FFCP PHASE1:Hg19::chr4:1725231..1725273,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:1725231..1725273,+ to FFCP PHASE1:Hg19::chr4:1725231..1725273,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10460 | |EntrezGene=10460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11524 | |HGNC=11524 | ||
|TSSclassifier=strong | |||
|UniProt=B4E355 | |UniProt=B4E355 | ||
|association_with_transcript=0bp_to_AK304579,AK310660_5end | |||
|cluster_id=chr4:1725231..1725273,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_2_at_TACC3_5end | |||
|id=chr4:1725231..1725273,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.89e-63!172;CL:0000566!3.89e-63!172;CL:0002032!6.87e-59!165;CL:0000837!6.87e-59!165;CL:0000988!7.36e-58!182;CL:0000738!8.30e-56!140;CL:0002087!7.00e-47!119;CL:0002031!2.70e-45!124;CL:0000763!1.13e-37!112;CL:0000049!1.13e-37!112;CL:0000766!2.06e-30!76;CL:0002009!1.42e-26!65;CL:0000557!6.05e-26!71;CL:0002194!9.47e-26!63;CL:0000576!9.47e-26!63;CL:0000040!9.47e-26!63;CL:0000559!9.47e-26!63;CL:0000839!2.87e-25!70;CL:0002057!5.96e-24!42;CL:0000860!1.57e-21!45;CL:0000542!4.41e-18!53;CL:0000051!4.41e-18!53;CL:0000838!5.42e-18!52;CL:0000791!3.92e-11!18;CL:0000789!3.92e-11!18;CL:0002420!3.92e-11!18;CL:0002419!3.92e-11!18;CL:0000790!3.92e-11!18;CL:0000084!1.56e-10!25;CL:0000827!1.56e-10!25;CL:0000134!1.24e-08!358;CL:0000625!3.72e-08!11;CL:0002320!1.40e-07!365;CL:0000945!1.76e-07!24;CL:0000826!1.76e-07!24;CL:0000094!2.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.33e-26;33!CL:0002057;5.33e-26;33!CL:0000473;1.25e-25;39!CL:0000234;1.25e-25;39!CL:0000576;4.06e-23;48!CL:0000766;1.08e-18;69!CL:0000791;5.91e-17;18!CL:0000789;5.91e-17;18!CL:0002419;5.91e-17;18!CL:0002087;3.17e-16;104!CL:0000738;1.97e-14;136!CL:0000763;2.95e-14;100!CL:0000625;8.04e-12;11!CL:0000084;8.95e-12;25!CL:0000988;1.76e-11;177!CL:0000094;1.23e-10;8!CL:0000542;7.29e-10;53!CL:0000451;5.35e-09;10!CL:0000236;7.23e-09;13!CL:0000624;3.83e-08;6!CL:0000990;8.14e-08;8!CL:0000081;4.41e-07;11!CL:0002393;5.28e-07;6!CL:0002397;5.28e-07;6!CL:0000219;6.48e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.65e-75,168;CL:0000738,1.44e-70,136;CL:0002032,2.31e-70,161;CL:0000837,2.31e-70,161;CL:0000988,1.57e-69,177;CL:0002087,1.24e-59,115;CL:0002031,7.41e-56,120;CL:0000763,1.28e-51,108;CL:0000049,1.28e-51,108;CL:0000766,4.58e-47,72;CL:0002009,8.98e-43,61;CL:0002194,1.73e-41,59;CL:0000576,1.73e-41,59;CL:0000040,1.73e-41,59;CL:0000559,1.73e-41,59;CL:0000473,5.67e-41,48;CL:0000234,5.67e-41,48;CL:0000557,5.80e-40,67;CL:0000839,1.21e-37,66;CL:0000860,1.67e-36,42;CL:0002057,1.67e-36,42;CL:0000791,5.84e-17,18;CL:0000789,5.84e-17,18;CL:0002420,5.84e-17,18;CL:0002419,5.84e-17,18;CL:0000790,5.84e-17,18;CL:0000134,1.03e-16,354;CL:0000838,2.29e-16,52;CL:0000542,7.71e-16,53;CL:0000051,7.71e-16,53;CL:0002320,1.05e-15,361;CL:0000219,3.12e-12,386;CL:0000625,7.76e-12,11;CL:0000084,8.98e-12,25;CL:0000827,8.98e-12,25;CL:0000094,1.17e-10,8;CL:0002393,2.40e-09,9;CL:0002397,2.40e-09,9;CL:0000451,5.19e-09,10;CL:0000048,1.52e-08,427;CL:0000034,1.64e-08,441;CL:0000624,3.93e-08,6;CL:0000236,5.17e-08,14;CL:0000723,5.19e-08,433;CL:0000990,8.07e-08,8;CL:0000081,4.28e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.87e-26;42!CL:0000790;5.91e-17;18!CL:0000049;1.51e-14;108!CL:0000051;7.29e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.92e-31!102;UBERON:0003061!7.92e-31!102;UBERON:0002193!2.41e-27!112;UBERON:0002371!1.11e-22!80;UBERON:0001474!3.73e-20!86;UBERON:0002405!2.36e-15!115;UBERON:0004765!3.16e-14!101;UBERON:0001434!3.16e-14!101;UBERON:0007023!4.71e-10!115;UBERON:0000178!5.37e-08!15;UBERON:0000179!5.37e-08!15;UBERON:0000463!5.37e-08!15;UBERON:0002384!6.31e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-10;15!UBERON:0000179;1.90e-10;15!UBERON:0000463;1.90e-10;15!UBERON:0002390;6.80e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.62e-48,98;UBERON:0003061,2.62e-48,98;UBERON:0002193,2.48e-44,108;UBERON:0002371,9.50e-36,76;UBERON:0002405,1.22e-34,93;UBERON:0001474,1.30e-31,82;UBERON:0004765,5.41e-27,90;UBERON:0001434,2.57e-22,100;UBERON:0003081,3.53e-15,203;UBERON:0002384,8.97e-15,371;UBERON:0000178,1.84e-10,15;UBERON:0000179,1.84e-10,15;UBERON:0000463,1.84e-10,15;UBERON:0002204,3.82e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.547497700291537,0,0.382067028739756,0.821005894499457,0.157421562627358,31.8625064247612,18.8076405067634,18.423118674613,0,0,0,0.92960640696362,0.710846162437108,22.3136333894484,16.6198622559563,19.2522669571336,18.0119022694157,13.4349284543955,10.3645973126073,14.6818073551486,37.6581438439073,25.695564170839,27.1694148530354,13.0160260667183,9.45686142450199,10.2203102395384,9.49384894663097,14.6011602721587,10.1687358852092,14.8240642716746,18.0735711403471,25.7310324529249,16.7535682192918,9.5517152520246,6.51698104890745,16.2224462956578,9.9487998393589,9.59005688698562,25.3985501143771,26.3292028060554,24.2948107803636,6.67481248845743,5.10646702222026,3.73693349397345,10.80369260604,16.1659704710262,9.77349801173025,6.65939452896706,4.78760926783834,6.0127853613768,17.5341887638912,22.3234514963296,16.3533743496533,61.2191039748398,53.3127969587347,39.6992199141788,11.9705352371324,16.3111675303254,10.5945209183488,12.3197371122926,8.7382177801941,13.3426388079533,9.81479511902967,9.20910770182829,8.62128659931725,12.5598525829124,7.63243003628291,13.6611112586268,8.80855784056408,8.02773779062981,38.3296852879175,10.0891541336676,11.8522838148785,33.2439511492378,23.1876350022007,27.5506008659342,53.1653055342356,64.2066865268173,65.3357971913932,62.3445530905316,40.2191749355477,47.7261570109236,45.1929144950587,36.5585216082771,40.3487657135877,37.3270327496851,37.9851559634492,28.7404018497282,38.543810402762,67.4703862387375,69.2930744752357,70.0388009493344,26.1744581631378,42.1542542962113,43.2970581308114,39.2180522630229,41.4135038621326,23.4390043388311,26.6126572445545,18.2195894084105,15.9983263943023,28.7340671070395,32.6752607820743,16.4225599384209,15.1205057418549,9.89528724398977,19.6961189280607,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,1.57174890597255,0,0,22.3937701621732,23.5075145354011,16.752703025377,7.3932093534656,9.72391348326217,2.60020250930695,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,110.695550646293,73.6782501881818,0,0,0,0,0,1.41867352879343,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.190254152234598,1.58040879591855,0,16.4965394078556,4.68008530278475,7.8774516013026,0,0,0,0,0,0,0,0.880484340132261,1.24396869324463,0.432359860250884,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,4.86495122564762,15.0677127429638,10.5416969741516,0,0,0,0.144781306667579,0,0,0,12.4129378927214,7.54696512008311,13.6043618456533,0,1.30139853857622,0,0,0,79.3947445384013,92.7400523532477,84.9551802543873,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,25.0189311608694,31.2785591186994,24.8675209682025,0,0,0.604780586659361,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,1.46139224653261,0,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0,1.31555925987561,0.784306353074702,0,0.328014645699706,0,2.06082023295445,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0.670302275535787,0,2.16530741786592,0,0,0,0,28.9245137262337,34.4086743214069,73.484487145467,51.4580634988824,51.8316464088605,23.9935125141305,11.8806916192385,60.2775133983645,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0.711418433484141,0.159426272728822,1.59663497146253,11.6818275780744,13.7587828770524,0.324621940274555,29.2029065237997,2.28234679033192,1.41011906195721,27.5697924799074,4.57087800064329,7.70822760497758,6.05399121573143,3.83261613921294,2.40453741329035,0.614481528616916,0.671028323677248,0.166849141711909,0.781552381608161,0.278406173895242,0,4.05683517713975,0,0,0.748562161632879,1.31857361344705,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0.659215496907038,0.422250816255987,1.19548792950642,15.1956153542131,0,0.102268682502155,0.123084805461069,0,0,0,2.55786185113436,1.57829449019094,23.948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0.442317039724898,0,0,0,0,1.00035336054936,0,0,0,0.217294743844016,0,0.274792780205587,1.06606955203727,0,2.82564461511045,1.163481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| ||
|short_description=p2@TACC3 | |||
}} | }} |
Latest revision as of 18:38, 16 September 2015
Short description: | p2@TACC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TACC3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_AK304579, AK310660_5end |
EntrezGene: | TACC3 |
HGNC: | 11524 |
UniProt: | B4E355 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.62e-48 | 98 |
blood island | 2.62e-48 | 98 |
hemolymphoid system | 2.48e-44 | 108 |
bone marrow | 9.50e-36 | 76 |
immune system | 1.22e-34 | 93 |
bone element | 1.30e-31 | 82 |
skeletal element | 5.41e-27 | 90 |
skeletal system | 2.57e-22 | 100 |
lateral plate mesoderm | 3.53e-15 | 203 |
connective tissue | 8.97e-15 | 371 |
blood | 1.84e-10 | 15 |
haemolymphatic fluid | 1.84e-10 | 15 |
organism substance | 1.84e-10 | 15 |
musculoskeletal system | 3.82e-08 | 167 |