FFCP PHASE1:Hg19::chr6:22146824..22146837,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:22146824..22146837,+ to FFCP PHASE1:Hg19::chr6:22146824..22146837,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401237 | |EntrezGene=401237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28245 | |HGNC=28245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_uc003ndn.2_5end | |||
|cluster_id=chr6:22146824..22146837,+ | |||
|description=CAGE_peak_5_at_LINC00340_5end | |||
|id=chr6:22146824..22146837,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.41e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.01e-33!82;UBERON:0000073!2.65e-33!94;UBERON:0001016!2.65e-33!94;UBERON:0005743!1.36e-32!86;UBERON:0001049!2.15e-32!57;UBERON:0005068!2.15e-32!57;UBERON:0006241!2.15e-32!57;UBERON:0007135!2.15e-32!57;UBERON:0000955!1.85e-29!69;UBERON:0006238!1.85e-29!69;UBERON:0002780!2.78e-27!41;UBERON:0001890!2.78e-27!41;UBERON:0006240!2.78e-27!41;UBERON:0002616!5.32e-27!59;UBERON:0003080!2.55e-26!42;UBERON:0002020!1.36e-24!34;UBERON:0003528!1.36e-24!34;UBERON:0001893!1.49e-24!34;UBERON:0007023!1.57e-24!115;UBERON:0002791!1.48e-23!33;UBERON:0003075!4.14e-23!86;UBERON:0007284!4.14e-23!86;UBERON:0001869!1.10e-22!32;UBERON:0000153!1.02e-21!129;UBERON:0007811!1.02e-21!129;UBERON:0002346!2.98e-21!90;UBERON:0004121!1.54e-20!169;UBERON:0000033!4.47e-20!123;UBERON:0000924!1.79e-19!173;UBERON:0006601!1.79e-19!173;UBERON:0003056!1.21e-18!61;UBERON:0000956!3.22e-18!25;UBERON:0000203!3.22e-18!25;UBERON:0002619!4.70e-16!22;UBERON:0001950!3.12e-14!20;UBERON:0004111!5.34e-10!241;UBERON:0000477!7.16e-10!286;UBERON:0000025!7.80e-09!194;UBERON:0002420!7.87e-08!9;UBERON:0007245!7.87e-08!9;UBERON:0010009!7.87e-08!9;UBERON:0010011!7.87e-08!9;UBERON:0000454!7.87e-08!9;UBERON:0002308!8.10e-08!9;UBERON:0000125!8.10e-08!9;UBERON:0001871!1.59e-07!7;UBERON:0000475!1.68e-07!365;UBERON:0003076!2.38e-07!15;UBERON:0003057!2.38e-07!15;UBERON:0002298!6.77e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.91e-28;22!UBERON:0001950;4.99e-26;20!UBERON:0000956;3.42e-24;25!UBERON:0000203;3.42e-24;25!UBERON:0001869;5.30e-22;32!UBERON:0001893;1.02e-21;34!UBERON:0003528;5.35e-21;34!UBERON:0002020;5.35e-21;34!UBERON:0002780;1.21e-20;41!UBERON:0001890;1.21e-20;41!UBERON:0002791;8.34e-19;32!UBERON:0000073;3.13e-15;53!UBERON:0002616;3.13e-15;53!UBERON:0002021;1.71e-13;5!UBERON:0001016;4.44e-13;83!UBERON:0000988;4.61e-13;3!UBERON:0001017;6.35e-13;75!UBERON:0000955;2.15e-11;68!UBERON:0001897;2.83e-09;2!UBERON:0002148;2.83e-09;2!UBERON:0005162;2.83e-09;2!UBERON:0000122;2.83e-09;2!UBERON:0006331;2.83e-09;2!UBERON:0009662;2.83e-09;2!UBERON:0010225;2.83e-09;2!UBERON:0011216;9.58e-07;132!UBERON:0000200;9.59e-07;6!UBERON:0002298;9.59e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-32,56;UBERON:0005068,1.53e-32,56;UBERON:0006241,1.53e-32,56;UBERON:0007135,1.53e-32,56;UBERON:0001016,3.99e-31,89;UBERON:0000073,1.51e-28,53;UBERON:0002616,1.51e-28,53;UBERON:0000955,3.07e-28,68;UBERON:0006238,3.07e-28,68;UBERON:0002619,9.72e-28,22;UBERON:0002780,1.51e-27,41;UBERON:0001890,1.51e-27,41;UBERON:0003080,1.51e-27,41;UBERON:0006240,1.51e-27,41;UBERON:0001017,2.40e-27,81;UBERON:0003528,2.25e-26,34;UBERON:0002020,2.25e-26,34;UBERON:0001893,2.69e-26,34;UBERON:0001950,3.30e-26,20;UBERON:0001869,1.02e-24,32;UBERON:0000956,3.36e-24,25;UBERON:0000203,3.36e-24,25;UBERON:0003075,1.06e-22,82;UBERON:0007284,1.06e-22,82;UBERON:0002791,1.77e-21,32;UBERON:0002346,2.16e-21,86;UBERON:0003056,1.79e-19,61;UBERON:0011216,6.67e-17,223;UBERON:0010371,9.72e-17,104;UBERON:0004121,1.39e-15,171;UBERON:0000924,1.39e-15,171;UBERON:0006601,1.39e-15,171;UBERON:0010314,1.24e-14,132;UBERON:0002021,9.68e-14,5;UBERON:0007023,1.66e-13,114;UBERON:0000988,6.56e-13,3;UBERON:0001897,1.09e-09,2;UBERON:0010225,1.09e-09,2;UBERON:0004111,3.30e-09,240;UBERON:0005162,6.04e-09,2;UBERON:0000122,6.04e-09,2;UBERON:0002148,7.71e-09,2;UBERON:0006331,7.71e-09,2;UBERON:0009662,7.71e-09,2;UBERON:0000025,1.89e-07,192 | |||
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| ||
|short_description=p5@LINC00340 | |||
}} | }} |
Latest revision as of 04:31, 17 September 2015
Short description: | p5@LINC00340 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LINC00340_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_uc003ndn.2_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data