FFCP PHASE1:Hg19::chrX:152772312..152772340,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:152772312..152772340,- to FFCP PHASE1:Hg19::chrX:152772312..152772340,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:152772312..152772340,- | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_at_chrX:152772312..152772340,- | |||
|id=chrX:152772312..152772340,- | |||
|ontology_enrichment_celltype=CL:0000055!3.67e-29!180;CL:0000222!2.85e-17!119;CL:0000057!1.23e-15!75;CL:0000680!2.26e-15!57;CL:0000056!2.26e-15!57;CL:0000355!2.26e-15!57;CL:0000187!6.39e-15!54;CL:0000183!1.08e-14!59;CL:0000359!5.02e-14!32;CL:0000393!1.77e-13!60;CL:0000211!1.77e-13!60;CL:0000192!6.67e-12!42;CL:0000514!6.67e-12!42;CL:0002494!2.79e-08!16;CL:0000327!1.34e-07!14;CL:0002139!1.46e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.11e-18;32!CL:0000327;1.92e-12;15!CL:0000192;1.08e-10;43!CL:0002620;3.86e-09;23!CL:0000499;7.74e-09;28!CL:0000057;3.29e-07;73!CL:0002494;3.39e-07;16!CL:0000393;4.53e-07;61!CL:0000211;4.53e-07;61!CL:0000187;6.29e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.16e-19,32;CL:0000057,1.81e-17,76;CL:0000192,1.17e-13,43;CL:0000514,1.17e-13,43;CL:0000187,1.35e-13,55;CL:0000327,1.43e-12,15;CL:0000680,1.80e-12,58;CL:0000056,1.80e-12,58;CL:0000355,1.80e-12,58;CL:0000393,1.82e-11,61;CL:0000211,1.82e-11,61;CL:0000222,3.03e-10,121;CL:0002620,3.77e-09,23;CL:0000048,5.02e-09,427;CL:0000499,6.50e-09,28;CL:0000723,1.41e-08,433;CL:0000034,5.26e-08,441;CL:0002494,4.11e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.08e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;6.42e-07;5!DOID:450;6.42e-07;5!DOID:66;6.42e-07;5!DOID:423;6.42e-07;5!DOID:0080000;6.42e-07;5!DOID:11722;6.42e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.28e-07,5;DOID:450,5.28e-07,5;DOID:66,5.28e-07,5;DOID:423,5.28e-07,5;DOID:0080000,5.28e-07,5;DOID:11722,5.28e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.33e-26!79;UBERON:0007798!6.33e-26!79;UBERON:0004872!2.89e-25!84;UBERON:0001009!2.83e-23!113;UBERON:0004535!4.55e-23!110;UBERON:0000055!1.06e-22!69;UBERON:0001981!7.89e-21!60;UBERON:0007500!7.89e-21!60;UBERON:0004537!7.89e-21!60;UBERON:0006965!7.89e-21!60;UBERON:0001637!1.50e-19!42;UBERON:0003509!1.50e-19!42;UBERON:0004572!1.50e-19!42;UBERON:0003914!3.18e-18!118;UBERON:0004573!5.24e-15!33;UBERON:0004571!5.24e-15!33;UBERON:0001134!6.33e-15!61;UBERON:0002036!6.33e-15!61;UBERON:0003082!6.33e-15!61;UBERON:0002385!1.43e-14!63;UBERON:0001015!1.43e-14!63;UBERON:0000383!1.43e-14!63;UBERON:0004290!1.90e-12!70;UBERON:0000914!2.57e-12!83;UBERON:0002329!2.57e-12!83;UBERON:0003077!2.57e-12!83;UBERON:0003059!2.57e-12!83;UBERON:0007282!2.57e-12!83;UBERON:0009618!2.57e-12!83;UBERON:0007285!2.57e-12!83;UBERON:0000948!3.15e-11!24;UBERON:0005498!3.15e-11!24;UBERON:0004140!3.15e-11!24;UBERON:0009881!3.15e-11!24;UBERON:0004141!3.15e-11!24;UBERON:0003084!3.15e-11!24;UBERON:0007005!3.15e-11!24;UBERON:0004139!3.15e-11!24;UBERON:0004291!3.15e-11!24;UBERON:0007100!4.46e-11!27;UBERON:0000477!4.99e-11!286;UBERON:0000490!2.73e-10!138;UBERON:0000486!8.33e-10!82;UBERON:0000025!1.40e-09!194;UBERON:0004111!1.67e-09!241;UBERON:0005256!1.49e-08!143;UBERON:0000119!2.30e-08!312;UBERON:0000947!5.01e-08!21;UBERON:0010191!5.01e-08!21;UBERON:0000483!1.37e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.72e-19;42!UBERON:0003509;6.72e-19;42!UBERON:0004572;6.72e-19;42!UBERON:0004573;4.20e-18;33!UBERON:0004571;4.20e-18;33!UBERON:0000947;1.04e-10;21!UBERON:0010191;1.04e-10;21!UBERON:0007500;9.03e-10;56!UBERON:0001981;9.03e-10;56!UBERON:0004537;9.03e-10;56!UBERON:0000055;2.09e-08;65!UBERON:0000948;2.82e-08;22!UBERON:0007100;4.78e-08;25!UBERON:0004905;5.45e-08;8!UBERON:0000982;5.45e-08;8!UBERON:0004770;5.45e-08;8!UBERON:0002049;2.26e-07;75!UBERON:0007798;2.26e-07;75!UBERON:0004535;5.01e-07;109!UBERON:0011135;6.42e-07;5!UBERON:0002216;6.42e-07;5!UBERON:0011134;6.42e-07;5!UBERON:0002209;6.42e-07;5!UBERON:0002213;6.42e-07;5!UBERON:0007844;6.42e-07;5!UBERON:0011138;6.42e-07;5!UBERON:0001130;6.42e-07;5!UBERON:0001066;6.42e-07;5!UBERON:0001468;6.42e-07;5!UBERON:0003914;9.72e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.29e-24,42;UBERON:0003509,2.29e-24,42;UBERON:0004572,2.29e-24,42;UBERON:0002049,4.28e-21,78;UBERON:0007798,4.28e-21,78;UBERON:0004872,6.81e-21,83;UBERON:0004573,1.56e-20,33;UBERON:0004571,1.56e-20,33;UBERON:0007500,6.56e-20,59;UBERON:0001981,6.56e-20,59;UBERON:0004537,6.56e-20,59;UBERON:0006965,6.56e-20,59;UBERON:0000055,9.51e-20,68;UBERON:0001009,2.66e-19,112;UBERON:0004535,3.27e-19,109;UBERON:0003914,2.13e-15,117;UBERON:0001134,3.88e-12,62;UBERON:0002036,3.88e-12,62;UBERON:0003082,3.88e-12,62;UBERON:0002385,1.68e-11,64;UBERON:0001015,1.68e-11,64;UBERON:0000383,1.68e-11,64;UBERON:0007503,2.59e-11,78;UBERON:0000947,6.05e-11,21;UBERON:0010191,6.05e-11,21;UBERON:0007524,7.95e-11,73;UBERON:0002329,1.82e-10,71;UBERON:0003059,1.82e-10,71;UBERON:0007282,1.82e-10,71;UBERON:0004290,1.82e-10,71;UBERON:0009618,1.82e-10,71;UBERON:0003077,3.29e-10,72;UBERON:0007285,3.29e-10,72;UBERON:0000948,3.47e-10,24;UBERON:0005498,3.47e-10,24;UBERON:0004140,3.47e-10,24;UBERON:0009881,3.47e-10,24;UBERON:0004141,3.47e-10,24;UBERON:0003084,3.47e-10,24;UBERON:0007005,3.47e-10,24;UBERON:0004139,3.47e-10,24;UBERON:0004291,3.47e-10,24;UBERON:0007100,6.49e-10,27;UBERON:0000486,2.05e-09,83;UBERON:0004905,4.05e-08,8;UBERON:0000982,4.05e-08,8;UBERON:0004770,4.05e-08,8;UBERON:0003498,2.27e-07,5;UBERON:0005985,2.27e-07,5;UBERON:0003104,3.54e-07,160;UBERON:0009142,3.54e-07,160;UBERON:0011135,5.65e-07,5;UBERON:0002216,5.65e-07,5;UBERON:0011134,5.65e-07,5;UBERON:0002209,5.65e-07,5;UBERON:0002213,5.65e-07,5;UBERON:0005856,5.65e-07,5;UBERON:0005866,5.65e-07,5;UBERON:0005863,5.65e-07,5;UBERON:0007844,5.65e-07,5;UBERON:0011138,5.65e-07,5;UBERON:0001130,5.65e-07,5;UBERON:0001066,5.65e-07,5;UBERON:0001468,5.65e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,1.8564952944007,1.32558950291166,1.34465029290355,1.80808358407193,2.19093027116212,1.95173119516203,0.492484232307152,1.63200552995402,0.626909442956176,0.286235987131057,0.136874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,9.03597880961416,5.51471701699479,4.63508860674636,0.795285947051099,28.2248224775529,0,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,1.38856200643038,2.26123176769604,0.419499436209906,0.825354125820202,1.25396979922086,0.775250277507987,0.35576626268671,0.66944122552934,0.402829317109147,0,2.68468263302986,0.735326160691737,3.24056779152704,0.535798369704479,0.22452937262617,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0,7.45457927542978,6.07826455989983,0.529636723252875,9.46560848471085,1.41867352879343,1.12135520028461,7.47242970107935,5.18001851676036,0.311211035399766,2.69421344139376,1.14423332179421,5.60022482286246,9.21881479167998,0.468642863667593,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,1.23633464639278,0,0.718618141816238,0,0.125118519871964,0,0,0.30648779579902,0.751190294532984,1.81491493056034,1.79389635688862,1.92201649936711,2.33125091275518,3.30100205692843,1.03052529238439,2.06112432036503,1.67505170698431,4.05063197379039,4.28722822709274,1.51460264546469,2.20919756741518,2.10139873864455,3.55009592516614,0.906768884048762,1.3564847384839,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,2.94017422771084,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0.977424915930974,0,0,0,0.587043471179108,1.44366447761074,2.77791307545966,3.23432058798817,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,1.30788020649984,2.4935017179123,1.42198887333556,10.7296933755565,0.845302752556,0.797814349754612,0,0.771622122786426,0,0.532844358032199,0.285955987316295,2.71310802695722,0,1.30294473717494,0,0.791951872933429,0,0,0.099972991182057,0,0,0,6.23024624278115,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,2.69921281782108,3.50119364741774,1.08506009479894,15.1818728917489,9.8135943838439,9.93525214713788,5.38850508966481,2.70851489754947,0,3.10419213877515,3.98535359121262,3.31864503375066,0.260650843404249,13.1186775500036,11.6668764095691,0,0,0,0,0,0.30239029332968,0.248107807818777,2.76231551918512,3.92924132206303,0.512556597022804,2.04682899626681,4.18220194973379,1.48418066444991,0.771048469013278,2.13074070375753,0.9033987161519,0,0.581051892299796,0.120859449591622,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,1.13733384070897,0,1.0795795805107,9.25363516141736,0,0,0.254876273045038,0,0,0,0,0,0,0,0.824328093181778,0,0.082509499920588,0,0,0,3.19013370364003,0.770243085573222,0.614014698904518,0.137836572484531,0.859361958946189,1.45016693914229,0.767039646744908,10.1496520637281,0,0,0,0,0,2.83331112147576,0,3.69640296211307,1.59691809095107,0,6.30102344953328,0.143124886741991,4.09374206295634,2.53103539774981,0.190630193923825,0.255897791311334,0.42793898803392,1.90921948755562,5.49464048139461,0.359744915166629,0,0,2.22400729730648,3.17020642346017,1.26377536871694,0,2.43713489631284,6.33900880540533,0.272999822815972,0,3.39024349860728,2.2054613741845,0.66343897524122,4.82295973779139,0.578775534266688,0,1.01455188481352,3.40805847909725,3.94373843545138,0,0.491245205065606,0.35667105148125,1.06428319221179,2.74439925886963,2.63435914367922,0.75894634753143,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,1.47787785689595,17.5338229660941,0.276283915531148,0,0,0,2.48831670129446,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0.108647371922008,2.55200927785536,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,0,0,2.14834370736859,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.67569440763353,0.916641696046735,2.87149209830726,0.199679000498991,1.71690419254628,0,0.268733889946905,2.16179930125442,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.104909176269996,0,0,0,3.57347663186684,0,0,0,0,0.326587360109409,0,0,0,2.03961764736226,0.439656701034247,0,0,0.39669780522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| ||
|short_description=p@chrX:152772312..152772340,- | |||
}} | }} |
Latest revision as of 06:46, 1 August 2015
Short description: | p@chrX:152772312..152772340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:152772312..152772340, - |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.16e-19 | 32 |
fibroblast | 1.81e-17 | 76 |
smooth muscle cell | 1.17e-13 | 43 |
smooth muscle myoblast | 1.17e-13 | 43 |
muscle cell | 1.35e-13 | 55 |
extracellular matrix secreting cell | 1.43e-12 | 15 |
muscle precursor cell | 1.80e-12 | 58 |
myoblast | 1.80e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-12 | 58 |
electrically responsive cell | 1.82e-11 | 61 |
electrically active cell | 1.82e-11 | 61 |
mesodermal cell | 3.03e-10 | 121 |
skin fibroblast | 3.77e-09 | 23 |
multi fate stem cell | 5.02e-09 | 427 |
stromal cell | 6.50e-09 | 28 |
somatic stem cell | 1.41e-08 | 433 |
stem cell | 5.26e-08 | 441 |
cardiocyte | 4.11e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.28e-07 | 5 |
myotonic disease | 5.28e-07 | 5 |
muscle tissue disease | 5.28e-07 | 5 |
myopathy | 5.28e-07 | 5 |
muscular disease | 5.28e-07 | 5 |
myotonic dystrophy | 5.28e-07 | 5 |