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FFCP PHASE1:Mm9::chr16:89818603..89818642,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:89818603..89818642,-
|DHSsupport=NA
|short_description=p10@Tiam1
|DPIdataset=NA
|description=CAGE_peak_10_at_Tiam1_5end
|association_with_transcript=-6bp_to_ENSMUST00000133684,ENSMUST00000164263,NM_001145887,uc007zvs.2_5end
|EntrezGene=21844
|EntrezGene=21844
|HGNC=
|HGNC=
|MCL_coexpression_id=189
|TSSclassifier=NA
|UniProt=E9Q1R7,Q3UHH6,Q3UVX2,Q6P1D6
|UniProt=E9Q1R7,Q3UHH6,Q3UVX2,Q6P1D6
|association_with_transcript=-6bp_to_ENSMUST00000133684,ENSMUST00000164263,NM_001145887,uc007zvs.2_5end
|cluster_id=chr16:89818603..89818642,-
|description=CAGE_peak_10_at_Tiam1_5end
|id=chr16:89818603..89818642,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,1.68e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!2.73e-11!114;UBERON:0002346!2.75e-10!71;UBERON:0003075!2.75e-10!71;UBERON:0007284!2.75e-10!71;UBERON:0004111!4.91e-10!122;UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0000033!3.63e-09!63;UBERON:0001017!1.84e-08!73;UBERON:0005743!1.84e-08!73;UBERON:0000073!2.36e-08!75;UBERON:0001016!2.36e-08!75;UBERON:0001049!2.58e-08!52;UBERON:0005068!2.58e-08!52;UBERON:0006241!2.58e-08!52;UBERON:0007135!2.58e-08!52;UBERON:0000955!6.78e-08!50;UBERON:0006238!6.78e-08!50;UBERON:0002616!7.26e-08!49;UBERON:0003056!1.05e-07!49;UBERON:0002048!1.57e-07!14;UBERON:0000117!1.57e-07!14;UBERON:0000171!1.57e-07!14;UBERON:0000170!1.57e-07!14;UBERON:0005597!1.57e-07!14;UBERON:0000118!1.57e-07!14;UBERON:0000475!1.61e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.68e-14,10;UBERON:0000411,2.68e-14,10;UBERON:0001950,2.68e-14,10;UBERON:0000073,3.24e-13,54;UBERON:0004111,4.42e-12,122;UBERON:0000025,1.76e-11,114;UBERON:0001017,2.58e-10,73;UBERON:0001016,7.12e-10,75;UBERON:0001049,1.46e-09,52;UBERON:0005068,1.46e-09,52;UBERON:0006241,1.46e-09,52;UBERON:0007135,1.46e-09,52;UBERON:0010371,5.32e-09,73;UBERON:0002346,7.30e-09,64;UBERON:0003075,7.30e-09,64;UBERON:0007284,7.30e-09,64;UBERON:0004121,3.51e-08,95;UBERON:0000924,3.51e-08,95;UBERON:0006601,3.51e-08,95;UBERON:0002048,3.52e-08,14;UBERON:0000117,3.52e-08,14;UBERON:0000171,3.52e-08,14;UBERON:0000170,3.52e-08,14;UBERON:0005597,3.52e-08,14;UBERON:0000118,3.52e-08,14;UBERON:0002020,8.70e-08,34;UBERON:0002619,1.18e-07,17;UBERON:0002780,1.32e-07,39;UBERON:0001890,1.32e-07,39;UBERON:0006240,1.32e-07,39;UBERON:0004684,1.68e-07,3;UBERON:0002275,1.68e-07,3;UBERON:0010314,1.89e-07,92;UBERON:0000956,2.46e-07,21;UBERON:0001869,2.46e-07,21;UBERON:0000203,2.46e-07,21;UBERON:0003080,2.49e-07,40;UBERON:0000483,3.05e-07,174;UBERON:0000119,4.65e-07,176;UBERON:0002616,8.31e-07,46;UBERON:0005157,8.38e-07,20
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0,2.57085885963423,1.76694832761291,0.122490799214954,0.479227355091182,0.919218786610021,5.50579404996943,8.81042632787795,5.52983519722476,0.131886287730194,0.823388792421687,0,0.837548997004143,0,0.61119299110724,1.17851434189467,1.85083185038834,0.372798891650601,0.302904773332736,0.0755715601067855,3.76823835312181,2.58127163094416,0,0,0.649776417447669,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.915001205637253,0.125654352112864,3.12883776346098,2.55715457330331,7.89594569326328,4.2182728397617,0,0.373220911830279,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,1.26043490863744,0.452114453507145,0.544291993210623,0.384341160854549,0.281105173679186,0.517406741478031,0.862271971731369,0.567318240503458,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0,1.19420560091096,0,0,0,0.828503090142008,1.87620847984877,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.930135779001631,0.536546802799238,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0.515469845288373,0,0.667134131534611,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0.569003702859245,0.114248512609729,1.1270773567308,0.814605311381257,1.35766741017338,0.280543279561274,0.69560190836683,0.885660887877613,0.31399745568275,0.123397163921801,0.889357881261447,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,0,0.324270453550071,0,4.31304619582064,1.48856379067401,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,0.739012760666419,0.947457058852424,0.162964976442026,0.848725428875941,0.938760993154008,3.1826188913945,1.6663054862021,0.390267295715598,2.20689201748667,3.5434350343804,4.78364305972461,5.89907932976657,5.00786447411097,4.33947175744535,0,0,0,0,0.642202359951168,1.05490517932983,0,1.51482556322624,0.631016438832513,0,6.03185513651837,0,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,1.24138163549592,1.42695054081656,1.15184314421485,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.477489376012546,0.492422699235184,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.756037385752609,0.418176592028937,0.218362563746178,0.674321731924103,0.330613822901344,0,0.259229946583586,0,0,1.79419855252775,0.66183396182839,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.25984164595559,0.537080087002444,0,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0,2.30162618253588,1.71868654031819,1.03111909406213,3.42541259885321,3.0215755895588,2.70009000092722,2.70192721934532,5.43770890781046,4.14208249401456,0.518936737920883,0,0.682934423016537,0.729320151204882,0,0,0,0,0.320919209591815,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,0.512201219238954,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.726732083161643,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0.927471342481686
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.622137673850866,0,0,2.57085885963423,1.76694832761291,0.122490799214954,0.479227355091182,0.919218786610021,5.50579404996943,8.81042632787795,5.52983519722476,0.131886287730194,0.823388792421687,0,0.837548997004143,0,0.61119299110724,1.17851434189467,1.85083185038834,0.372798891650601,0.302904773332736,0.0755715601067855,3.76823835312181,2.58127163094416,0,0,0.649776417447669,0,0.702222100658759,0,0,0,7.60554466794075,0,0,0,0,0,0,0.11418387971906,0,0.890652834388949,0.173485326766136,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,0.599162557619291,0.915001205637253,0.125654352112864,3.12883776346098,2.55715457330331,7.89594569326328,4.2182728397617,0,0.373220911830279,0.252722758433675,0.420883711772948,0.260240885925407,0.459804208866946,1.26043490863744,0.452114453507145,0.544291993210623,0.384341160854549,0.281105173679186,0.517406741478031,0.862271971731369,0.567318240503458,0.351902248327898,0.657587197282725,0.834141747676794,0.348252166522167,0,1.19420560091096,0,0,0,0.828503090142008,1.87620847984877,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.930135779001631,0.536546802799238,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0.411618449517138,0,0,0.213288250535234,0,0.515469845288373,0,0.667134131534611,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0.58489226135736,0,0.216138049874694,0.199141273254367,0.569003702859245,0.114248512609729,1.1270773567308,0.814605311381257,1.35766741017338,0.280543279561274,0.69560190836683,0.885660887877613,0.31399745568275,0.123397163921801,0.889357881261447,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,0,0.324270453550071,0,4.31304619582064,1.48856379067401,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,0.739012760666419,0.947457058852424,0.162964976442026,0.848725428875941,0.938760993154008,3.1826188913945,1.6663054862021,0.390267295715598,2.20689201748667,3.5434350343804,4.78364305972461,5.89907932976657,5.00786447411097,4.33947175744535,0,0,0,0,0.642202359951168,1.05490517932983,0,1.51482556322624,0.631016438832513,0,6.03185513651837,0,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,1.24138163549592,1.42695054081656,1.15184314421485,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.301564624640779,0.477489376012546,0.492422699235184,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.756037385752609,0.418176592028937,0.218362563746178,0.674321731924103,0.330613822901344,0,0.259229946583586,0,0,1.79419855252775,0.66183396182839,0.388902376688095,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.25984164595559,0.537080087002444,0,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0,0,0,0,0,0,0,0,2.30162618253588,1.71868654031819,1.03111909406213,3.42541259885321,3.0215755895588,2.70009000092722,2.70192721934532,5.43770890781046,4.14208249401456,0.518936737920883,0,0.682934423016537,0.729320151204882,0,0,0,0,0.320919209591815,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,0.512201219238954,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0,0.726732083161643,0.470546902076653,0.169229215783353,0.548783918618318,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.214871054048298,0.57386499620653,0.441182838239031,0.927471342481686
|short_description=p10@Tiam1
}}
}}

Latest revision as of 19:50, 25 September 2015

Short description:p10@Tiam1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Tiam1_5end
Coexpression cluster:MCL_coexpression_mm9:189
Association with transcript: -6bp_to_ENSMUST00000133684, ENSMUST00000164263, NM_001145887, uc007zvs.2_5end
EntrezGene:Tiam1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Tiam1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F27.90
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.68e-073

Uber anatomy
Ontology termp-valuen
occipital lobe2.68e-1410
visual cortex2.68e-1410
neocortex2.68e-1410
regional part of nervous system3.24e-1354
anatomical conduit4.42e-12122
tube1.76e-11114
central nervous system2.58e-1073
nervous system7.12e-1075
neural tube1.46e-0952
neural rod1.46e-0952
future spinal cord1.46e-0952
neural keel1.46e-0952
ecto-epithelium5.32e-0973
neurectoderm7.30e-0964
neural plate7.30e-0964
presumptive neural plate7.30e-0964
ectoderm-derived structure3.51e-0895
ectoderm3.51e-0895
presumptive ectoderm3.51e-0895
lung3.52e-0814
respiratory tube3.52e-0814
respiration organ3.52e-0814
pair of lungs3.52e-0814
lung primordium3.52e-0814
lung bud3.52e-0814
gray matter8.70e-0834
regional part of cerebral cortex1.18e-0717
regional part of forebrain1.32e-0739
forebrain1.32e-0739
future forebrain1.32e-0739
raphe nuclei1.68e-073
reticular formation1.68e-073
structure with developmental contribution from neural crest1.89e-0792
cerebral cortex2.46e-0721
cerebral hemisphere2.46e-0721
pallium2.46e-0721
anterior neural tube2.49e-0740
epithelium3.05e-07174
cell layer4.65e-07176
regional part of brain8.31e-0746
epithelial fold8.38e-0720
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