FFCP PHASE1:Mm9::chr1:162723329..162723342,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:162723329..162723342,- to FFCP PHASE1:Mm9::chr1:162723329..162723342,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=29809 | |EntrezGene=29809 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=A6H6A9 | |UniProt=A6H6A9 | ||
|association_with_transcript=-260bp_to_ENSMUST00000028048,ENSMUST00000028049,NM_013862,uc007dej.2,uc007dek.1_5end | |||
|cluster_id=chr1:162723329..162723342,- | |||
|description=CAGE_peak_14_at_Rabgap1l_5end | |||
|id=chr1:162723329..162723342,- | |||
|ontology_enrichment_celltype=CL:0000791!3.72e-14!9;CL:0000789!3.72e-14!9;CL:0002420!3.72e-14!9;CL:0002419!3.72e-14!9;CL:0000790!3.72e-14!9;CL:0002031!4.16e-14!25;CL:0000988!5.73e-13!32;CL:0002032!5.73e-13!32;CL:0000037!5.73e-13!32;CL:0000566!5.73e-13!32;CL:0000837!5.73e-13!32;CL:0000624!6.91e-13!8;CL:0000838!1.02e-12!12;CL:0000542!1.55e-11!13;CL:0000051!1.55e-11!13;CL:0000084!3.60e-11!11;CL:0000827!3.60e-11!11;CL:0000553!2.13e-10!6;CL:0000556!2.13e-10!6;CL:0000893!9.28e-10!6;CL:0002489!9.28e-10!6;CL:0000898!9.28e-10!6;CL:0000809!9.28e-10!6;CL:0000810!9.28e-10!6;CL:0000895!9.28e-10!6;CL:0000808!9.28e-10!6;CL:0000894!9.28e-10!6;CL:0000806!9.28e-10!6;CL:0000807!9.28e-10!6;CL:0000805!9.28e-10!6;CL:0002425!9.28e-10!6;CL:0002436!9.28e-10!6;CL:0002427!9.28e-10!6;CL:0002428!9.28e-10!6;CL:0002429!9.28e-10!6;CL:0002433!9.28e-10!6;CL:0002431!9.28e-10!6;CL:0002432!9.28e-10!6;CL:0000738!3.22e-08!17;CL:0002087!3.22e-08!17;CL:0002320!1.78e-07!46;CL:0000134!1.78e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.10e-31,25;CL:0000624,2.46e-25,8;CL:0000988,2.71e-24,32;CL:0002032,2.71e-24,32;CL:0000037,2.71e-24,32;CL:0000837,2.71e-24,32;CL:0000838,3.20e-24,12;CL:0000791,1.53e-22,9;CL:0000789,1.53e-22,9;CL:0002420,1.53e-22,9;CL:0002419,1.53e-22,9;CL:0000790,1.53e-22,9;CL:0000542,2.35e-22,13;CL:0000051,2.35e-22,13;CL:0000553,4.51e-21,6;CL:0000556,4.51e-21,6;CL:0000084,1.78e-18,11;CL:0000827,1.78e-18,11;CL:0000738,4.43e-17,17;CL:0002087,4.43e-17,17;CL:0002320,1.01e-16,46;CL:0000134,1.01e-16,46;CL:0000050,3.46e-14,9;CL:0000219,3.77e-14,54;CL:0000893,6.34e-13,6;CL:0002489,6.34e-13,6;CL:0000898,6.34e-13,6;CL:0000809,6.34e-13,6;CL:0000810,6.34e-13,6;CL:0000895,6.34e-13,6;CL:0000808,6.34e-13,6;CL:0000894,6.34e-13,6;CL:0000806,6.34e-13,6;CL:0000807,6.34e-13,6;CL:0000805,6.34e-13,6;CL:0002425,6.34e-13,6;CL:0002436,6.34e-13,6;CL:0002427,6.34e-13,6;CL:0002428,6.34e-13,6;CL:0002429,6.34e-13,6;CL:0002433,6.34e-13,6;CL:0002431,6.34e-13,6;CL:0002432,6.34e-13,6;CL:0000839,6.30e-10,13;CL:0000945,1.19e-09,1;CL:0000236,1.19e-09,1;CL:0000826,1.19e-09,1;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000763,4.04e-08,16;CL:0000723,4.33e-08,91;CL:0000048,4.33e-08,91;CL:0000034,1.55e-07,97;CL:0000049,7.07e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.12e-13!48;UBERON:0002390!2.41e-11!45;UBERON:0003061!2.41e-11!45;UBERON:0002405!2.22e-09!70;UBERON:0004177!3.29e-08!29;UBERON:0002384!1.78e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.01e-16,46;UBERON:0002193,3.82e-10,48;UBERON:0002405,3.82e-10,48;UBERON:0000029,2.09e-09,1;UBERON:0001097,2.09e-09,1;UBERON:0003968,2.09e-09,1;UBERON:0001467,2.09e-09,1;UBERON:0002390,2.56e-08,45;UBERON:0003061,2.56e-08,45;UBERON:0002371,4.04e-08,16 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,1.16210991097419,20.9775196005983,3.27690336850791,1.54096171402954,0.478632953972018,0.342401459862411,0.0874204024189974,0.333109761815663,1.01237633694913,0.699561878128147,1.89277299214943,1.09691546884591,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.86569557567435,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.410082683163076,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,1.16210991097419,20.9775196005983,3.27690336850791,1.54096171402954,0.478632953972018,0.342401459862411,0.0874204024189974,0.333109761815663,1.01237633694913,0.699561878128147,1.89277299214943,1.09691546884591,1.27316895539409,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.86569557567435,2.90144856804538,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07150306917737,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.683483523191411,0,0,0.188368457004691,0.410082683163076,0.228778173206523,0.509935289981566,0.419854356970974,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p14@Rabgap1l | |||
}} | }} |
Latest revision as of 15:44, 26 September 2015
Short description: | p14@Rabgap1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Rabgap1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -260bp_to_ENSMUST00000028048, ENSMUST00000028049, NM_013862, uc007dej.2, uc007dek.1_5end |
EntrezGene: | Rabgap1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.01e-16 | 46 |
hemolymphoid system | 3.82e-10 | 48 |
immune system | 3.82e-10 | 48 |
lymph node | 2.09e-09 | 1 |
axillary lymph node | 2.09e-09 | 1 |
peripheral lymph node | 2.09e-09 | 1 |
shoulder | 2.09e-09 | 1 |
hematopoietic system | 2.56e-08 | 45 |
blood island | 2.56e-08 | 45 |
bone marrow | 4.04e-08 | 16 |