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(Created page with "{{f5samples |id=FF:11507-119G4 |name=Esophageal Epithelial Cells, donor1 |sample_id=11507 |rna_tube_id=119G4 |rna_box=119 |rna_position=G4 |sample_cell_lot=N/A |sample...")
 
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{{f5samples
{{f5samples
|id=FF:11507-119G4
|DRA_sample_Accession=CAGE@SAMD00005295
|name=Esophageal Epithelial Cells, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005295
|sample_id=11507
|accession_numbers=CAGE;DRX008237;DRR009109;DRZ000534;DRZ001919;DRZ011884;DRZ013269
|rna_tube_id=119G4
|accession_numbers_RNASeq=sRNA-Seq;DRX037166;DRR041532;DRZ007174
|rna_box=119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001043,UBERON:0002100,UBERON:0001007,UBERON:0004119,UBERON:0011216,UBERON:0000466,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004921,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0005178,UBERON:0005177,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0001555,UBERON:0001041,UBERON:0002224,UBERON:0000915
|rna_position=G4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000255,CL:0002076,CL:0002251,CL:0002252
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=lot:4602
|rna_catalog_number=SC2705
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=esophagus
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.90000
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=esophageal epithelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=1.34000
|sample_note=
|profile_hcage=,LSID768,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10011,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000144,CL:0000220,CL:0000223,CL:0000255,CL:0000548,CL:0002076,CL:0002251,CL:0002252,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001007,UBERON:0001041,UBERON:0001043,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0007026,UBERON:0009142,UBERON:0009143
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000056
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:209979467..209979494,-!p1@IRF6!2.47!331.00!IRF6;;chr17:7493405..7493419,-!p1@SOX15!2.37!235.93!SOX15;;chr1:209979411..209979433,-!p2@IRF6!2.18!150.02!IRF6;;chr1:6479968..6479986,-!p1@HES2!2.10!123.85!HES2;;chr3:189507432..189507459,+!p1@TP63!2.01!102.48!TP63;;chr6:10415276..10415341,-!p2@TFAP2A!1.89!92.02!TFAP2A;;chr5:134369905..134369972,-!p1@PITX1!1.86!106.41!PITX1;;chr4:57547454..57547469,-!p1@HOPX!1.80!61.93!HOPX;;chr12:54785074..54785122,-!p2@ZNF385A!1.79!92.02!ZNF385A;;chr17:7492684..7492778,-!p2@SOX15!1.77!118.62!SOX15;;chr17:80797886..80797906,-!p1@ZNF750!1.76!56.69!ZNF750;;chr5:134369879..134369898,-!p2@PITX1!1.70!49.28!PITX1;;chr14:37131058..37131139,+!p1@PAX9!1.70!48.84!PAX9;;chr12:54785054..54785072,-!p4@ZNF385A!1.66!50.59!ZNF385A;;chr22:19748231..19748317,+!p1@TBX1!1.59!37.94!TBX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.58!60.62!TFAP2A;;chr5:2751762..2751784,-!p1@IRX2!1.55!34.89!IRX2;;chr5:2751785..2751808,-!p2@IRX2!1.55!34.45!IRX2;;chr11:34642612..34642646,+!p1@EHF!1.54!33.58!EHF;;chr1:24645832..24645853,+!p1@GRHL3!1.52!32.27!GRHL3;;chr13:73633131..73633149,+!p1@KLF5!1.45!278.66!KLF5;;chr11:129245526..129245553,+!p1@BARX2!1.45!27.04!BARX2;;chr15:83953397..83953425,-!p1@BNC1!1.42!28.78!BNC1;;chr8:10588010..10588030,-!p1@SOX7!1.37!22.68!SOX7;;chr1:24645921..24645973,+!p2@GRHL3!1.31!19.62!GRHL3;;chr19:45908292..45908374,-!p1@PPP1R13L!1.30!163.10!PPP1R13L;;chr6:34524093..34524135,-!p1@SPDEF!1.26!17.01!SPDEF;;chr8:128748308..128748324,+!p2@MYC!1.25!457.90!MYC;;chr2:46524897..46524911,+!p2@EPAS1!1.19!40.12!EPAS1;;chr3:111314186..111314204,-!p1@ZBED2!1.19!14.39!ZBED2;;chr11:65554528..65554546,+!p1@OVOL1!1.17!13.96!OVOL1;;chr6:10415484..10415508,-!p3@TFAP2A!1.14!12.65!TFAP2A;;chr8:102504651..102504683,+!p1@GRHL2!1.14!12.65!GRHL2;;chr12:53614115..53614154,-!p1@RARG!1.12!64.98!RARG;;chr17:26833339..26833378,+!p1@FOXN1!1.12!12.21!FOXN1;;chr20:55204351..55204377,+!p1@TFAP2C!1.10!14.83!TFAP2C;;chr6:10419768..10419819,-!p6@TFAP2A!1.08!10.90!TFAP2A;;chr1:209979375..209979386,-!p4@IRF6!1.06!10.47!IRF6;;chr1:209979449..209979460,-!p3@IRF6!1.06!10.47!IRF6;;chr15:101069113..101069169,-!p1@CERS3!1.04!10.03!CERS3;;chr2:122042770..122042785,-!p1@TFCP2L1!1.04!10.03!TFCP2L1;;chr3:189507460..189507471,+!p3@TP63!1.04!10.03!TP63;;chr6:10412576..10412599,-!p5@TFAP2A!1.04!10.03!TFAP2A;;chr6:10413188..10413249,-!p7@TFAP2A!1.04!10.03!TFAP2A;;chr6:1312325..1312340,+!p1@FOXQ1!1.03!16.14!FOXQ1;;chr12:66218255..66218304,+!p3@HMGA2!1.01!25.29!HMGA2;;chr5:3595977..3595999,+!p1@IRX1!1.01!9.16!IRX1;;chr5:3595934..3595957,+!p2@IRX1!0.99!8.72!IRX1;;chr5:3595961..3595975,+!p3@IRX1!0.99!8.72!IRX1;;chr1:2461692..2461710,-!p1@HES5!0.97!8.29!HES5;;chr12:53625966..53626012,-!p2@RARG!0.96!21.80!RARG;;chr2:45236540..45236577,-!p1@SIX2!0.95!7.85!SIX2;;chr2:63277948..63277974,+!p1@OTX1!0.95!7.85!OTX1;;chr3:181429704..181429722,+!p1@SOX2!0.92!7.41!SOX2;;chr1:201979743..201979762,+!p1@ELF3!0.92!7.41!ELF3;;chr5:1887070..1887114,-!p1@IRX4!0.92!7.41!IRX4;;chr2:60778035..60778060,-!p4@BCL11A!0.91!8.72!BCL11A;;chr20:18038521..18038571,-!p1@OVOL2!0.90!6.98!OVOL2;;chr17:48072574..48072597,-!p1@DLX3!0.90!6.98!DLX3;;chr14:38064429..38064486,-!p1@FOXA1!0.90!6.98!FOXA1;;chr11:47236584..47236679,+!p1@DDB2!0.89!77.19!DDB2;;chr11:129245736..129245758,+!p2@BARX2!0.88!6.54!BARX2;;chr17:8027418..8027432,-!p1@HES7!0.88!6.54!HES7;;chr8:49833948..49833973,-!p2@SNAI2!0.87!42.74!SNAI2;;chr22:42229246..42229270,+!p2@SREBF2!0.86!82.86!SREBF2;;chr17:38465441..38465481,+!p6@RARA!0.86!7.85!RARA;;chr1:8938709..8938720,-!p3@ENO1!0.85!310.50!ENO1;;chr1:10856694..10856715,-!p3@CASZ1!0.85!6.11!CASZ1;;chrY:21906594..21906622,-!p1@KDM5D!0.85!6.11!KDM5D;;chr22:42229210..42229229,+!p3@SREBF2!0.84!14.39!SREBF2;;chr2:85360499..85360598,+!p1@TCF7L1!0.83!34.89!TCF7L1;;chr8:49833978..49833996,-!p1@SNAI2!0.82!123.41!SNAI2;;chr5:1887052..1887065,-!p2@IRX4!0.82!5.67!IRX4;;chr14:21566731..21566836,-!p1@ZNF219!0.80!61.05!ZNF219;;chr17:38465413..38465438,+!p5@RARA!0.80!8.72!RARA;;chr21:40177845..40177863,+!p1@ETS2!0.79!337.10!ETS2;;chr1:154975258..154975330,+!p1@ZBTB7B!0.79!20.50!ZBTB7B;;chr2:10091815..10091864,+!p1@GRHL1!0.79!6.98!GRHL1;;chr17:80797863..80797874,-!p2@ZNF750!0.79!5.23!ZNF750;;chr19:45908278..45908282,-!p5@PPP1R13L!0.79!5.23!PPP1R13L;;chr1:154975229..154975247,+!p6@ZBTB7B!0.79!5.23!ZBTB7B;;chr20:22565185..22565223,-!p3@FOXA2!0.79!5.23!FOXA2;;chr11:113930291..113930339,+!p2@ZBTB16!0.77!8.29!ZBTB16;;chr11:65687362..65687436,+!p3@DRAP1!0.76!23.55!DRAP1;;chr1:40367530..40367597,-!p1@MYCL1!0.76!9.16!MYCL1;;chr1:8926441..8926473,-!p10@ENO1!0.76!7.41!ENO1;;chr20:22565370..22565388,-!p2@FOXA2!0.76!4.80!FOXA2;;chr11:65554563..65554576,+!p2@OVOL1!0.76!4.80!OVOL1;;chr15:67391010..67391046,+!p13@SMAD3!0.76!4.80!SMAD3;;chr6:10419824..10419840,-!p9@TFAP2A!0.76!4.80!TFAP2A;;chr3:193853927..193853944,+!p1@HES1!0.75!169.20!HES1;;chr16:54964740..54964789,+!p1@IRX5!0.75!6.98!IRX5;;chr8:48650715..48650735,-!p1@CEBPD!0.74!648.47!CEBPD;;chr1:37940170..37940190,+!p1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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000223;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002251;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001007;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001043;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005181
|ffid_belonging_in_development=CL:0000223
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Esophageal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11323.11507-119G4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Esophageal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11323.11507-119G4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Esophageal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11323.11507-119G4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Esophageal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11323.11507-119G4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Esophageal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11323.11507-119G4.hg38.nobarcode.ctss.bed.gz
|id=FF:11507-119G4
|is_a=EFO:0002091;;FF:0000056
|is_obsolete=
|library_id=CNhs11323
|library_id_phase_based=2:CNhs11323
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11507
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10011.TGACCA.11507
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11507
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10011.TGACCA.11507
|name=Esophageal Epithelial Cells, donor1
|namespace=FANTOM5
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|profile_cagescan=,,,
|profile_hcage=CNhs11323,LSID768,release014,COMPLETED
|profile_rnaseq=
|profile_srnaseq=SRhi10011,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=119
|rna_catalog_number=SC2705
|rna_concentration=1.34
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=lot:4602
|rna_od260/230=
|rna_od260/280=
|rna_position=G4
|rna_rin=9.9
|rna_sample_type=total RNA
|rna_tube_id=119G4
|rna_weight_ug=10
|rnaseq_library_id=SRhi10011.TGACCA
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=esophageal epithelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.28252607327287e-207!GO:0005737;cytoplasm;3.65323814819331e-191!GO:0043226;organelle;2.22927995231106e-156!GO:0043229;intracellular organelle;5.05692502667608e-156!GO:0043231;intracellular membrane-bound organelle;6.111150462716e-145!GO:0043227;membrane-bound organelle;1.44850740174969e-144!GO:0044444;cytoplasmic part;5.05010414532279e-131!GO:0044422;organelle part;6.15420436026468e-123!GO:0044446;intracellular organelle part;6.04954784090556e-122!GO:0032991;macromolecular complex;1.58491740410986e-77!GO:0030529;ribonucleoprotein complex;5.42450303706661e-73!GO:0005739;mitochondrion;1.94594226125063e-72!GO:0044237;cellular metabolic process;7.6490255196093e-72!GO:0044238;primary metabolic process;2.12951887901759e-71!GO:0005515;protein binding;4.32362703641743e-65!GO:0043170;macromolecule metabolic process;3.40306685029175e-59!GO:0043233;organelle lumen;4.79571755726638e-57!GO:0031974;membrane-enclosed lumen;4.79571755726638e-57!GO:0005840;ribosome;2.44315385005284e-54!GO:0009058;biosynthetic process;1.69896712670807e-49!GO:0031090;organelle membrane;2.75162200512623e-49!GO:0003735;structural constituent of ribosome;2.98426952854937e-49!GO:0044429;mitochondrial part;4.32710014606477e-49!GO:0006412;translation;6.26303891952564e-49!GO:0019538;protein metabolic process;5.78649711352889e-48!GO:0044428;nuclear part;1.83010843956166e-46!GO:0044249;cellular biosynthetic process;1.83010843956166e-46!GO:0003723;RNA binding;1.87452713236845e-46!GO:0005634;nucleus;5.89871511157502e-42!GO:0033279;ribosomal subunit;9.4388789468366e-42!GO:0044260;cellular macromolecule metabolic process;9.80859691152958e-42!GO:0044267;cellular protein metabolic process;1.41968642933139e-41!GO:0009059;macromolecule biosynthetic process;1.61183719365188e-39!GO:0043234;protein complex;2.00161781079913e-38!GO:0005829;cytosol;6.88568348592596e-38!GO:0031967;organelle envelope;1.05824673475998e-37!GO:0031975;envelope;2.46396421781342e-37!GO:0016043;cellular component organization and biogenesis;1.4244348055665e-36!GO:0015031;protein transport;2.75433102425936e-34!GO:0033036;macromolecule localization;5.76367467849814e-34!GO:0043228;non-membrane-bound organelle;2.75488656662637e-32!GO:0043232;intracellular non-membrane-bound organelle;2.75488656662637e-32!GO:0005740;mitochondrial envelope;4.36568599261254e-32!GO:0008104;protein localization;6.36653848576464e-32!GO:0045184;establishment of protein localization;3.39218997633563e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.12657495723698e-31!GO:0006396;RNA processing;7.60522355840576e-31!GO:0031966;mitochondrial membrane;1.40886452826992e-29!GO:0031981;nuclear lumen;1.79003776120101e-29!GO:0065003;macromolecular complex assembly;7.08699037757527e-29!GO:0019866;organelle inner membrane;6.54556402867184e-28!GO:0005743;mitochondrial inner membrane;9.86644620778129e-27!GO:0043283;biopolymer metabolic process;1.23003030158089e-26!GO:0006996;organelle organization and biogenesis;7.74633904997586e-26!GO:0046907;intracellular transport;8.27632706978753e-26!GO:0022607;cellular component assembly;1.24654990949279e-25!GO:0044445;cytosolic part;6.52335885172328e-25!GO:0016071;mRNA metabolic process;5.76558011688198e-24!GO:0010467;gene expression;1.3024487091776e-23!GO:0006886;intracellular protein transport;9.87229613777777e-23!GO:0008380;RNA splicing;3.52422860111855e-22!GO:0015935;small ribosomal subunit;1.09391453973607e-21!GO:0031980;mitochondrial lumen;3.35526274433069e-21!GO:0005759;mitochondrial matrix;3.35526274433069e-21!GO:0015934;large ribosomal subunit;4.37848542708027e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.1637913993781e-20!GO:0005783;endoplasmic reticulum;3.33975779077536e-20!GO:0006397;mRNA processing;3.38483890943271e-20!GO:0006119;oxidative phosphorylation;3.38867381996258e-20!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.53951137161148e-20!GO:0006259;DNA metabolic process;2.05811170846783e-19!GO:0044455;mitochondrial membrane part;2.32270965861655e-19!GO:0012505;endomembrane system;1.53267918443819e-18!GO:0005654;nucleoplasm;1.68482494897848e-17!GO:0051186;cofactor metabolic process;3.28048124765099e-17!GO:0044432;endoplasmic reticulum part;4.50574182970596e-17!GO:0005681;spliceosome;8.30932885344192e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.66737414829811e-16!GO:0048770;pigment granule;2.66737414829811e-16!GO:0042470;melanosome;2.66737414829811e-16!GO:0006457;protein folding;4.50373374959011e-16!GO:0016874;ligase activity;5.15883680949232e-16!GO:0005746;mitochondrial respiratory chain;7.16013891943998e-16!GO:0051641;cellular localization;1.52128039919653e-15!GO:0051649;establishment of cellular localization;1.77854163669852e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.7379067522909e-15!GO:0044451;nucleoplasm part;4.60252340143962e-15!GO:0007049;cell cycle;9.19697386772003e-15!GO:0012501;programmed cell death;9.71387397000209e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.26083046370655e-14!GO:0006915;apoptosis;1.46450326077133e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.5023504317921e-14!GO:0003954;NADH dehydrogenase activity;1.5023504317921e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.5023504317921e-14!GO:0005761;mitochondrial ribosome;1.55534462015766e-14!GO:0000313;organellar ribosome;1.55534462015766e-14!GO:0006732;coenzyme metabolic process;3.20891248526189e-14!GO:0005794;Golgi apparatus;6.47763060871934e-14!GO:0008134;transcription factor binding;8.67250644818831e-14!GO:0006605;protein targeting;3.40309954179701e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.6647987888079e-13!GO:0042773;ATP synthesis coupled electron transport;4.6647987888079e-13!GO:0008219;cell death;4.83668424510296e-13!GO:0016265;death;4.83668424510296e-13!GO:0044248;cellular catabolic process;4.93550772355326e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.90902449518225e-13!GO:0044265;cellular macromolecule catabolic process;6.36836312577024e-13!GO:0005789;endoplasmic reticulum membrane;7.2937724632524e-13!GO:0005730;nucleolus;7.44124878677006e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.91151002574105e-13!GO:0009057;macromolecule catabolic process;1.0819210375068e-12!GO:0016462;pyrophosphatase activity;1.1021999324279e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.10842144227413e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;1.14531526779515e-12!GO:0043412;biopolymer modification;1.29268459728187e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.35371057309642e-12!GO:0045271;respiratory chain complex I;1.35371057309642e-12!GO:0005747;mitochondrial respiratory chain complex I;1.35371057309642e-12!GO:0006512;ubiquitin cycle;1.42647994900341e-12!GO:0043285;biopolymer catabolic process;1.79912807304619e-12!GO:0022618;protein-RNA complex assembly;2.30672855900256e-12!GO:0000166;nucleotide binding;4.31061528121824e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.3375773082144e-12!GO:0017111;nucleoside-triphosphatase activity;6.54047540599797e-12!GO:0009055;electron carrier activity;8.41595670694997e-12!GO:0006464;protein modification process;1.42395108499152e-11!GO:0000502;proteasome complex (sensu Eukaryota);1.52137183599555e-11!GO:0051082;unfolded protein binding;3.56373326158991e-11!GO:0022402;cell cycle process;7.66436976718373e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;8.70666400434464e-11!GO:0043067;regulation of programmed cell death;9.4958775337238e-11!GO:0042981;regulation of apoptosis;1.07428380400677e-10!GO:0019941;modification-dependent protein catabolic process;1.24502094736591e-10!GO:0043632;modification-dependent macromolecule catabolic process;1.24502094736591e-10!GO:0044257;cellular protein catabolic process;1.54531296617684e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.60637958196996e-10!GO:0006511;ubiquitin-dependent protein catabolic process;1.72674294591398e-10!GO:0030163;protein catabolic process;2.0098864877663e-10!GO:0016491;oxidoreductase activity;2.33779661695787e-10!GO:0048193;Golgi vesicle transport;2.57857237732299e-10!GO:0006461;protein complex assembly;2.59115123803919e-10!GO:0008135;translation factor activity, nucleic acid binding;4.74149493981277e-10!GO:0043687;post-translational protein modification;7.2638031037493e-10!GO:0006323;DNA packaging;7.89159675251601e-10!GO:0051276;chromosome organization and biogenesis;1.94535779243841e-09!GO:0051188;cofactor biosynthetic process;1.98461351067161e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.98461351067161e-09!GO:0000375;RNA splicing, via transesterification reactions;1.98461351067161e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.98461351067161e-09!GO:0016192;vesicle-mediated transport;2.82557191162557e-09!GO:0000278;mitotic cell cycle;3.27564683920963e-09!GO:0000074;regulation of progression through cell cycle;4.34840416080869e-09!GO:0051726;regulation of cell cycle;6.08316118804286e-09!GO:0009056;catabolic process;1.05377757579579e-08!GO:0006163;purine nucleotide metabolic process;1.14896111018634e-08!GO:0048523;negative regulation of cellular process;1.39980188040744e-08!GO:0042254;ribosome biogenesis and assembly;1.42596135330292e-08!GO:0017076;purine nucleotide binding;1.49263712614373e-08!GO:0003712;transcription cofactor activity;1.54303127201129e-08!GO:0032553;ribonucleotide binding;1.64131983998446e-08!GO:0032555;purine ribonucleotide binding;1.64131983998446e-08!GO:0009259;ribonucleotide metabolic process;1.69833926133084e-08!GO:0005768;endosome;2.62707886377415e-08!GO:0005793;ER-Golgi intermediate compartment;2.93053850565573e-08!GO:0006913;nucleocytoplasmic transport;2.96396707680005e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.43814781893825e-08!GO:0009150;purine ribonucleotide metabolic process;3.53393488330213e-08!GO:0006399;tRNA metabolic process;3.89938185049052e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.76863346953407e-08!GO:0006164;purine nucleotide biosynthetic process;4.93185779606894e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.40531207437087e-08!GO:0051169;nuclear transport;5.48682475032463e-08!GO:0007005;mitochondrion organization and biogenesis;5.60297678974388e-08!GO:0006974;response to DNA damage stimulus;6.44409197114184e-08!GO:0009141;nucleoside triphosphate metabolic process;6.73764534889976e-08!GO:0017038;protein import;7.14674584451821e-08!GO:0006366;transcription from RNA polymerase II promoter;7.3864034047371e-08!GO:0000785;chromatin;8.61115204559107e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.71337261453636e-08!GO:0030532;small nuclear ribonucleoprotein complex;9.53465533273536e-08!GO:0048519;negative regulation of biological process;1.06272644415084e-07!GO:0009260;ribonucleotide biosynthetic process;1.10686520111877e-07!GO:0006413;translational initiation;1.31881185113112e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.46275418345904e-07!GO:0008639;small protein conjugating enzyme activity;1.46275418345904e-07!GO:0006333;chromatin assembly or disassembly;1.54964375186404e-07!GO:0003743;translation initiation factor activity;1.71335211974768e-07!GO:0043069;negative regulation of programmed cell death;1.86302703919471e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.12979120892754e-07!GO:0005635;nuclear envelope;2.15761105119848e-07!GO:0004842;ubiquitin-protein ligase activity;2.38738560052466e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.69784468568198e-07!GO:0009108;coenzyme biosynthetic process;3.04125395370497e-07!GO:0065004;protein-DNA complex assembly;3.10001404297773e-07!GO:0016604;nuclear body;3.19953720194339e-07!GO:0009142;nucleoside triphosphate biosynthetic process;3.41369567835104e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.41369567835104e-07!GO:0006446;regulation of translational initiation;3.41546712562262e-07!GO:0005694;chromosome;3.71446692702429e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.71446692702429e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.71446692702429e-07!GO:0044427;chromosomal part;3.75866854014624e-07!GO:0008565;protein transporter activity;3.99210507228225e-07!GO:0043066;negative regulation of apoptosis;4.19411157765426e-07!GO:0009060;aerobic respiration;4.19411157765426e-07!GO:0006916;anti-apoptosis;5.14314456354877e-07!GO:0016740;transferase activity;5.26275458821669e-07!GO:0019787;small conjugating protein ligase activity;5.76041212571073e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.11807280436596e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.11807280436596e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.17731831002652e-07!GO:0004812;aminoacyl-tRNA ligase activity;6.17731831002652e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.17731831002652e-07!GO:0009117;nucleotide metabolic process;6.4439028121651e-07!GO:0030120;vesicle coat;6.46507643415998e-07!GO:0030662;coated vesicle membrane;6.46507643415998e-07!GO:0016070;RNA metabolic process;7.20560702634576e-07!GO:0003676;nucleic acid binding;7.67428951809179e-07!GO:0015986;ATP synthesis coupled proton transport;8.83509574521779e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.83509574521779e-07!GO:0031497;chromatin assembly;8.83509574521779e-07!GO:0048475;coated membrane;9.19312995860876e-07!GO:0030117;membrane coat;9.19312995860876e-07!GO:0005524;ATP binding;1.15861732056134e-06!GO:0043038;amino acid activation;1.29258212990164e-06!GO:0006418;tRNA aminoacylation for protein translation;1.29258212990164e-06!GO:0043039;tRNA aminoacylation;1.29258212990164e-06!GO:0006334;nucleosome assembly;1.31509908899232e-06!GO:0032559;adenyl ribonucleotide binding;1.3433091339174e-06!GO:0030554;adenyl nucleotide binding;1.45847878544418e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.55556880096797e-06!GO:0016881;acid-amino acid ligase activity;2.14091459921945e-06!GO:0051246;regulation of protein metabolic process;2.14825144649903e-06!GO:0045333;cellular respiration;2.16162203670325e-06!GO:0009719;response to endogenous stimulus;2.16162203670325e-06!GO:0003924;GTPase activity;2.16708484543816e-06!GO:0045259;proton-transporting ATP synthase complex;2.19036880270935e-06!GO:0006752;group transfer coenzyme metabolic process;2.40635530633037e-06!GO:0044431;Golgi apparatus part;2.44056476035895e-06!GO:0031965;nuclear membrane;2.60730038238743e-06!GO:0019829;cation-transporting ATPase activity;3.23267273579148e-06!GO:0006091;generation of precursor metabolites and energy;3.74001232613708e-06!GO:0005773;vacuole;3.88803048923064e-06!GO:0006260;DNA replication;3.88803048923064e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.94270576107656e-06!GO:0006281;DNA repair;4.0534309364808e-06!GO:0046034;ATP metabolic process;4.30680417186912e-06!GO:0008654;phospholipid biosynthetic process;5.10596994533326e-06!GO:0065002;intracellular protein transport across a membrane;5.2467701928626e-06!GO:0044453;nuclear membrane part;5.5380014930388e-06!GO:0008610;lipid biosynthetic process;5.62416713300329e-06!GO:0006364;rRNA processing;6.18275909293198e-06!GO:0006754;ATP biosynthetic process;6.41534845361848e-06!GO:0006753;nucleoside phosphate metabolic process;6.41534845361848e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.60590380912481e-06!GO:0016072;rRNA metabolic process;8.53354192314405e-06!GO:0048522;positive regulation of cellular process;9.39167984066344e-06!GO:0005762;mitochondrial large ribosomal subunit;9.97937007208638e-06!GO:0000315;organellar large ribosomal subunit;9.97937007208638e-06!GO:0022403;cell cycle phase;1.08854786265245e-05!GO:0007067;mitosis;1.21766194910871e-05!GO:0000087;M phase of mitotic cell cycle;1.21766194910871e-05!GO:0031324;negative regulation of cellular metabolic process;1.32198743497738e-05!GO:0016607;nuclear speck;1.35407993286174e-05!GO:0006099;tricarboxylic acid cycle;1.40401779783604e-05!GO:0046356;acetyl-CoA catabolic process;1.40401779783604e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.47639480234752e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.48683237360389e-05!GO:0043623;cellular protein complex assembly;1.53082884433493e-05!GO:0032446;protein modification by small protein conjugation;1.85443922146163e-05!GO:0042623;ATPase activity, coupled;1.85719478020845e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.88446528952321e-05!GO:0016567;protein ubiquitination;1.89722855909338e-05!GO:0016568;chromatin modification;1.90875469720962e-05!GO:0006793;phosphorus metabolic process;2.4011325755925e-05!GO:0006796;phosphate metabolic process;2.4011325755925e-05!GO:0005788;endoplasmic reticulum lumen;2.46317541049334e-05!GO:0044440;endosomal part;2.46490768238445e-05!GO:0010008;endosome membrane;2.46490768238445e-05!GO:0000323;lytic vacuole;2.51172821162523e-05!GO:0005764;lysosome;2.51172821162523e-05!GO:0006084;acetyl-CoA metabolic process;2.52274634197989e-05!GO:0016787;hydrolase activity;2.77794371911334e-05!GO:0009109;coenzyme catabolic process;2.78420026463674e-05!GO:0042802;identical protein binding;2.89896681525969e-05!GO:0006888;ER to Golgi vesicle-mediated transport;3.03527595027697e-05!GO:0045786;negative regulation of progression through cell cycle;3.87474026134272e-05!GO:0016126;sterol biosynthetic process;3.9166852530789e-05!GO:0000139;Golgi membrane;3.96964260192051e-05!GO:0019843;rRNA binding;3.98499465037707e-05!GO:0051170;nuclear import;4.30808811366456e-05!GO:0006082;organic acid metabolic process;4.80375653616603e-05!GO:0016779;nucleotidyltransferase activity;5.05856137832931e-05!GO:0019752;carboxylic acid metabolic process;5.66559106471312e-05!GO:0016887;ATPase activity;6.15917874558146e-05!GO:0051187;cofactor catabolic process;6.3674854382318e-05!GO:0004298;threonine endopeptidase activity;6.81098197576697e-05!GO:0006606;protein import into nucleus;7.10296083502083e-05!GO:0016853;isomerase activity;7.51854682000795e-05!GO:0030176;integral to endoplasmic reticulum membrane;8.13595479305368e-05!GO:0045454;cell redox homeostasis;8.70366472227306e-05!GO:0005770;late endosome;8.71420438022432e-05!GO:0016564;transcription repressor activity;8.75781767630807e-05!GO:0016023;cytoplasmic membrane-bound vesicle;8.92187456338221e-05!GO:0005643;nuclear pore;9.00840650685741e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;9.01147169708809e-05!GO:0065009;regulation of a molecular function;9.68619222505422e-05!GO:0000245;spliceosome assembly;0.000107999807537993!GO:0031252;leading edge;0.00011423306200948!GO:0009892;negative regulation of metabolic process;0.000118954159291782!GO:0000314;organellar small ribosomal subunit;0.000137139672673979!GO:0005763;mitochondrial small ribosomal subunit;0.000137139672673979!GO:0005667;transcription factor complex;0.000137882008276979!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000147558432059393!GO:0003697;single-stranded DNA binding;0.000147618620893114!GO:0031988;membrane-bound vesicle;0.000149275291389156!GO:0005525;GTP binding;0.000159694315185081!GO:0003714;transcription corepressor activity;0.000164058233144128!GO:0016310;phosphorylation;0.000181393962040369!GO:0030118;clathrin coat;0.000188823893116529!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000196121461697948!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000204140361111585!GO:0043065;positive regulation of apoptosis;0.000227746128351852!GO:0009967;positive regulation of signal transduction;0.00023280933244668!GO:0005905;coated pit;0.000251351585186018!GO:0043068;positive regulation of programmed cell death;0.000276157464432697!GO:0016044;membrane organization and biogenesis;0.000323456424119532!GO:0000786;nucleosome;0.000323626357706801!GO:0003713;transcription coactivator activity;0.000328770668484682!GO:0051427;hormone receptor binding;0.000339855159223209!GO:0005769;early endosome;0.000346158164731334!GO:0016859;cis-trans isomerase activity;0.000349557481176527!GO:0003899;DNA-directed RNA polymerase activity;0.000349557481176527!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000357865977843758!GO:0016481;negative regulation of transcription;0.00038015267931407!GO:0048518;positive regulation of biological process;0.000389219684934272!GO:0030132;clathrin coat of coated pit;0.000390834653425077!GO:0006695;cholesterol biosynthetic process;0.000393317980826641!GO:0007264;small GTPase mediated signal transduction;0.000397566591339984!GO:0005798;Golgi-associated vesicle;0.000407931771807135!GO:0046474;glycerophospholipid biosynthetic process;0.000413266078005086!GO:0006979;response to oxidative stress;0.000419387444019917!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000420341146276432!GO:0030867;rough endoplasmic reticulum membrane;0.000439034285442737!GO:0033116;ER-Golgi intermediate compartment membrane;0.000451014783579557!GO:0050794;regulation of cellular process;0.00048275180133982!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000484372836104914!GO:0030119;AP-type membrane coat adaptor complex;0.000560190866139003!GO:0051329;interphase of mitotic cell cycle;0.000567386377951389!GO:0016563;transcription activator activity;0.000570616381600155!GO:0046930;pore complex;0.000596109188179241!GO:0035257;nuclear hormone receptor binding;0.000602417801390644!GO:0008250;oligosaccharyl transferase complex;0.000630253384432539!GO:0000279;M phase;0.000732372456584522!GO:0043681;protein import into mitochondrion;0.000773140661862393!GO:0044255;cellular lipid metabolic process;0.000806806206346624!GO:0050662;coenzyme binding;0.000819884509387765!GO:0031968;organelle outer membrane;0.000845341500853892!GO:0006839;mitochondrial transport;0.000867357070473178!GO:0048468;cell development;0.000883102621320282!GO:0019867;outer membrane;0.000942956093541339!GO:0044262;cellular carbohydrate metabolic process;0.000948160674453528!GO:0030131;clathrin adaptor complex;0.000976403783548165!GO:0019899;enzyme binding;0.000993664581297328!GO:0005741;mitochondrial outer membrane;0.00107137632356478!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00107332480431341!GO:0006626;protein targeting to mitochondrion;0.00108645753409161!GO:0051301;cell division;0.00110851186727039!GO:0015980;energy derivation by oxidation of organic compounds;0.00112393531503185!GO:0007006;mitochondrial membrane organization and biogenesis;0.00120353361610898!GO:0046489;phosphoinositide biosynthetic process;0.00124772291156299!GO:0051325;interphase;0.00130244351613065!GO:0030125;clathrin vesicle coat;0.0013101965683637!GO:0030665;clathrin coated vesicle membrane;0.0013101965683637!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00134700791364037!GO:0031982;vesicle;0.00136718608488916!GO:0043566;structure-specific DNA binding;0.0013797280632977!GO:0009165;nucleotide biosynthetic process;0.0013938136421601!GO:0030031;cell projection biogenesis;0.0014462024888469!GO:0051920;peroxiredoxin activity;0.00148001597088125!GO:0031410;cytoplasmic vesicle;0.00150888825596143!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00155884185942768!GO:0005791;rough endoplasmic reticulum;0.0015762989057149!GO:0043488;regulation of mRNA stability;0.00159450748081995!GO:0043487;regulation of RNA stability;0.00159450748081995!GO:0045893;positive regulation of transcription, DNA-dependent;0.0016719095766923!GO:0030036;actin cytoskeleton organization and biogenesis;0.00167301907727962!GO:0048471;perinuclear region of cytoplasm;0.00176372341847585!GO:0051789;response to protein stimulus;0.00176372341847585!GO:0006986;response to unfolded protein;0.00176372341847585!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00176372341847585!GO:0030133;transport vesicle;0.00177364516806117!GO:0030658;transport vesicle membrane;0.00184254760407956!GO:0048037;cofactor binding;0.00184586984044017!GO:0004386;helicase activity;0.00186087672385782!GO:0015630;microtubule cytoskeleton;0.00195093930622374!GO:0005048;signal sequence binding;0.00197960349823641!GO:0005885;Arp2/3 protein complex;0.00197960349823641!GO:0006066;alcohol metabolic process;0.00199357157691645!GO:0046467;membrane lipid biosynthetic process;0.00199832054548511!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00204085736217378!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0020827964074456!GO:0018196;peptidyl-asparagine modification;0.00213941918005555!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00213941918005555!GO:0032561;guanyl ribonucleotide binding;0.00215933817518326!GO:0019001;guanyl nucleotide binding;0.00215933817518326!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00215933817518326!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00215933817518326!GO:0050657;nucleic acid transport;0.00223412673010285!GO:0051236;establishment of RNA localization;0.00223412673010285!GO:0050658;RNA transport;0.00223412673010285!GO:0016125;sterol metabolic process;0.00229190200435197!GO:0006403;RNA localization;0.00237941008675832!GO:0008026;ATP-dependent helicase activity;0.00238889917659403!GO:0006613;cotranslational protein targeting to membrane;0.00250266898300723!GO:0015992;proton transport;0.00263202260421017!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00270794027337257!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00270794027337257!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00270794027337257!GO:0046483;heterocycle metabolic process;0.00274216789786476!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00289788647866401!GO:0006118;electron transport;0.0028983901255135!GO:0006520;amino acid metabolic process;0.00297756618117609!GO:0006818;hydrogen transport;0.00301410141641867!GO:0007243;protein kinase cascade;0.00309732239205141!GO:0043021;ribonucleoprotein binding;0.00335546616864361!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0034907348980677!GO:0008632;apoptotic program;0.00350036282081243!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00357074002156373!GO:0045941;positive regulation of transcription;0.00370767966363045!GO:0022890;inorganic cation transmembrane transporter activity;0.00371771424005559!GO:0008652;amino acid biosynthetic process;0.00384134778718015!GO:0030660;Golgi-associated vesicle membrane;0.00399914053752028!GO:0004576;oligosaccharyl transferase activity;0.00410643588519367!GO:0008361;regulation of cell size;0.00433255096583596!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00434120385151823!GO:0015399;primary active transmembrane transporter activity;0.00434120385151823!GO:0006650;glycerophospholipid metabolic process;0.00458536299814803!GO:0045892;negative regulation of transcription, DNA-dependent;0.00459374115065376!GO:0016049;cell growth;0.00463033688818843!GO:0008243;plasminogen activator activity;0.00463033688818843!GO:0050790;regulation of catalytic activity;0.00467261872337954!GO:0000151;ubiquitin ligase complex;0.00479951211139614!GO:0006917;induction of apoptosis;0.00514995092404616!GO:0006402;mRNA catabolic process;0.00522032776408088!GO:0006629;lipid metabolic process;0.0052803065941883!GO:0006414;translational elongation;0.00537635139287256!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0055365439460552!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00570372530049672!GO:0015002;heme-copper terminal oxidase activity;0.00570372530049672!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00570372530049672!GO:0004129;cytochrome-c oxidase activity;0.00570372530049672!GO:0008033;tRNA processing;0.00600382209761353!GO:0051252;regulation of RNA metabolic process;0.00612342754920563!GO:0051098;regulation of binding;0.00626651732540715!GO:0008629;induction of apoptosis by intracellular signals;0.00627044640700467!GO:0006740;NADPH regeneration;0.00636589278593364!GO:0006098;pentose-phosphate shunt;0.00636589278593364!GO:0008637;apoptotic mitochondrial changes;0.0064910184055981!GO:0017166;vinculin binding;0.00683082718515042!GO:0012502;induction of programmed cell death;0.00687207250314486!GO:0007010;cytoskeleton organization and biogenesis;0.00689910418581053!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00689969388830789!GO:0030384;phosphoinositide metabolic process;0.00707116837666361!GO:0006506;GPI anchor biosynthetic process;0.0070781864538054!GO:0030029;actin filament-based process;0.007294780346998!GO:0051287;NAD binding;0.00730658065578768!GO:0001558;regulation of cell growth;0.00769239373940229!GO:0006730;one-carbon compound metabolic process;0.00785446350865086!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.00818524866996614!GO:0005813;centrosome;0.00844580188882713!GO:0008092;cytoskeletal protein binding;0.00844580188882713!GO:0006505;GPI anchor metabolic process;0.00851375561670966!GO:0045926;negative regulation of growth;0.00851375561670966!GO:0006595;polyamine metabolic process;0.00851762755446906!GO:0005684;U2-dependent spliceosome;0.00857400483941952!GO:0006612;protein targeting to membrane;0.00860594194627526!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00872469643921307!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00872469643921307!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00888808682629598!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00919460921342403!GO:0051168;nuclear export;0.00932401953390335!GO:0001726;ruffle;0.00932401953390335!GO:0016272;prefoldin complex;0.00945172992489682!GO:0030880;RNA polymerase complex;0.00952045796502723!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00969845581227168!GO:0006749;glutathione metabolic process;0.0103600407721353!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0104039346147708!GO:0051101;regulation of DNA binding;0.0108464790119484!GO:0009116;nucleoside metabolic process;0.010907833957952!GO:0043154;negative regulation of caspase activity;0.0110151818155974!GO:0005774;vacuolar membrane;0.011071557549383!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0116195106197292!GO:0048487;beta-tubulin binding;0.0117066076592812!GO:0006779;porphyrin biosynthetic process;0.011909794605176!GO:0033014;tetrapyrrole biosynthetic process;0.011909794605176!GO:0006401;RNA catabolic process;0.0121887743723729!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0123683107842911!GO:0045792;negative regulation of cell size;0.0124599156186603!GO:0031301;integral to organelle membrane;0.0125478275293481!GO:0055092;sterol homeostasis;0.0126083181394325!GO:0042632;cholesterol homeostasis;0.0126083181394325!GO:0030308;negative regulation of cell growth;0.0126348127461461!GO:0031902;late endosome membrane;0.0128023555459592!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0128151953899287!GO:0006007;glucose catabolic process;0.0131929761564442!GO:0006767;water-soluble vitamin metabolic process;0.0132200275735275!GO:0001836;release of cytochrome c from mitochondria;0.0135530904293895!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0142368508052369!GO:0006643;membrane lipid metabolic process;0.0146027100155523!GO:0030145;manganese ion binding;0.0147171720829574!GO:0000096;sulfur amino acid metabolic process;0.0148680153476607!GO:0031072;heat shock protein binding;0.0149636659744155!GO:0006354;RNA elongation;0.0150958251137741!GO:0035035;histone acetyltransferase binding;0.0159336025539195!GO:0006509;membrane protein ectodomain proteolysis;0.0159939801109079!GO:0033619;membrane protein proteolysis;0.0159939801109079!GO:0051028;mRNA transport;0.0162034818204523!GO:0043284;biopolymer biosynthetic process;0.0162496607183697!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0166203900078891!GO:0006644;phospholipid metabolic process;0.0168630382579551!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0170824088954765!GO:0003724;RNA helicase activity;0.0171400487132103!GO:0006783;heme biosynthetic process;0.017179064366423!GO:0000049;tRNA binding;0.017179064366423!GO:0045334;clathrin-coated endocytic vesicle;0.017223196087212!GO:0006289;nucleotide-excision repair;0.0175403742709603!GO:0006778;porphyrin metabolic process;0.0179449366442544!GO:0033013;tetrapyrrole metabolic process;0.0179449366442544!GO:0031529;ruffle organization and biogenesis;0.0180158401497146!GO:0003711;transcription elongation regulator activity;0.0184086655618987!GO:0016197;endosome transport;0.0184621474972288!GO:0006891;intra-Golgi vesicle-mediated transport;0.0185417033238667!GO:0030128;clathrin coat of endocytic vesicle;0.0188914815077831!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0188914815077831!GO:0030122;AP-2 adaptor complex;0.0188914815077831!GO:0043492;ATPase activity, coupled to movement of substances;0.0189097198976168!GO:0003729;mRNA binding;0.0194032698978027!GO:0006739;NADP metabolic process;0.019596956794975!GO:0009112;nucleobase metabolic process;0.0196790297253274!GO:0005815;microtubule organizing center;0.0196790297253274!GO:0006733;oxidoreduction coenzyme metabolic process;0.0197447409326051!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0197934406362464!GO:0000428;DNA-directed RNA polymerase complex;0.0197934406362464!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0200916631507013!GO:0030027;lamellipodium;0.0202058778252479!GO:0007050;cell cycle arrest;0.0203630979292705!GO:0046822;regulation of nucleocytoplasmic transport;0.0205349683030738!GO:0008213;protein amino acid alkylation;0.0212793816794471!GO:0006479;protein amino acid methylation;0.0212793816794471!GO:0015631;tubulin binding;0.0213349577427743!GO:0050789;regulation of biological process;0.0213507117629735!GO:0005862;muscle thin filament tropomyosin;0.0214037375814384!GO:0007088;regulation of mitosis;0.0214230412321617!GO:0016363;nuclear matrix;0.0214230412321617!GO:0019318;hexose metabolic process;0.0214230412321617!GO:0006633;fatty acid biosynthetic process;0.0219555529692784!GO:0005996;monosaccharide metabolic process;0.0220327431727947!GO:0030833;regulation of actin filament polymerization;0.0225406788232167!GO:0016791;phosphoric monoester hydrolase activity;0.0225406788232167!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0228419919498771!GO:0005149;interleukin-1 receptor binding;0.0233069209069326!GO:0044437;vacuolar part;0.0233252936914667!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.023353190585526!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0233952282551725!GO:0051087;chaperone binding;0.0235455472542178!GO:0040008;regulation of growth;0.0235455472542178!GO:0006458;'de novo' protein folding;0.0238693567598322!GO:0051084;'de novo' posttranslational protein folding;0.0238693567598322!GO:0008139;nuclear localization sequence binding;0.0238693567598322!GO:0046983;protein dimerization activity;0.0243592830027394!GO:0008203;cholesterol metabolic process;0.0247595836192402!GO:0006950;response to stress;0.0250513993806455!GO:0048144;fibroblast proliferation;0.0250513993806455!GO:0048145;regulation of fibroblast proliferation;0.0250513993806455!GO:0030433;ER-associated protein catabolic process;0.0250513993806455!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0250513993806455!GO:0004680;casein kinase activity;0.0252015454458358!GO:0006519;amino acid and derivative metabolic process;0.0252981457233831!GO:0009119;ribonucleoside metabolic process;0.0256486072128282!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0260551987952391!GO:0010257;NADH dehydrogenase complex assembly;0.0260551987952391!GO:0033108;mitochondrial respiratory chain complex assembly;0.0260551987952391!GO:0006497;protein amino acid lipidation;0.0261141453155002!GO:0030503;regulation of cell redox homeostasis;0.0261799614412161!GO:0035258;steroid hormone receptor binding;0.0262292345591563!GO:0003684;damaged DNA binding;0.0271467866853978!GO:0000082;G1/S transition of mitotic cell cycle;0.0272246588138958!GO:0042168;heme metabolic process;0.0273626105718716!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0275659177881288!GO:0051540;metal cluster binding;0.028300321188119!GO:0051536;iron-sulfur cluster binding;0.028300321188119!GO:0030032;lamellipodium biogenesis;0.0283192752252421!GO:0005819;spindle;0.0284775470484072!GO:0005765;lysosomal membrane;0.028926428260442!GO:0008538;proteasome activator activity;0.0290846300652732!GO:0042158;lipoprotein biosynthetic process;0.0291687785021339!GO:0005856;cytoskeleton;0.0292924313764188!GO:0016717;oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water;0.0292924313764188!GO:0030659;cytoplasmic vesicle membrane;0.0292924313764188!GO:0045936;negative regulation of phosphate metabolic process;0.0294721922547208!GO:0044452;nucleolar part;0.0305804272605948!GO:0009303;rRNA transcription;0.0307540173567437!GO:0005869;dynactin complex;0.0307540173567437!GO:0006383;transcription from RNA polymerase III promoter;0.0308044402976859!GO:0007265;Ras protein signal transduction;0.0313242944103318!GO:0008283;cell proliferation;0.0313242944103318!GO:0032507;maintenance of cellular protein localization;0.0314236819345287!GO:0006611;protein export from nucleus;0.031960469764257!GO:0009166;nucleotide catabolic process;0.0321934953045336!GO:0030663;COPI coated vesicle membrane;0.0323883248983918!GO:0030126;COPI vesicle coat;0.0323883248983918!GO:0030041;actin filament polymerization;0.0329002868955075!GO:0043414;biopolymer methylation;0.0332145305443097!GO:0003756;protein disulfide isomerase activity;0.0337311108983659!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0337311108983659!GO:0016835;carbon-oxygen lyase activity;0.0337343064996208!GO:0051338;regulation of transferase activity;0.0339428503075303!GO:0040029;regulation of gene expression, epigenetic;0.0343573377075031!GO:0033559;unsaturated fatty acid metabolic process;0.0349526139922317!GO:0006636;unsaturated fatty acid biosynthetic process;0.0349526139922317!GO:0000209;protein polyubiquitination;0.0349608661621306!GO:0048146;positive regulation of fibroblast proliferation;0.0359240089901092!GO:0004674;protein serine/threonine kinase activity;0.0364609600264454!GO:0055088;lipid homeostasis;0.0371627936342589!GO:0008426;protein kinase C inhibitor activity;0.0372320580099439!GO:0008186;RNA-dependent ATPase activity;0.0376411510124992!GO:0030134;ER to Golgi transport vesicle;0.037731377661364!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0378408558867382!GO:0030508;thiol-disulfide exchange intermediate activity;0.038126669134717!GO:0006897;endocytosis;0.0381716224507477!GO:0010324;membrane invagination;0.0381716224507477!GO:0016741;transferase activity, transferring one-carbon groups;0.0383476896625398!GO:0008168;methyltransferase activity;0.0383476896625398!GO:0030137;COPI-coated vesicle;0.0396008269947941!GO:0006807;nitrogen compound metabolic process;0.0398396712483541!GO:0033673;negative regulation of kinase activity;0.0398396712483541!GO:0006469;negative regulation of protein kinase activity;0.0398396712483541!GO:0007040;lysosome organization and biogenesis;0.0398617082907199!GO:0006984;ER-nuclear signaling pathway;0.0400220249081371!GO:0006338;chromatin remodeling;0.0406320013305864!GO:0031272;regulation of pseudopodium formation;0.0406320013305864!GO:0031269;pseudopodium formation;0.0406320013305864!GO:0031344;regulation of cell projection organization and biogenesis;0.0406320013305864!GO:0031268;pseudopodium organization and biogenesis;0.0406320013305864!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0406320013305864!GO:0031274;positive regulation of pseudopodium formation;0.0406320013305864!GO:0006417;regulation of translation;0.0411015148361027!GO:0051059;NF-kappaB binding;0.041198483008349!GO:0046394;carboxylic acid biosynthetic process;0.0412892637458249!GO:0016053;organic acid biosynthetic process;0.0412892637458249!GO:0005758;mitochondrial intermembrane space;0.0416401444045245!GO:0044433;cytoplasmic vesicle part;0.0418898209132882!GO:0045806;negative regulation of endocytosis;0.0419925615075498!GO:0051128;regulation of cellular component organization and biogenesis;0.0424444118279297!GO:0051348;negative regulation of transferase activity;0.043414766589078!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0438050695895207!GO:0051085;chaperone cofactor-dependent protein folding;0.0448303472914905!GO:0030521;androgen receptor signaling pathway;0.046056480967436!GO:0004860;protein kinase inhibitor activity;0.0465151599482386!GO:0005637;nuclear inner membrane;0.0466269478647463!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0466269478647463!GO:0012510;trans-Golgi network transport vesicle membrane;0.0466269478647463!GO:0050178;phenylpyruvate tautomerase activity;0.0470262438348337!GO:0000118;histone deacetylase complex;0.0477454014727401!GO:0004177;aminopeptidase activity;0.0483596082238183!GO:0004681;casein kinase I activity;0.0489640900084983!GO:0030140;trans-Golgi network transport vesicle;0.0493757448737047!GO:0016783;sulfurtransferase activity;0.0497690428553386
|sample_id=11507
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=esophagus
|top_motifs=TP53:2.64185996292;TBX4,5:2.02474445227;SNAI1..3:1.96551805252;ZEB1:1.95281314181;VSX1,2:1.69766302396;ZNF423:1.69635219059;XCPE1{core}:1.63554626005;ZNF148:1.55107219694;HAND1,2:1.46191110765;MYOD1:1.43633567996;LMO2:1.27533355006;GTF2A1,2:1.25489703585;NR5A1,2:1.2405632945;TBP:1.20430149049;NKX2-3_NKX2-5:1.16155336249;TFCP2:1.15521939432;EBF1:1.15189046527;ONECUT1,2:1.01937280583;ADNP_IRX_SIX_ZHX:0.993469855703;PPARG:0.934609108183;NANOG:0.92158871748;TEAD1:0.87652342471;SP1:0.855319528402;ZIC1..3:0.818633794822;POU1F1:0.7804401713;GLI1..3:0.713183567727;HIF1A:0.7073367437;CEBPA,B_DDIT3:0.698011718916;POU2F1..3:0.676563916193;ZNF238:0.621735128742;CRX:0.619907842628;IKZF1:0.616571769811;TEF:0.609717107752;STAT5{A,B}:0.587696206142;TFAP2{A,C}:0.585865680947;FOS_FOS{B,L1}_JUN{B,D}:0.55504703362;PAX1,9:0.538432678535;MTF1:0.524257080073;RREB1:0.505882114119;FOXM1:0.469927447597;bHLH_family:0.459804604629;EP300:0.451439397796;GZF1:0.439365617266;HOX{A5,B5}:0.407501419623;BACH2:0.389354928542;FOSL2:0.381676360169;LHX3,4:0.370658579008;HES1:0.368898976322;GFI1B:0.314795209355;SMAD1..7,9:0.298555093199;TLX1..3_NFIC{dimer}:0.297073429914;NR1H4:0.290218651802;PBX1:0.286538469834;TFAP4:0.285167367006;GCM1,2:0.267449591039;ZBTB6:0.264032598088;AR:0.255288843898;HLF:0.244152723319;FOXQ1:0.238694836949;NR6A1:0.205888065067;NKX2-2,8:0.176299863367;POU6F1:0.158921784059;HNF4A_NR2F1,2:0.135531210973;FOXL1:0.119361676737;PDX1:0.0998895742156;HMX1:0.0953085870938;RXR{A,B,G}:0.0806535157076;NFIL3:0.0773730661019;NKX3-2:0.056784180408;CDC5L:0.0562248999909;RXRA_VDR{dimer}:0.0476881503773;HOX{A4,D4}:0.0139218622426;HIC1:0.0129030780407;SOX17:0.00716447467937;SOX{8,9,10}:0.00442593228149;PAX5:-0.0112959857667;HNF1A:-0.0135250515419;ESR1:-0.0435721320176;NFE2:-0.0560830176708;MAZ:-0.0776412746992;OCT4_SOX2{dimer}:-0.0844717255265;ARID5B:-0.0845151047061;REST:-0.0880907042621;PITX1..3:-0.0916368474327;T:-0.0936261176505;LEF1_TCF7_TCF7L1,2:-0.102285733795;NR3C1:-0.115142831067;TOPORS:-0.116363174795;GTF2I:-0.158125792413;SOX2:-0.166681393514;FOX{F1,F2,J1}:-0.169813125432;NFKB1_REL_RELA:-0.170749280242;POU5F1:-0.177507293502;POU3F1..4:-0.189858004759;KLF4:-0.194579731451;NFIX:-0.20534754018;UFEwm:-0.209762701863;MED-1{core}:-0.225406895809;NFE2L2:-0.226360839279;FOX{I1,J2}:-0.228977718892;NFY{A,B,C}:-0.251731884565;STAT2,4,6:-0.252153748377;GATA6:-0.257942934981;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.268641344756;RBPJ:-0.275677388158;NKX2-1,4:-0.292205324028;PAX4:-0.29883755974;HOX{A6,A7,B6,B7}:-0.32002835754;TFAP2B:-0.328464200264;MEF2{A,B,C,D}:-0.356498853944;ETS1,2:-0.362825991164;SRF:-0.371779387033;ZNF384:-0.380716649019;SOX5:-0.39435748924;ZNF143:-0.414338827632;TFDP1:-0.414613127783;ESRRA:-0.42863515134;TAL1_TCF{3,4,12}:-0.433048414751;SPIB:-0.439246563913;GFI1:-0.444024878643;NHLH1,2:-0.457299412383;JUN:-0.459873934126;PAX8:-0.508591430401;SPZ1:-0.510596062211;RUNX1..3:-0.51591207319;E2F1..5:-0.519041885426;MYBL2:-0.55807021973;RFX1:-0.560509768701;ALX4:-0.565880244722;CUX2:-0.580601034856;RORA:-0.582010155179;DBP:-0.584156699816;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.592456972263;MYB:-0.60138153147;PAX2:-0.64271014437;FOXA2:-0.655517705506;IRF7:-0.66204383135;ATF2:-0.675624579532;EGR1..3:-0.676832225637;PATZ1:-0.689538803615;HSF1,2:-0.711022630536;SPI1:-0.732050767815;FOXO1,3,4:-0.760140950756;RFX2..5_RFXANK_RFXAP:-0.761400004872;MYFfamily:-0.762806986613;PAX6:-0.772163926072;NFE2L1:-0.804480449222;NKX6-1,2:-0.810645710365;MTE{core}:-0.814261541059;TGIF1:-0.838680354057;PAX3,7:-0.854526285498;NRF1:-0.857351083735;BREu{core}:-0.863508013182;PRRX1,2:-0.887949197269;YY1:-0.901524000812;FOX{D1,D2}:-0.925884252253;MZF1:-0.940573318376;MAFB:-0.960474968395;ATF5_CREB3:-0.96340837028;ELF1,2,4:-0.964032935691;HOXA9_MEIS1:-0.974388936861;FOXN1:-0.992893852304;TLX2:-0.999923007122;PRDM1:-1.01363485389;FOXP3:-1.01527370063;ELK1,4_GABP{A,B1}:-1.03203139099;GATA4:-1.03697996197;ZFP161:-1.04210371006;EVI1:-1.05934779065;FOXP1:-1.10637964108;HBP1_HMGB_SSRP1_UBTF:-1.11659398276;NFATC1..3:-1.12610079516;BPTF:-1.1578268395;ATF4:-1.1667953031;IRF1,2:-1.19486707203;ATF6:-1.25199375356;ALX1:-1.26240441216;CDX1,2,4:-1.28435385539;IKZF2:-1.30034583702;AHR_ARNT_ARNT2:-1.30741626782;CREB1:-1.31149473189;ZBTB16:-1.3237705212;NANOG{mouse}:-1.35730523254;AIRE:-1.37447118313;DMAP1_NCOR{1,2}_SMARC:-1.40719031532;STAT1,3:-1.43764739937;HMGA1,2:-1.47384753256;NKX3-1:-1.48545031628;XBP1:-1.54885998989;EN1,2:-1.65743984206;FOXD3:-1.83387015515;SREBF1,2:-1.91750308516
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11507-119G4;search_select_hide=table117:FF:11507-119G4
}}
}}

Latest revision as of 18:05, 4 June 2020

Name:Esophageal Epithelial Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11323
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueesophagus
dev stageNA
sexNA
ageNA
cell typeesophageal epithelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:4602
catalog numberSC2705
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005295
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11323 CAGE DRX008237 DRR009109
Accession ID Hg19

Library idBAMCTSS
CNhs11323 DRZ000534 DRZ001919
Accession ID Hg38

Library idBAMCTSS
CNhs11323 DRZ011884 DRZ013269
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005295
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10011.TGACCA sRNA-Seq DRX037166 DRR041532
Accession ID Hg19

Library idBAMCTSS
SRhi10011.TGACCA DRZ007174


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0507
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.205
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.272
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0856
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.395
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.00905
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0885
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.763
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0663
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal1.366
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.144
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.363
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.224
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.157
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.157
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11323

Jaspar motifP-value
MA0002.20.404
MA0003.10.376
MA0004.10.819
MA0006.10.244
MA0007.10.302
MA0009.10.102
MA0014.10.598
MA0017.10.0724
MA0018.20.00183
MA0019.10.34
MA0024.10.0552
MA0025.10.48
MA0027.10.779
MA0028.10.0242
MA0029.10.2
MA0030.10.466
MA0031.10.065
MA0035.20.094
MA0038.10.977
MA0039.20.0172
MA0040.10.635
MA0041.10.293
MA0042.10.936
MA0043.10.0306
MA0046.10.134
MA0047.20.166
MA0048.10.864
MA0050.12.30457e-9
MA0051.15.85801e-6
MA0052.10.846
MA0055.10.2
MA0057.10.0362
MA0058.10.469
MA0059.10.605
MA0060.10.616
MA0061.10.663
MA0062.21.79772e-4
MA0065.20.00872
MA0066.10.206
MA0067.10.0194
MA0068.10.0106
MA0069.10.747
MA0070.10.149
MA0071.10.443
MA0072.10.692
MA0073.10.932
MA0074.10.658
MA0076.10.00118
MA0077.10.194
MA0078.10.47
MA0079.20.54
MA0080.21.70694e-5
MA0081.10.0206
MA0083.10.795
MA0084.10.0546
MA0087.10.654
MA0088.10.651
MA0090.10.00869
MA0091.10.782
MA0092.10.448
MA0093.10.64
MA0099.22.14863e-8
MA0100.10.132
MA0101.10.616
MA0102.20.0743
MA0103.11.33338e-5
MA0104.20.972
MA0105.10.488
MA0106.13.17986e-6
MA0107.10.732
MA0108.20.00175
MA0111.10.876
MA0112.20.0329
MA0113.10.234
MA0114.10.0456
MA0115.10.887
MA0116.10.131
MA0117.10.334
MA0119.10.083
MA0122.10.819
MA0124.10.285
MA0125.10.0316
MA0131.10.211
MA0135.10.0155
MA0136.15.71016e-5
MA0137.20.0347
MA0138.20.148
MA0139.10.691
MA0140.10.747
MA0141.10.264
MA0142.10.0822
MA0143.10.555
MA0144.10.882
MA0145.10.0403
MA0146.10.0554
MA0147.10.711
MA0148.10.0573
MA0149.10.0628
MA0150.10.576
MA0152.10.0987
MA0153.10.215
MA0154.10.0958
MA0155.10.239
MA0156.16.43726e-4
MA0157.10.13
MA0159.10.317
MA0160.10.412
MA0162.10.151
MA0163.10.46
MA0164.10.37
MA0258.10.194
MA0259.10.959



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11323

Novel motifP-value
10.515
100.581
1000.677
1010.497
1020.578
1030.186
1040.537
1050.074
1060.0487
1070.0171
1080.47
1090.0223
110.122
1100.204
1110.205
1120.325
1130.913
1140.31
1150.37
1160.579
1170.754
1180.724
1190.117
120.435
1200.429
1210.545
1220.101
1230.873
1240.917
1250.472
1260.586
1270.123
1280.112
1290.05
130.162
1300.882
1310.293
1320.124
1334.78259e-4
1340.933
1350.425
1360.743
1370.358
1380.89
1390.655
140.592
1400.88
1410.968
1420.0603
1430.457
1440.554
1450.113
1460.0402
1470.22
1480.983
1490.233
150.579
1500.341
1510.292
1520.0964
1530.982
1540.609
1550.362
1560.11
1570.351
1580.543
1590.936
160.218
1600.0273
1610.301
1620.399
1630.754
1640.877
1650.559
1660.736
1670.302
1680.545
1690.0515
170.132
180.197
190.334
20.156
200.73
210.948
220.151
230.166
240.0797
250.945
260.216
270.269
280.912
290.744
30.428
300.139
310.579
320.317
330.286
340.545
350.514
360.9
370.421
380.302
390.203
40.162
400.0105
410.901
420.499
430.355
440.666
450.151
460.264
470.347
480.196
490.366
50.637
500.429
510.453
520.293
530.981
540.47
550.364
560.3
570.178
580.558
590.048
60.368
600.139
610.711
620.575
630.144
640.204
650.0843
660.532
670.836
680.652
690.0738
70.4
700.0045
710.256
720.754
730.0929
740.0468
750.54
760.53
770.0191
780.108
790.645
80.117
800.963
810.804
820.449
830.926
840.523
850.11
860.751
870.359
880.238
890.0362
90.622
900.148
910.166
920.443
930.917
940.451
950.333
960.787
970.928
980.302
990.0136



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11323


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)
0002252 (epithelial cell of esophagus)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001043 (esophagus)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000466 (immaterial anatomical entity)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004921 (subdivision of digestive tract)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0005177 (trunk region element)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001041 (foregut)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000056 (human epithelial cell of esophagus sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)

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