FFCP PHASE1:Mm9::chr5:25016684..25016685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=896 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENSMUST00000104199_5end | |||
|cluster_id=chr5:25016684..25016685,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000104199_5end | |||
|id=chr5:25016684..25016685,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.83e-29!115;CL:0000004!4.83e-29!115;CL:0000255!4.83e-29!115;CL:0002371!1.04e-27!118;CL:0000144!1.90e-26!121;CL:0000012!1.90e-26!121;CL:0000034!6.99e-25!97;CL:0000723!2.00e-24!91;CL:0000048!2.00e-24!91;CL:0002319!7.05e-24!43;CL:0000221!4.94e-23!44;CL:0000133!4.94e-23!44;CL:0000055!5.37e-23!50;CL:0002321!6.61e-22!70;CL:0000220!6.61e-22!70;CL:0000540!1.95e-19!33;CL:0000047!1.95e-19!33;CL:0000031!1.95e-19!33;CL:0000404!1.95e-19!33;CL:0000393!3.63e-19!39;CL:0000211!3.63e-19!39;CL:0000117!5.26e-14!23;CL:0000337!5.26e-14!23;CL:0000219!1.77e-11!54;CL:0000839!3.48e-09!13;CL:0002320!1.16e-08!46;CL:0000134!1.16e-08!46;CL:0002031!4.40e-08!25;CL:0000763!6.57e-08!16;CL:0000107!1.68e-07!9;CL:0002453!3.19e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.61e-20,70;CL:0002319,1.34e-19,43;CL:0000221,5.43e-19,44;CL:0000133,5.43e-19,44;CL:0000723,6.62e-16,91;CL:0000048,6.62e-16,91;CL:0000034,2.18e-15,97;CL:0000540,2.78e-15,33;CL:0000047,2.78e-15,33;CL:0000031,2.78e-15,33;CL:0000404,2.78e-15,33;CL:0000393,3.69e-15,39;CL:0000211,3.69e-15,39;CL:0000117,1.43e-11,23;CL:0000337,1.43e-11,23;CL:0000219,3.69e-07,54;CL:0000764,6.15e-07,3;CL:0000765,6.15e-07,3;CL:0000038,6.15e-07,3;CL:0000547,6.15e-07,3;CL:0002453,8.31e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.15e-07,3;DOID:0060083,6.15e-07,3;DOID:1240,6.15e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.71e-21!73;UBERON:0005743!2.71e-21!73;UBERON:0002020!1.10e-20!34;UBERON:0000073!2.79e-20!75;UBERON:0001016!2.79e-20!75;UBERON:0002791!5.98e-17!29;UBERON:0003528!5.98e-17!29;UBERON:0001893!5.98e-17!29;UBERON:0000956!1.77e-13!21;UBERON:0001869!1.77e-13!21;UBERON:0000203!1.77e-13!21;UBERON:0002619!1.66e-12!17;UBERON:0001049!4.38e-12!52;UBERON:0005068!4.38e-12!52;UBERON:0006241!4.38e-12!52;UBERON:0007135!4.38e-12!52;UBERON:0002021!1.99e-11!10;UBERON:0000411!1.99e-11!10;UBERON:0001950!1.99e-11!10;UBERON:0004121!2.26e-11!102;UBERON:0000924!2.26e-11!102;UBERON:0006601!2.26e-11!102;UBERON:0002780!2.08e-10!39;UBERON:0001890!2.08e-10!39;UBERON:0006240!2.08e-10!39;UBERON:0002616!3.15e-10!49;UBERON:0003080!6.01e-10!40;UBERON:0000955!7.70e-10!50;UBERON:0006238!7.70e-10!50;UBERON:0002346!8.45e-09!71;UBERON:0003075!8.45e-09!71;UBERON:0007284!8.45e-09!71;UBERON:0002384!1.16e-08!46;UBERON:0002410!1.68e-07!9;UBERON:0003056!2.37e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.98e-22,73;UBERON:0001016,4.17e-21,75;UBERON:0002020,5.08e-19,34;UBERON:0002021,2.26e-17,10;UBERON:0000411,2.26e-17,10;UBERON:0001950,2.26e-17,10;UBERON:0003528,8.35e-17,29;UBERON:0002791,8.35e-17,29;UBERON:0001893,8.35e-17,29;UBERON:0000956,9.27e-16,21;UBERON:0001869,9.27e-16,21;UBERON:0000203,9.27e-16,21;UBERON:0002619,1.43e-15,17;UBERON:0004121,1.20e-14,95;UBERON:0000924,1.20e-14,95;UBERON:0006601,1.20e-14,95;UBERON:0000073,1.99e-14,54;UBERON:0001049,8.21e-13,52;UBERON:0005068,8.21e-13,52;UBERON:0006241,8.21e-13,52;UBERON:0007135,8.21e-13,52;UBERON:0002780,3.49e-11,39;UBERON:0001890,3.49e-11,39;UBERON:0006240,3.49e-11,39;UBERON:0002616,4.40e-11,46;UBERON:0003080,8.85e-11,40;UBERON:0000955,9.91e-11,47;UBERON:0006238,9.91e-11,47;UBERON:0002346,3.14e-10,64;UBERON:0003075,3.14e-10,64;UBERON:0007284,3.14e-10,64;UBERON:0010371,3.44e-08,73;UBERON:0003056,6.49e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.174840804837995,0.999329285446988,0,2.09868563438444,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0.252030129759931,0,11.4305521222734,6.1506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.61630187656536,0.439372365468944,3.69416808241138,1.1198913730029,2.87505128729943,0,0,0.336093799142464,1.28629718017973,0.573066879877513,4.12537673821954,1.01158230429799,0,5.70448263155561,2.71075625655306,1.77858959222228,0,0.988866362566974,6.3943210345149,0.299600110518405,1.92109152660777,1.34796496001021,1.4850653216486,0.630974884054146,2.28520787523043,2.87129103237098,1.34739879136449,0.862609239164127,2.75765635983006,0,1.14918604276669,1.0752457327937,3.16527090552465,0.823388792421687,1.04182674111352,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,1.99320353118744,0.931997229126503,0,0,0,0,2.03991400112325,1.61910957491345,4.54843492213368,8.51251085484938,0,0,0,0,0,1.28326477414318,0,0,0.649473123033642,1.26679932737549,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,6.03165135757089,4.35124547054968,0,0,0,0,0,0,0.94652465824877,0.390438744296638,1.72338718186239,0.716906393857656,1.33679204449436,1.13230612315533,2.02405350837447,2.04579100537918,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,1.55390167361845,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,3.95326289831947,6.90487854760765,5.15605962095457,5.15559547031063,4.11049511862385,9.06472676867641,2.70009000092722,4.5032120322422,1.81256963593682,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.174840804837995,0.999329285446988,0,2.09868563438444,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0.252030129759931,0,11.4305521222734,6.1506478758457,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.61630187656536,0.439372365468944,3.69416808241138,1.1198913730029,2.87505128729943,0,0,0.336093799142464,1.28629718017973,0.573066879877513,4.12537673821954,1.01158230429799,0,5.70448263155561,2.71075625655306,1.77858959222228,0,0.988866362566974,6.3943210345149,0.299600110518405,1.92109152660777,1.34796496001021,1.4850653216486,0.630974884054146,2.28520787523043,2.87129103237098,1.34739879136449,0.862609239164127,2.75765635983006,0,1.14918604276669,1.0752457327937,3.16527090552465,0.823388792421687,1.04182674111352,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,1.99320353118744,0.931997229126503,0,0,0,0,2.03991400112325,1.61910957491345,4.54843492213368,8.51251085484938,0,0,0,0,0,1.28326477414318,0,0,0.649473123033642,1.26679932737549,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,6.03165135757089,4.35124547054968,0,0,0,0,0,0,0.94652465824877,0.390438744296638,1.72338718186239,0.716906393857656,1.33679204449436,1.13230612315533,2.02405350837447,2.04579100537918,1.58115111178609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,1.55390167361845,0.269141569828427,0.503653849092235,0,0,0,0,0.501572104035363,3.95326289831947,6.90487854760765,5.15605962095457,5.15559547031063,4.11049511862385,9.06472676867641,2.70009000092722,4.5032120322422,1.81256963593682,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824171801606613,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@ENSMUST00000104199 | |||
}} | }} |
Latest revision as of 05:38, 4 August 2015
Short description: | p1@ENSMUST00000104199 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000104199_5end |
Coexpression cluster: | MCL_coexpression_mm9:896 |
Association with transcript: | 1bp_to_ENSMUST00000104199_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.61e-20 | 70 |
neural cell | 1.34e-19 | 43 |
ectodermal cell | 5.43e-19 | 44 |
neurectodermal cell | 5.43e-19 | 44 |
somatic stem cell | 6.62e-16 | 91 |
multi fate stem cell | 6.62e-16 | 91 |
stem cell | 2.18e-15 | 97 |
neuron | 2.78e-15 | 33 |
neuronal stem cell | 2.78e-15 | 33 |
neuroblast | 2.78e-15 | 33 |
electrically signaling cell | 2.78e-15 | 33 |
electrically responsive cell | 3.69e-15 | 39 |
electrically active cell | 3.69e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.43e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-11 | 23 |
motile cell | 3.69e-07 | 54 |
erythroid lineage cell | 6.15e-07 | 3 |
erythroblast | 6.15e-07 | 3 |
erythroid progenitor cell | 6.15e-07 | 3 |
proerythroblast | 6.15e-07 | 3 |
oligodendrocyte precursor cell | 8.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.98e-22 | 73 |
nervous system | 4.17e-21 | 75 |
gray matter | 5.08e-19 | 34 |
occipital lobe | 2.26e-17 | 10 |
visual cortex | 2.26e-17 | 10 |
neocortex | 2.26e-17 | 10 |
brain grey matter | 8.35e-17 | 29 |
regional part of telencephalon | 8.35e-17 | 29 |
telencephalon | 8.35e-17 | 29 |
cerebral cortex | 9.27e-16 | 21 |
cerebral hemisphere | 9.27e-16 | 21 |
pallium | 9.27e-16 | 21 |
regional part of cerebral cortex | 1.43e-15 | 17 |
ectoderm-derived structure | 1.20e-14 | 95 |
ectoderm | 1.20e-14 | 95 |
presumptive ectoderm | 1.20e-14 | 95 |
regional part of nervous system | 1.99e-14 | 54 |
neural tube | 8.21e-13 | 52 |
neural rod | 8.21e-13 | 52 |
future spinal cord | 8.21e-13 | 52 |
neural keel | 8.21e-13 | 52 |
regional part of forebrain | 3.49e-11 | 39 |
forebrain | 3.49e-11 | 39 |
future forebrain | 3.49e-11 | 39 |
regional part of brain | 4.40e-11 | 46 |
anterior neural tube | 8.85e-11 | 40 |
brain | 9.91e-11 | 47 |
future brain | 9.91e-11 | 47 |
neurectoderm | 3.14e-10 | 64 |
neural plate | 3.14e-10 | 64 |
presumptive neural plate | 3.14e-10 | 64 |
ecto-epithelium | 3.44e-08 | 73 |
pre-chordal neural plate | 6.49e-08 | 49 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.15e-07 | 3 |
immune system cancer | 6.15e-07 | 3 |
leukemia | 6.15e-07 | 3 |