Personal tools

FFCP PHASE1:Mm9::chr11:96685444..96685473,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18023
|EntrezGene=18023
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=A2A6D0,Q3V3M1
|UniProt=A2A6D0,Q3V3M1
|association_with_transcript=-3bp_to_ENSMUST00000126949,ENSMUST00000169828,NM_001130451,NM_001130452,uc011ydm.1,uc011ydn.1_5end
|association_with_transcript=-3bp_to_ENSMUST00000126949,ENSMUST00000169828,NM_001130451,NM_001130452,uc011ydm.1,uc011ydn.1_5end
|cluster_id=chr11:96685444..96685473,-
|description=CAGE_peak_5_at_Nfe2l1_5end
|description=CAGE_peak_5_at_Nfe2l1_5end
|id=chr11:96685444..96685473,-
|id=chr11:96685444..96685473,-
|ontology_enrichment_celltype=CL:0000055!9.84e-07!50
|ontology_enrichment_celltype=CL:0000055!9.84e-07!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.65e-19!102;UBERON:0000924!9.65e-19!102;UBERON:0006601!9.65e-19!102;UBERON:0000073!8.61e-18!75;UBERON:0001016!8.61e-18!75;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0001049!1.76e-17!52;UBERON:0005068!1.76e-17!52;UBERON:0006241!1.76e-17!52;UBERON:0007135!1.76e-17!52;UBERON:0000955!6.75e-17!50;UBERON:0006238!6.75e-17!50;UBERON:0002616!2.80e-16!49;UBERON:0002346!3.23e-16!71;UBERON:0003075!3.23e-16!71;UBERON:0007284!3.23e-16!71;UBERON:0000033!3.45e-14!63;UBERON:0002020!1.68e-11!34;UBERON:0003080!6.87e-11!40;UBERON:0002780!3.06e-10!39;UBERON:0001890!3.06e-10!39;UBERON:0006240!3.06e-10!39;UBERON:0002791!4.33e-09!29;UBERON:0003528!4.33e-09!29;UBERON:0001893!4.33e-09!29;UBERON:0003056!1.20e-08!49;UBERON:0003076!5.47e-08!12;UBERON:0003057!5.47e-08!12;UBERON:0007811!2.59e-07!86;UBERON:0002021!2.97e-07!10;UBERON:0000411!2.97e-07!10;UBERON:0001950!2.97e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.88e-27,54;UBERON:0001049,4.31e-24,52;UBERON:0005068,4.31e-24,52;UBERON:0006241,4.31e-24,52;UBERON:0007135,4.31e-24,52;UBERON:0001017,1.97e-23,73;UBERON:0001016,1.54e-22,75;UBERON:0000955,1.77e-21,47;UBERON:0006238,1.77e-21,47;UBERON:0002616,2.74e-20,46;UBERON:0002346,2.57e-19,64;UBERON:0003075,2.57e-19,64;UBERON:0007284,2.57e-19,64;UBERON:0002020,5.53e-18,34;UBERON:0004121,5.63e-18,95;UBERON:0000924,5.63e-18,95;UBERON:0006601,5.63e-18,95;UBERON:0003080,1.95e-16,40;UBERON:0010371,7.42e-16,73;UBERON:0003528,7.93e-16,29;UBERON:0002791,7.93e-16,29;UBERON:0001893,7.93e-16,29;UBERON:0010314,9.20e-16,92;UBERON:0002780,3.86e-15,39;UBERON:0001890,3.86e-15,39;UBERON:0006240,3.86e-15,39;UBERON:0002021,1.72e-14,10;UBERON:0000411,1.72e-14,10;UBERON:0001950,1.72e-14,10;UBERON:0003056,1.64e-13,49;UBERON:0002619,6.46e-13,17;UBERON:0000956,8.59e-12,21;UBERON:0001869,8.59e-12,21;UBERON:0000203,8.59e-12,21;UBERON:0003076,2.02e-08,12;UBERON:0003057,2.02e-08,12;UBERON:0004111,4.09e-08,122;UBERON:0002950,4.52e-08,4;UBERON:0001891,4.52e-08,4;UBERON:0009616,4.52e-08,4;UBERON:0010286,4.52e-08,4;UBERON:0000025,7.44e-08,114;UBERON:0007023,5.37e-07,51
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0.0992909512008853,0,0.95995453676044,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.183546752161682,0.782391344348039,0.65407546914134,1.75748946187577,1.36100929351998,0.839918529752175,1.43752564364972,0,0,0,0.771778308107841,2.57880095944881,0.515672092277442,0.404632921719196,0,0,0,0,4.04954872776629,6.92206453796882,7.8152812644071,0.599200221036809,2.30530983192933,0.103689612308478,0,0,3.71346279724945,3.3130281142742,0,0.383381884072945,0,9.91042928994498,10.0872997087298,11.2132769277058,0.395658863190582,0.274462930807229,1.04182674111352,15.355064945076,4.50210088025344,7.02871939773326,0.589257170947335,3.27454865837937,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,3.84979432242953,0,0,0.216491041011214,0,0,0.45673551887624,0.776813650941515,1.48442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.60289056221049,1.17588707135705,1.88499886994513,0.741584903203122,0.144599356919912,0,0,0.220841518460394,0,0,2.92780797011547,3.56059401582874,0.510914110417183,0,0,0,10.6351353977424,7.32000964509802,0.628271760564322,7.12679712788333,7.41574826257959,9.14267396062064,8.59878694259116,0.101839363850316,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0,0,0.136072998302656,0,0,1.81092359517311,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,2.73376933133365,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,1.50791283939272,3.80733978673097,0.491764273019036,0,20.5504755184374,15.9407893765396,0.655739781506702,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0,3.53453448063988,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,4.21674434299995,0,2.38307724027652,0,0.258717367565509,0,0.177340233642274,0.891844088010353,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,1.32317038832977,0.49465875882444,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.582961673259701,19.284231409093,0,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.258319646955462,0.506868376472335,0,0,0,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,2.72076460338254,0,0.179427713218951,0.167884616364078,0.965947970160952,0.750729901804728,0,0,0.501572104035363,6.21227026878773,2.30162618253588,4.01026859407578,1.20297227640581,4.7955776383945,3.0215755895588,2.02506750069542,3.15224842256954,2.71885445390523,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.338458431566706,0.182927972872773,0,0.407412341537585,0,0.711810108745045,0.197008964751127,0,0.309873682371932,0,0,0,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0.0992909512008853,0,0.95995453676044,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.811015449756117,0.183546752161682,0.782391344348039,0.65407546914134,1.75748946187577,1.36100929351998,0.839918529752175,1.43752564364972,0,0,0,0.771778308107841,2.57880095944881,0.515672092277442,0.404632921719196,0,0,0,0,4.04954872776629,6.92206453796882,7.8152812644071,0.599200221036809,2.30530983192933,0.103689612308478,0,0,3.71346279724945,3.3130281142742,0,0.383381884072945,0,9.91042928994498,10.0872997087298,11.2132769277058,0.395658863190582,0.274462930807229,1.04182674111352,15.355064945076,4.50210088025344,7.02871939773326,0.589257170947335,3.27454865837937,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.702222100658759,0.852151612890289,0.779358013808606,0.70667914902068,0.422530259330042,3.84979432242953,0,0,0.216491041011214,0,0,0.45673551887624,0.776813650941515,1.48442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.60289056221049,1.17588707135705,1.88499886994513,0.741584903203122,0.144599356919912,0,0,0.220841518460394,0,0,2.92780797011547,3.56059401582874,0.510914110417183,0,0,0,10.6351353977424,7.32000964509802,0.628271760564322,7.12679712788333,7.41574826257959,9.14267396062064,8.59878694259116,0.101839363850316,0.373220911830279,0,0.420883711772948,0.130120442962704,0,0,0,0.136072998302656,0,0,1.81092359517311,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,2.73376933133365,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0.159454768657487,0,0.172684981865896,0,1.50791283939272,3.80733978673097,0.491764273019036,0,20.5504755184374,15.9407893765396,0.655739781506702,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0,3.53453448063988,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,4.21674434299995,0,2.38307724027652,0,0.258717367565509,0,0.177340233642274,0.891844088010353,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,1.32317038832977,0.49465875882444,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.582961673259701,19.284231409093,0,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.258319646955462,0.506868376472335,0,0,0,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,2.72076460338254,0,0.179427713218951,0.167884616364078,0.965947970160952,0.750729901804728,0,0,0.501572104035363,6.21227026878773,2.30162618253588,4.01026859407578,1.20297227640581,4.7955776383945,3.0215755895588,2.02506750069542,3.15224842256954,2.71885445390523,4.14208249401456,0.103787347584177,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0,0,0,0.338458431566706,0.182927972872773,0,0.407412341537585,0,0.711810108745045,0.197008964751127,0,0.309873682371932,0,0,0,0.429742108096597,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p5@Nfe2l1
|short_description=p5@Nfe2l1
}}
}}

Latest revision as of 01:48, 26 September 2015

Short description:p5@Nfe2l1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Nfe2l1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: -3bp_to_ENSMUST00000126949, ENSMUST00000169828, NM_001130451, NM_001130452, uc011ydm.1, uc011ydn.1_5end
EntrezGene:Nfe2l1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Nfe2l1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.88e-2754
neural tube4.31e-2452
neural rod4.31e-2452
future spinal cord4.31e-2452
neural keel4.31e-2452
central nervous system1.97e-2373
nervous system1.54e-2275
brain1.77e-2147
future brain1.77e-2147
regional part of brain2.74e-2046
neurectoderm2.57e-1964
neural plate2.57e-1964
presumptive neural plate2.57e-1964
gray matter5.53e-1834
ectoderm-derived structure5.63e-1895
ectoderm5.63e-1895
presumptive ectoderm5.63e-1895
anterior neural tube1.95e-1640
ecto-epithelium7.42e-1673
brain grey matter7.93e-1629
regional part of telencephalon7.93e-1629
telencephalon7.93e-1629
structure with developmental contribution from neural crest9.20e-1692
regional part of forebrain3.86e-1539
forebrain3.86e-1539
future forebrain3.86e-1539
occipital lobe1.72e-1410
visual cortex1.72e-1410
neocortex1.72e-1410
pre-chordal neural plate1.64e-1349
regional part of cerebral cortex6.46e-1317
cerebral cortex8.59e-1221
cerebral hemisphere8.59e-1221
pallium8.59e-1221
posterior neural tube2.02e-0812
chordal neural plate2.02e-0812
anatomical conduit4.09e-08122
regional part of midbrain4.52e-084
midbrain4.52e-084
presumptive midbrain4.52e-084
midbrain neural tube4.52e-084
tube7.44e-08114
adult organism5.37e-0751
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:96685444..96685473,-&oldid=4226294"