FFCP PHASE1:Hg19::chr11:123525058..123525080,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55800 | |EntrezGene=55800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20665 | |HGNC=20665 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY72 | |UniProt=Q9NY72 | ||
|association_with_transcript=231bp_to_ENST00000392770_5end | |association_with_transcript=231bp_to_ENST00000392770_5end | ||
|cluster_id=chr11:123525058..123525080,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_SCN3B_5end | |description=CAGE_peak_8_at_SCN3B_5end | ||
|id=chr11:123525058..123525080,- | |id=chr11:123525058..123525080,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.02e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.56e-47!57;UBERON:0005068!3.56e-47!57;UBERON:0006241!3.56e-47!57;UBERON:0007135!3.56e-47!57;UBERON:0007023!8.03e-47!115;UBERON:0002780!5.34e-43!41;UBERON:0001890!5.34e-43!41;UBERON:0006240!5.34e-43!41;UBERON:0003080!8.25e-42!42;UBERON:0001893!1.26e-41!34;UBERON:0002020!5.57e-41!34;UBERON:0003528!5.57e-41!34;UBERON:0001869!8.84e-41!32;UBERON:0002616!1.21e-39!59;UBERON:0002791!3.54e-39!33;UBERON:0001017!3.01e-38!82;UBERON:0005743!3.38e-38!86;UBERON:0000073!5.74e-38!94;UBERON:0001016!5.74e-38!94;UBERON:0000955!5.95e-37!69;UBERON:0006238!5.95e-37!69;UBERON:0003075!2.97e-36!86;UBERON:0007284!2.97e-36!86;UBERON:0002346!3.62e-36!90;UBERON:0002619!7.30e-33!22;UBERON:0003056!9.71e-29!61;UBERON:0000956!1.68e-28!25;UBERON:0000203!1.68e-28!25;UBERON:0001950!4.49e-28!20;UBERON:0000153!5.24e-25!129;UBERON:0007811!5.24e-25!129;UBERON:0000033!1.31e-23!123;UBERON:0000924!1.97e-21!173;UBERON:0006601!1.97e-21!173;UBERON:0004121!4.88e-21!169;UBERON:0000200!3.05e-17!6;UBERON:0001871!6.37e-17!7;UBERON:0000349!9.31e-15!5;UBERON:0002420!1.16e-14!9;UBERON:0007245!1.16e-14!9;UBERON:0010009!1.16e-14!9;UBERON:0010011!1.16e-14!9;UBERON:0000454!1.16e-14!9;UBERON:0002308!6.45e-14!9;UBERON:0000125!6.45e-14!9;UBERON:0000025!4.25e-12!194;UBERON:0000369!8.67e-12!4;UBERON:0002435!8.67e-12!4;UBERON:0000204!8.67e-12!4;UBERON:0010082!8.67e-12!4;UBERON:0009663!7.07e-10!7;UBERON:0004111!8.00e-10!241;UBERON:0005383!4.34e-09!3;UBERON:0005382!4.34e-09!3;UBERON:0002771!4.58e-09!3;UBERON:0000483!7.70e-09!309;UBERON:0000119!1.20e-08!312;UBERON:0000477!1.79e-08!286;UBERON:0000475!2.40e-08!365;UBERON:0000064!3.81e-08!219;UBERON:0000988!5.30e-08!3;UBERON:0002298!1.09e-07!8;UBERON:0003076!1.83e-07!15;UBERON:0003057!1.83e-07!15;UBERON:0001870!3.25e-07!2;UBERON:0001876!6.86e-07!2;UBERON:0001954!7.90e-07!2;UBERON:0003022!7.90e-07!2;UBERON:0002421!7.90e-07!2;UBERON:0002600!7.90e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.19e-54;22!UBERON:0001950;8.25e-49;20!UBERON:0000956;2.11e-47;25!UBERON:0000203;2.11e-47;25!UBERON:0001869;2.04e-46;32!UBERON:0001893;1.65e-43;34!UBERON:0002791;2.14e-40;32!UBERON:0003528;1.66e-37;34!UBERON:0002020;1.66e-37;34!UBERON:0000200;5.41e-28;6!UBERON:0002780;1.10e-26;41!UBERON:0001890;1.10e-26;41!UBERON:0000349;1.27e-19;5!UBERON:0000073;1.72e-17;53!UBERON:0002616;1.72e-17;53!UBERON:0001870;3.58e-15;3!UBERON:0001871;2.21e-14;6!UBERON:0001017;1.32e-13;75!UBERON:0000955;1.79e-13;68!UBERON:0002022;3.09e-12;1!UBERON:0002581;8.62e-12;1!UBERON:0002902;8.62e-12;1!UBERON:0001882;8.62e-12;1!UBERON:0003112;8.62e-12;1!UBERON:0011158;8.62e-12;1!UBERON:0009899;8.62e-12;1!UBERON:0007190;8.62e-12;1!UBERON:0003128;8.62e-12;1!UBERON:0005403;8.62e-12;1!UBERON:0001703;8.62e-12;1!UBERON:0002241;8.62e-12;1!UBERON:0001016;2.11e-11;83!UBERON:0001872;2.68e-09;5!UBERON:0002021;2.68e-09;5!UBERON:0007023;4.85e-08;114!UBERON:0011216;3.23e-07;132!UBERON:0001876;9.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.04e-54,22;UBERON:0001869,3.47e-52,32;UBERON:0001893,4.16e-49,34;UBERON:0001950,4.54e-49,20;UBERON:0000956,1.24e-47,25;UBERON:0000203,1.24e-47,25;UBERON:0002791,2.34e-44,32;UBERON:0003528,9.85e-42,34;UBERON:0002020,9.85e-42,34;UBERON:0002780,1.23e-40,41;UBERON:0001890,1.23e-40,41;UBERON:0003080,1.23e-40,41;UBERON:0006240,1.23e-40,41;UBERON:0000073,3.27e-31,53;UBERON:0002616,3.27e-31,53;UBERON:0001049,1.79e-29,56;UBERON:0005068,1.79e-29,56;UBERON:0006241,1.79e-29,56;UBERON:0007135,1.79e-29,56;UBERON:0000200,2.51e-28,6;UBERON:0000955,1.63e-27,68;UBERON:0006238,1.63e-27,68;UBERON:0001016,4.26e-27,89;UBERON:0003056,5.96e-27,61;UBERON:0001017,2.00e-26,81;UBERON:0007023,2.26e-21,114;UBERON:0000349,1.02e-19,5;UBERON:0003075,1.16e-19,82;UBERON:0007284,1.16e-19,82;UBERON:0002346,1.13e-18,86;UBERON:0001870,2.42e-15,3;UBERON:0010371,3.83e-15,104;UBERON:0001871,2.31e-14,6;UBERON:0010314,1.66e-13,132;UBERON:0004121,2.94e-13,171;UBERON:0000924,2.94e-13,171;UBERON:0006601,2.94e-13,171;UBERON:0011216,1.30e-12,223;UBERON:0002022,3.65e-12,1;UBERON:0007190,5.05e-12,1;UBERON:0002581,6.26e-12,1;UBERON:0001882,6.97e-12,1;UBERON:0005403,6.97e-12,1;UBERON:0002902,7.76e-12,1;UBERON:0009899,7.76e-12,1;UBERON:0003112,1.81e-11,1;UBERON:0011158,1.81e-11,1;UBERON:0003128,1.81e-11,1;UBERON:0001703,1.81e-11,1;UBERON:0002241,1.81e-11,1;UBERON:0004761,1.81e-11,1;UBERON:0009617,1.81e-11,1;UBERON:0002021,1.92e-09,5;UBERON:0001872,2.57e-09,5;UBERON:0000025,2.48e-07,192;UBERON:0001876,8.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.562677665642051,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0.361789315876224,0,0,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,2.84898581801454,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,2.73373004961111,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,1.34228891392159,0.876336514945499,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,1.72519698234691,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.60573062741149,0,0,1.8460472781668,0,1.59061680667701,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,0.413373593002368,1.39514782426595,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,1.64431933907123,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.92363407820933,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0.404234377916439,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.562677665642051,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,0,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,0.361789315876224,0,0,0,1.53569778007781,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,2.84898581801454,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,2.73373004961111,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,1.34228891392159,0.876336514945499,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,1.72519698234691,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.60573062741149,0,0,1.8460472781668,0,1.59061680667701,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75597720007826,0,0.413373593002368,1.39514782426595,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.135939465953663,1.64431933907123,0,0,0.156986185701028,0.942693539496011,0,0,0,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,2.92363407820933,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0.404234377916439,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@SCN3B | |short_description=p8@SCN3B | ||
}} | }} |
Latest revision as of 10:19, 16 September 2015
Short description: | p8@SCN3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCN3B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 231bp_to_ENST00000392770_5end |
EntrezGene: | SCN3B |
HGNC: | 20665 |
UniProt: | Q9NY72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data