FFCP PHASE1:Hg19::chr11:62311004..62311025,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:62311004..62311025,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr11:62311004..62311025,+ | |description=CAGE_peak_at_chr11:62311004..62311025,+ | ||
|id=chr11:62311004..62311025,+ | |id=chr11:62311004..62311025,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.41e-45!140;CL:0000037!1.01e-36!172;CL:0000566!1.01e-36!172;CL:0002057!2.98e-35!42;CL:0002031!6.56e-35!124;CL:0000988!4.54e-34!182;CL:0000860!1.73e-32!45;CL:0002087!3.27e-32!119;CL:0002032!4.55e-30!165;CL:0000837!4.55e-30!165;CL:0000557!1.08e-28!71;CL:0000766!1.78e-28!76;CL:0002009!1.02e-24!65;CL:0000839!2.07e-24!70;CL:0000763!1.01e-21!112;CL:0000049!1.01e-21!112;CL:0002194!4.98e-21!63;CL:0000576!4.98e-21!63;CL:0000040!4.98e-21!63;CL:0000559!4.98e-21!63;CL:0000134!3.46e-13!358;CL:0002320!1.05e-12!365;CL:0000219!9.89e-12!390;CL:0000623!1.46e-11!3;CL:0000825!1.46e-11!3;CL:0000767!3.67e-11!3;CL:0000791!7.21e-11!18;CL:0000789!7.21e-11!18;CL:0002420!7.21e-11!18;CL:0002419!7.21e-11!18;CL:0000790!7.21e-11!18;CL:0000842!5.36e-10!3;CL:0000084!2.47e-09!25;CL:0000827!2.47e-09!25;CL:0000048!5.40e-09!430;CL:0000034!5.49e-09!444;CL:0000723!1.04e-08!436;CL:0001014!2.04e-08!2;CL:0001016!2.04e-08!2;CL:0000838!4.02e-08!52;CL:0000542!6.47e-08!53;CL:0000051!6.47e-08!53;CL:0000224!1.33e-07!4;CL:0000453!9.29e-07!5 | |ontology_enrichment_celltype=CL:0000738!1.41e-45!140;CL:0000037!1.01e-36!172;CL:0000566!1.01e-36!172;CL:0002057!2.98e-35!42;CL:0002031!6.56e-35!124;CL:0000988!4.54e-34!182;CL:0000860!1.73e-32!45;CL:0002087!3.27e-32!119;CL:0002032!4.55e-30!165;CL:0000837!4.55e-30!165;CL:0000557!1.08e-28!71;CL:0000766!1.78e-28!76;CL:0002009!1.02e-24!65;CL:0000839!2.07e-24!70;CL:0000763!1.01e-21!112;CL:0000049!1.01e-21!112;CL:0002194!4.98e-21!63;CL:0000576!4.98e-21!63;CL:0000040!4.98e-21!63;CL:0000559!4.98e-21!63;CL:0000134!3.46e-13!358;CL:0002320!1.05e-12!365;CL:0000219!9.89e-12!390;CL:0000623!1.46e-11!3;CL:0000825!1.46e-11!3;CL:0000767!3.67e-11!3;CL:0000791!7.21e-11!18;CL:0000789!7.21e-11!18;CL:0002420!7.21e-11!18;CL:0002419!7.21e-11!18;CL:0000790!7.21e-11!18;CL:0000842!5.36e-10!3;CL:0000084!2.47e-09!25;CL:0000827!2.47e-09!25;CL:0000048!5.40e-09!430;CL:0000034!5.49e-09!444;CL:0000723!1.04e-08!436;CL:0001014!2.04e-08!2;CL:0001016!2.04e-08!2;CL:0000838!4.02e-08!52;CL:0000542!6.47e-08!53;CL:0000051!6.47e-08!53;CL:0000224!1.33e-07!4;CL:0000453!9.29e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.85e-27;3!CL:0000767;3.80e-26;3!CL:0001014;3.43e-19;2!CL:0001016;3.43e-19;2!CL:0000791;3.37e-17;18!CL:0000789;3.37e-17;18!CL:0002419;3.37e-17;18!CL:0002393;9.29e-14;6!CL:0002397;9.29e-14;6!CL:0000624;1.29e-13;6!CL:0000084;2.91e-12;25!CL:0000094;3.50e-10;8!CL:0000453;3.24e-08;5!CL:0000625;6.83e-08;11!CL:0000097;8.91e-08;5!CL:0000766;1.08e-07;69!CL:0000081;1.53e-07;11!CL:0000840;5.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.76e-30,136;CL:0000623,2.73e-27,3;CL:0000825,2.73e-27,3;CL:0000767,2.93e-26,3;CL:0002031,1.21e-25,120;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0001014,3.43e-19,2;CL:0001016,3.43e-19,2;CL:0000791,3.47e-17,18;CL:0000789,3.47e-17,18;CL:0002420,3.47e-17,18;CL:0002419,3.47e-17,18;CL:0000790,3.47e-17,18;CL:0002087,1.85e-16,115;CL:0000766,7.56e-15,72;CL:0000624,1.34e-13,6;CL:0000557,1.38e-13,67;CL:0000763,4.31e-13,108;CL:0000049,4.31e-13,108;CL:0000838,1.85e-12,52;CL:0000084,2.97e-12,25;CL:0000827,2.97e-12,25;CL:0000542,3.36e-12,53;CL:0000051,3.36e-12,53;CL:0000094,3.18e-10,8;CL:0002009,4.96e-10,61;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0002393,2.42e-09,9;CL:0002397,2.42e-09,9;CL:0000860,3.01e-09,42;CL:0002057,3.01e-09,42;CL:0000839,4.72e-09,66;CL:0000219,1.85e-08,386;CL:0000453,3.24e-08,5;CL:0000473,5.34e-08,48;CL:0000234,5.34e-08,48;CL:0000625,6.83e-08,11;CL:0000097,8.91e-08,5;CL:0002028,8.91e-08,5;CL:0000081,1.43e-07,11;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441;CL:0000840,5.58e-07,5;CL:0001029,5.58e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;3.37e-17;18!CL:0002057;3.85e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-26!80;UBERON:0002390!4.40e-26!102;UBERON:0003061!4.40e-26!102;UBERON:0001474!2.53e-24!86;UBERON:0002193!5.12e-23!112;UBERON:0004765!1.25e-19!101;UBERON:0001434!1.25e-19!101;UBERON:0002405!1.07e-17!115;UBERON:0002384!4.75e-12!375;UBERON:0002204!4.24e-09!167;UBERON:0003081!3.99e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.57e-12,76;UBERON:0001474,8.18e-11,82;UBERON:0004765,1.04e-09,90;UBERON:0002405,2.42e-09,93;UBERON:0002384,5.20e-09,371;UBERON:0002390,8.80e-09,98;UBERON:0003061,8.80e-09,98;UBERON:0001434,1.42e-08,100;UBERON:0002193,8.16e-08,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.53531759238885,2.63187409637329,0,0,0,0,0,0.293600439334847,4.43196326825502,5.41470008169383,7.16135873362311,0,0,0,0,0,0,0,0.411167888021826,0.929119112685311,0.575384784644301,1.0246428261164,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0,0,0.962787081228281,0,0,0,0,0.870627715885752,0,0.622822248995575,0.75374599577023,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.180258620683,4.32311839024081,8.8408644569789,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.68725489096526,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,10.0803371612366,13.6394499849589,6.80674698249155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,4.56121854189699,0.288239906833923,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,6.30498432646167,10.3501235932568,7.31555306794566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0237206860235,37.1424938187816,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.53531759238885,2.63187409637329,0,0,0,0,0,0.293600439334847,4.43196326825502,5.41470008169383,7.16135873362311,0,0,0,0,0,0,0,0.411167888021826,0.929119112685311,0.575384784644301,1.0246428261164,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0,0,0.962787081228281,0,0,0,0,0.870627715885752,0,0.622822248995575,0.75374599577023,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,1.180258620683,4.32311839024081,8.8408644569789,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.68725489096526,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,10.0803371612366,13.6394499849589,6.80674698249155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,4.56121854189699,0.288239906833923,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,6.30498432646167,10.3501235932568,7.31555306794566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0237206860235,37.1424938187816,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:62311004..62311025,+ | |short_description=p@chr11:62311004..62311025,+ | ||
}} | }} |
Latest revision as of 23:40, 23 July 2015
Short description: | p@chr11:62311004..62311025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:62311004..62311025, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.57e-12 | 76 |
bone element | 8.18e-11 | 82 |
skeletal element | 1.04e-09 | 90 |
immune system | 2.42e-09 | 93 |
connective tissue | 5.20e-09 | 371 |
hematopoietic system | 8.80e-09 | 98 |
blood island | 8.80e-09 | 98 |
skeletal system | 1.42e-08 | 100 |
hemolymphoid system | 8.16e-08 | 108 |