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FFCP PHASE1:Mm9::chr1:137051218..137051263,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=558
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:137051218..137051263,+
|description=CAGE_peak_at_chr1:137051218..137051263,+
|description=CAGE_peak_at_chr1:137051218..137051263,+
|id=chr1:137051218..137051263,+
|id=chr1:137051218..137051263,+
|ontology_enrichment_celltype=CL:0000221!1.77e-22!44;CL:0000133!1.77e-22!44;CL:0002319!8.11e-22!43;CL:0000055!8.76e-18!50;CL:0000540!5.16e-17!33;CL:0000047!5.16e-17!33;CL:0000031!5.16e-17!33;CL:0000404!5.16e-17!33;CL:0000393!5.06e-14!39;CL:0000211!5.06e-14!39;CL:0000117!2.32e-11!23;CL:0000337!2.32e-11!23;CL:0002321!6.76e-07!70;CL:0000220!6.76e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000221,1.35e-28,44;CL:0000133,1.35e-28,44;CL:0002319,1.04e-27,43;CL:0000540,2.30e-22,33;CL:0000047,2.30e-22,33;CL:0000031,2.30e-22,33;CL:0000404,2.30e-22,33;CL:0000393,1.09e-17,39;CL:0000211,1.09e-17,39;CL:0000117,9.52e-15,23;CL:0000337,9.52e-15,23;CL:0002321,3.05e-12,70;CL:0002453,1.87e-08,8;CL:0000107,4.55e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.27e-40!102;UBERON:0000924!4.27e-40!102;UBERON:0006601!4.27e-40!102;UBERON:0001017!1.57e-39!73;UBERON:0005743!1.57e-39!73;UBERON:0000073!8.41e-39!75;UBERON:0001016!8.41e-39!75;UBERON:0002346!3.47e-28!71;UBERON:0003075!3.47e-28!71;UBERON:0007284!3.47e-28!71;UBERON:0000033!1.04e-27!63;UBERON:0001049!1.76e-25!52;UBERON:0005068!1.76e-25!52;UBERON:0006241!1.76e-25!52;UBERON:0007135!1.76e-25!52;UBERON:0000955!1.80e-24!50;UBERON:0006238!1.80e-24!50;UBERON:0002616!7.08e-24!49;UBERON:0003056!3.34e-19!49;UBERON:0003080!5.65e-18!40;UBERON:0002780!2.38e-17!39;UBERON:0001890!2.38e-17!39;UBERON:0006240!2.38e-17!39;UBERON:0002020!6.39e-17!34;UBERON:0002791!3.74e-14!29;UBERON:0003528!3.74e-14!29;UBERON:0001893!3.74e-14!29;UBERON:0007811!3.45e-12!86;UBERON:0000153!4.39e-11!94;UBERON:0000956!3.65e-10!21;UBERON:0001869!3.65e-10!21;UBERON:0000203!3.65e-10!21;UBERON:0002619!5.95e-09!17;UBERON:0004111!8.84e-09!122;UBERON:0003076!4.05e-08!12;UBERON:0003057!4.05e-08!12;UBERON:0000468!7.30e-08!333;UBERON:0000025!2.88e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.07e-53,73;UBERON:0001016,1.48e-50,75;UBERON:0004121,4.45e-50,95;UBERON:0000924,4.45e-50,95;UBERON:0006601,4.45e-50,95;UBERON:0002346,1.97e-36,64;UBERON:0003075,1.97e-36,64;UBERON:0007284,1.97e-36,64;UBERON:0000073,9.42e-36,54;UBERON:0010371,2.04e-34,73;UBERON:0001049,8.64e-34,52;UBERON:0005068,8.64e-34,52;UBERON:0006241,8.64e-34,52;UBERON:0007135,8.64e-34,52;UBERON:0000955,1.47e-29,47;UBERON:0006238,1.47e-29,47;UBERON:0002616,9.00e-29,46;UBERON:0010314,1.80e-27,92;UBERON:0003056,6.02e-24,49;UBERON:0003080,1.17e-23,40;UBERON:0002780,8.11e-23,39;UBERON:0001890,8.11e-23,39;UBERON:0006240,8.11e-23,39;UBERON:0002020,3.07e-22,34;UBERON:0003528,1.65e-18,29;UBERON:0002791,1.65e-18,29;UBERON:0001893,1.65e-18,29;UBERON:0000956,3.87e-13,21;UBERON:0001869,3.87e-13,21;UBERON:0000203,3.87e-13,21;UBERON:0002619,1.65e-11,17;UBERON:0004111,2.20e-11,122;UBERON:0003076,2.17e-10,12;UBERON:0003057,2.17e-10,12;UBERON:0000025,1.01e-09,114;UBERON:0011216,2.50e-09,194;UBERON:0002410,4.55e-08,9;UBERON:0002021,6.15e-07,10;UBERON:0000411,6.15e-07,10;UBERON:0001950,6.15e-07,10
|phase1_expression=5.92550734287738,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,6.25913075478431,31.6136476751647,33.3922997756397,33.8308024389253,9.79904951377538,27.3129872293446,0,0,0,0,0.573066879877513,1.03134418455488,4.24864567805155,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0.988866362566974,0,45.5392167987975,80.3016258122049,1.03689612308478,2.70011876663381,3.15487442027073,11.1403883917483,8.39300455616131,2.20483438586917,2.58782771749238,4.5960939330501,20.9220173898839,11.3641730895817,19.6616362567992,2.37395317914349,3.84248103130121,3.64639359389732,15.9134309430787,18.5711661310454,16.0438160165651,11.490514833473,9.39653093274079,5.77838282058432,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,11.6900038414645,0,0,0,0,0,0,0,0.776813650941515,1.1875371125186,0.346970653532272,0.304465478312141,0.922461989024234,1.20578112442098,2.58695155698551,0.753999547978053,1.23597483867187,1.01219549843938,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,12.8823550685081,10.4723353406728,0.510914110417183,0,0,0,11.5338792341713,7.32000964509802,5.40313714085317,10.4294592115366,10.9957646652042,13.9217989854905,7.94982189032012,1.83310854930569,0.746441823660558,0,1.47309299120532,0.780722657776222,1.14951052216736,0.720248519221397,1.20563854268572,2.4493139694478,1.40925092313335,1.21812241927647,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0,0.268273401399619,0.934122738937356,0.16455984991348,0,1.21603214318784,0.584799949701329,0.439100230582101,0.536825675041487,11.3556572224629,6.27718135513635,0,0.528901133327089,0.639864751605702,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,0,1.15289268306808,0,0.397912944082302,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0,0.350679099451593,0.379419222745544,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,1.47802552133284,0.757965647081939,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,1.56106918286239,0.788175720530955,0.8858587585951,0.637819074629948,1.3109065177259,0.690739927463582,0.144649058581512,0,0,0,0.551873492609465,13.6468001489623,10.6662634798905,0,1.00988370881749,4.41711507182759,3.90438744296638,16.8030250231583,12.1874086955802,27.6270355862169,26.8922704249391,5.26253912177363,10.2289550268959,15.8115111178609,8.67567554338879,0.567760340833074,0.178065603667255,1.30309567482861,1.15479086080775,0,0,0,0.377210159511796,0,0.307435147943927,1.29214146584111,0,0.712994756769443,0.316036757935816,0,0,1.70219802876894,1.08036656418786,3.49268446213437,1.28602221018955,1.24138163549592,1.42695054081656,2.30368628842969,5.48036908406279,0,0.847328283455281,1.10264199027481,2.14352128823924,1.13025098687134,0.482503399425247,0.119372344003136,0.164140899745061,1.1659233465194,15.9465759729038,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,1.90934123603023,0.949007980743406,0.813277868507395,0.108005340821801,1.04544148007234,1.09181281873089,0.944050424693745,0.909188012978695,0.785267825952089,0.777689839750757,1.24267862617385,0,0.299033092087958,0.330916980914195,1.55560950675238,1.29159823477731,1.68956125490778,3.99014611395563,0.651021924219751,0.419437377702843,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,3.85441652145859,0,0,0,2.12508553435409,0,0.549454872801795,0.428736758158132,0.501572104035363,3.3885110557024,5.06357760157895,2.29158205375759,4.98374228796694,6.16574267793578,3.7769694869485,4.72515750162264,7.20513925158753,8.60970577069989,4.14208249401456,0.207574695168353,0.798049746802062,0.682934423016537,0.729320151204882,1.25767897576789,1.10306105070008,0.888986911206461,1.23621034343337,0.64183841918363,1.76888048234658,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,1.03383844120104,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.470546902076653,1.18460451048347,0.548783918618318,1.05227884575137,0.814824683075171,2.80571135828869,1.30498519936592,0.886540341380071,0.409231043169689,0.929621047115796,0.964533054905707,2.49810577937946,1.87145286756327,0.859484216193193,2.10417165275728,1.54413993383661,0.927471342481686
|phase1_expression=5.92550734287738,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.04103896362567,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,6.25913075478431,31.6136476751647,33.3922997756397,33.8308024389253,9.79904951377538,27.3129872293446,0,0,0,0,0.573066879877513,1.03134418455488,4.24864567805155,1.5869729378161,1.90149421051854,0.677689064138264,0.889294796111139,0,0.988866362566974,0,45.5392167987975,80.3016258122049,1.03689612308478,2.70011876663381,3.15487442027073,11.1403883917483,8.39300455616131,2.20483438586917,2.58782771749238,4.5960939330501,20.9220173898839,11.3641730895817,19.6616362567992,2.37395317914349,3.84248103130121,3.64639359389732,15.9134309430787,18.5711661310454,16.0438160165651,11.490514833473,9.39653093274079,5.77838282058432,0.454357159999104,0.604572480854284,0,0,0,0,0,0,0.842666520790511,0,0,0,11.6900038414645,0,0,0,0,0,0,0,0.776813650941515,1.1875371125186,0.346970653532272,0.304465478312141,0.922461989024234,1.20578112442098,2.58695155698551,0.753999547978053,1.23597483867187,1.01219549843938,0,0.647067399789637,0.441683036920787,0.969750506270444,1.86391761218122,12.8823550685081,10.4723353406728,0.510914110417183,0,0,0,11.5338792341713,7.32000964509802,5.40313714085317,10.4294592115366,10.9957646652042,13.9217989854905,7.94982189032012,1.83310854930569,0.746441823660558,0,1.47309299120532,0.780722657776222,1.14951052216736,0.720248519221397,1.20563854268572,2.4493139694478,1.40925092313335,1.21812241927647,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,1.07986979021165,0,0.268273401399619,0.934122738937356,0.16455984991348,0,1.21603214318784,0.584799949701329,0.439100230582101,0.536825675041487,11.3556572224629,6.27718135513635,0,0.528901133327089,0.639864751605702,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,0,1.15289268306808,0,0.397912944082302,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0,0.350679099451593,0.379419222745544,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,1.47802552133284,0.757965647081939,0,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,1.56106918286239,0.788175720530955,0.8858587585951,0.637819074629948,1.3109065177259,0.690739927463582,0.144649058581512,0,0,0,0.551873492609465,13.6468001489623,10.6662634798905,0,1.00988370881749,4.41711507182759,3.90438744296638,16.8030250231583,12.1874086955802,27.6270355862169,26.8922704249391,5.26253912177363,10.2289550268959,15.8115111178609,8.67567554338879,0.567760340833074,0.178065603667255,1.30309567482861,1.15479086080775,0,0,0,0.377210159511796,0,0.307435147943927,1.29214146584111,0,0.712994756769443,0.316036757935816,0,0,1.70219802876894,1.08036656418786,3.49268446213437,1.28602221018955,1.24138163549592,1.42695054081656,2.30368628842969,5.48036908406279,0,0.847328283455281,1.10264199027481,2.14352128823924,1.13025098687134,0.482503399425247,0.119372344003136,0.164140899745061,1.1659233465194,15.9465759729038,0.170870880797853,0,0,0.188368457004691,0,0,0.169978429993855,0,0,1.90934123603023,0.949007980743406,0.813277868507395,0.108005340821801,1.04544148007234,1.09181281873089,0.944050424693745,0.909188012978695,0.785267825952089,0.777689839750757,1.24267862617385,0,0.299033092087958,0.330916980914195,1.55560950675238,1.29159823477731,1.68956125490778,3.99014611395563,0.651021924219751,0.419437377702843,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,3.85441652145859,0,0,0,2.12508553435409,0,0.549454872801795,0.428736758158132,0.501572104035363,3.3885110557024,5.06357760157895,2.29158205375759,4.98374228796694,6.16574267793578,3.7769694869485,4.72515750162264,7.20513925158753,8.60970577069989,4.14208249401456,0.207574695168353,0.798049746802062,0.682934423016537,0.729320151204882,1.25767897576789,1.10306105070008,0.888986911206461,1.23621034343337,0.64183841918363,1.76888048234658,0.760437899670719,1.13175804831646,1.21733959710847,0.960377286073039,1.03383844120104,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.470546902076653,1.18460451048347,0.548783918618318,1.05227884575137,0.814824683075171,2.80571135828869,1.30498519936592,0.886540341380071,0.409231043169689,0.929621047115796,0.964533054905707,2.49810577937946,1.87145286756327,0.859484216193193,2.10417165275728,1.54413993383661,0.927471342481686
|short_description=p@chr1:137051218..137051263,+
|short_description=p@chr1:137051218..137051263,+
}}
}}

Latest revision as of 20:40, 4 August 2015

Short description:p@chr1:137051218..137051263, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:137051218..137051263, +
Coexpression cluster:MCL_coexpression_mm9:558
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr1:137051218..137051263+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C333.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C845.54
Mouse Microglia, donor2.CNhs12634.11736-123E880.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D510.43
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.63
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system9.07e-5373
nervous system1.48e-5075
ectoderm-derived structure4.45e-5095
ectoderm4.45e-5095
presumptive ectoderm4.45e-5095
neurectoderm1.97e-3664
neural plate1.97e-3664
presumptive neural plate1.97e-3664
regional part of nervous system9.42e-3654
ecto-epithelium2.04e-3473
neural tube8.64e-3452
neural rod8.64e-3452
future spinal cord8.64e-3452
neural keel8.64e-3452
brain1.47e-2947
future brain1.47e-2947
regional part of brain9.00e-2946
structure with developmental contribution from neural crest1.80e-2792
pre-chordal neural plate6.02e-2449
anterior neural tube1.17e-2340
regional part of forebrain8.11e-2339
forebrain8.11e-2339
future forebrain8.11e-2339
gray matter3.07e-2234
brain grey matter1.65e-1829
regional part of telencephalon1.65e-1829
telencephalon1.65e-1829
cerebral cortex3.87e-1321
cerebral hemisphere3.87e-1321
pallium3.87e-1321
regional part of cerebral cortex1.65e-1117
anatomical conduit2.20e-11122
posterior neural tube2.17e-1012
chordal neural plate2.17e-1012
tube1.01e-09114
organ system subdivision2.50e-09194
autonomic nervous system4.55e-089
occipital lobe6.15e-0710
visual cortex6.15e-0710
neocortex6.15e-0710
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