FFCP PHASE1:Hg19::chr12:3475259..3475300,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:3475259..3475300,- | |||
|description=CAGE_peak_at_chr12:3475259..3475300,- | |description=CAGE_peak_at_chr12:3475259..3475300,- | ||
|id=chr12:3475259..3475300,- | |id=chr12:3475259..3475300,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.13e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.92e-12!143;DOID:305!2.00e-11!106;DOID:1325!3.72e-08!7;DOID:3904!3.72e-08!7;DOID:1749!1.20e-07!14;DOID:0050615!7.03e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:171;2.27e-10;10!DOID:1749;8.65e-09;14!DOID:1325;1.21e-08;7!DOID:3904;1.21e-08;7!DOID:0050615;2.70e-08;16!DOID:1324;7.34e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.18e-10,10;DOID:0050687,7.66e-09,143;DOID:1749,7.78e-09,14;DOID:1325,1.21e-08,7;DOID:3904,1.21e-08,7;DOID:0050615,2.44e-08,16;DOID:305,2.89e-07,106;DOID:1324,6.72e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.39e-24!34;UBERON:0002020!2.04e-24!34;UBERON:0003528!2.04e-24!34;UBERON:0002619!4.47e-24!22;UBERON:0001869!5.92e-24!32;UBERON:0002791!1.45e-23!33;UBERON:0001950!1.05e-22!20;UBERON:0001049!1.50e-22!57;UBERON:0005068!1.50e-22!57;UBERON:0006241!1.50e-22!57;UBERON:0007135!1.50e-22!57;UBERON:0000073!4.97e-21!94;UBERON:0001016!4.97e-21!94;UBERON:0002780!5.14e-21!41;UBERON:0001890!5.14e-21!41;UBERON:0006240!5.14e-21!41;UBERON:0005743!1.07e-20!86;UBERON:0001017!1.40e-20!82;UBERON:0000924!2.83e-20!173;UBERON:0006601!2.83e-20!173;UBERON:0003080!3.11e-20!42;UBERON:0000956!3.40e-20!25;UBERON:0000203!3.40e-20!25;UBERON:0002616!4.91e-20!59;UBERON:0000955!2.42e-19!69;UBERON:0006238!2.42e-19!69;UBERON:0004121!1.10e-18!169;UBERON:0002346!2.41e-18!90;UBERON:0003075!1.32e-16!86;UBERON:0007284!1.32e-16!86;UBERON:0007023!1.81e-16!115;UBERON:0000153!2.08e-15!129;UBERON:0007811!2.08e-15!129;UBERON:0000033!3.29e-15!123;UBERON:0003056!4.13e-13!61;UBERON:0001871!3.04e-09!7;UBERON:0000922!1.04e-08!612;UBERON:0000062!2.59e-08!511;UBERON:0000200!1.03e-07!6;UBERON:0000468!2.88e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.93e-44;20!UBERON:0002619;4.63e-43;22!UBERON:0000956;2.67e-37;25!UBERON:0000203;2.67e-37;25!UBERON:0001869;7.85e-36;32!UBERON:0002791;3.70e-33;32!UBERON:0001893;1.00e-32;34!UBERON:0003528;2.30e-30;34!UBERON:0002020;2.30e-30;34!UBERON:0002780;7.76e-21;41!UBERON:0001890;7.76e-21;41!UBERON:0001871;5.82e-15;6!UBERON:0000073;6.13e-14;53!UBERON:0002616;6.13e-14;53!UBERON:0000200;1.10e-13;6!UBERON:0002021;5.36e-12;5!UBERON:0001872;9.61e-12;5!UBERON:0000955;9.91e-12;68!UBERON:0001017;2.55e-11;75!UBERON:0001016;9.66e-10;83!UBERON:0001870;1.02e-07;3!UBERON:0002114;3.83e-07;2!UBERON:0000349;9.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.26e-44,20;UBERON:0002619,4.38e-43,22;UBERON:0001869,3.03e-40,32;UBERON:0001893,1.76e-37,34;UBERON:0000956,2.54e-37,25;UBERON:0000203,2.54e-37,25;UBERON:0002791,7.39e-37,32;UBERON:0003528,2.62e-34,34;UBERON:0002020,2.62e-34,34;UBERON:0002780,6.82e-30,41;UBERON:0001890,6.82e-30,41;UBERON:0003080,6.82e-30,41;UBERON:0006240,6.82e-30,41;UBERON:0000073,4.39e-25,53;UBERON:0002616,4.39e-25,53;UBERON:0000955,5.94e-24,68;UBERON:0006238,5.94e-24,68;UBERON:0001049,2.52e-23,56;UBERON:0005068,2.52e-23,56;UBERON:0006241,2.52e-23,56;UBERON:0007135,2.52e-23,56;UBERON:0001016,7.90e-23,89;UBERON:0001017,1.33e-21,81;UBERON:0003056,2.62e-19,61;UBERON:0011216,3.48e-18,223;UBERON:0004121,5.88e-18,171;UBERON:0000924,5.88e-18,171;UBERON:0006601,5.88e-18,171;UBERON:0002346,1.48e-17,86;UBERON:0001871,5.20e-15,6;UBERON:0003075,1.08e-14,82;UBERON:0007284,1.08e-14,82;UBERON:0010371,7.60e-14,104;UBERON:0000200,8.31e-14,6;UBERON:0002021,7.71e-12,5;UBERON:0001872,8.07e-12,5;UBERON:0007023,2.41e-11,114;UBERON:0001870,8.61e-08,3;UBERON:0004111,9.35e-08,240;UBERON:0010314,9.93e-08,132;UBERON:0002114,4.41e-07,2;UBERON:0000349,8.29e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.928896739896456,0,0,0.369754010166788,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0,0.561643155732475,0.300353785683013,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.975789649036763,1.45782745153634,0.813357600086629,0.829288440122964,1.26160425437814,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.703702806881416,0,0,0,0,0,0,0,0,0,3.95102198979638,1.71697232418975,0,0,0,0,0,0.141775097242386,0.895585227028483,1.16253575405585,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28913384510255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,20.1736664232553,0,0,0,1.9882952955326,1.54736358051564,0.556543525114529,0,0,0.398495976502139,0,6.55025144421118,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,4.84666373047609,4.45286871176886,0,0.520855522170466,0,0,5.57587896598948,3.30529745380596,0.945550727071745,4.82640722538051,0,0.173624994933292,0,1.92954301800653,1.52581736317083,0.884634079449797,0.591095237907095,2.4132393686937,0,5.15867853830832,0.0769502585037971,0,0.922255617552241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,1.56531695145672,0.971121518136371,0,7.25944296291983,3.0607276163049,0.695052375913368,1.05226393590145,2.59220478493118,0,0,0.313932918407225,0,0,0,0,2.25382514053069,0,0.52418000472609,0,0,0,0,0.0969890164884194,0.0882561266915003,2.25980740780532,0.822251547880505,0,6.64763357536726,0.586654148204409,0,0,0.19980960958213,2.01726584015748,0,0.343189995723929,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.492137407573744,0,1.59045937961861,0.681017030557878,1.60753148465019,0.687697182986169,0.415440338029185,0,0,6.25720433577654,9.05673656518018,0.709251365692784,0.83927341015997,0.422401346077626,0,0,0,0,0,0,0,0,0,1.8881279772348,0,0,0,1.32506888912221,0.517131825446202,0.66116300871345,0,0,0,0.471612915298998,0,0,0,0,8.93677760878255,0,0,0,0,5.33983927250797,5.31640907980192,4.51497180137264,2.8793914062495,0,0.221858103073705,1.05563885000352,1.66018361923477,0,0,0.285465333544967,0,0,6.23160423026548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,3.45646090379327,0,0,0,0,0,3.16968185037941,0,0,0,0,0,3.49698769298611,0.622077260032973,0.127894371303652,0,2.35898912783845,2.07498312564826,3.3946505990805,8.29042188396563,0,3.91051442581271,0,0,14.4102734691385,0,0,4.11067040617341,14.1696576325585,6.5449882213432,4.71767637753736,1.00828678488687,11.3417894041317,3.22951291263702,0,3.4351701475359,0.589848616738702,0.917142992608395,1.73288499225507,0,0.690359926060101,3.97832444232549,0,0,6.25211208986474,0,0,2.06998520703863,4.9977812617612,7.02970288752463,4.75379631952723,5.45375967667599,1.64092442705466,1.09651553371436,0,2.46219742103469,0.766574565837572,0,0,0,0,0,0,0,0.475788130837822,6.8403684505363,1.18193840883968,1.89093383216518,0,4.08500533781605,0,0.913158720509496,0,0,0.714765441766563,1.89616334079272,0,0,0,1.03608082081518,0.51215543128185,0.691259661814092,4.30227358820278,0,0,0,0.68732060563215,0,0,0.335566295393377,0,0.731507549893617,0,0,0,0.971421986118279,0,0,0.594600453887843,3.61427462524672,8.13559823916176,11.9260646417672,0.0771741581079447,0.218559560503957,49.3833161179599,0,12.0195039021829,0,0,0.8453114551668,0,0,0,0,2.14264726326789,3.17605384544123,1.84555143385087,0,1.83491713361816,0.143339583151451,0,5.23534474470043,3.49080552272302,2.1161073620616,0,0,0,0.126166424835079,0.218531143927391,0,0.203977659483963,0.534434810531121,0.0918948995348449,0,0.606229585745915,1.60778478093707,0,0.20686599172379,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| ||
|short_description=p@chr12:3475259..3475300,- | |short_description=p@chr12:3475259..3475300,- | ||
}} | }} |
Latest revision as of 08:16, 24 July 2015
Short description: | p@chr12:3475259..3475300, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3475259..3475300, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.18e-10 | 10 |
cell type cancer | 7.66e-09 | 143 |
squamous cell carcinoma | 7.78e-09 | 14 |
bronchus cancer | 1.21e-08 | 7 |
bronchogenic carcinoma | 1.21e-08 | 7 |
respiratory system cancer | 2.44e-08 | 16 |
carcinoma | 2.89e-07 | 106 |
lung cancer | 6.72e-07 | 15 |