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FFCP PHASE1:Mm9::chr18:61173854..61173915,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=240332
|EntrezGene=240332
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6PGE7
|UniProt=Q6PGE7
|association_with_transcript=-1bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end
|association_with_transcript=-1bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end
|cluster_id=chr18:61173854..61173915,-
|description=CAGE_peak_1_at_Slc6a7_5end
|description=CAGE_peak_1_at_Slc6a7_5end
|id=chr18:61173854..61173915,-
|id=chr18:61173854..61173915,-
|ontology_enrichment_celltype=CL:0000117!2.42e-11!23;CL:0000337!2.42e-11!23
|ontology_enrichment_celltype=CL:0000117!2.42e-11!23;CL:0000337!2.42e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-15,23;CL:0000337,2.85e-15,23;CL:0000540,6.62e-10,33;CL:0000047,6.62e-10,33;CL:0000031,6.62e-10,33;CL:0000404,6.62e-10,33;CL:0000393,1.53e-07,39;CL:0000211,1.53e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!7.85e-17!34;UBERON:0001049!1.32e-14!52;UBERON:0005068!1.32e-14!52;UBERON:0006241!1.32e-14!52;UBERON:0007135!1.32e-14!52;UBERON:0000955!2.61e-13!50;UBERON:0006238!2.61e-13!50;UBERON:0001017!2.75e-13!73;UBERON:0005743!2.75e-13!73;UBERON:0002791!4.21e-13!29;UBERON:0003528!4.21e-13!29;UBERON:0001893!4.21e-13!29;UBERON:0000073!6.91e-13!75;UBERON:0001016!6.91e-13!75;UBERON:0002616!1.15e-12!49;UBERON:0000033!1.46e-10!63;UBERON:0003080!9.20e-10!40;UBERON:0002619!9.41e-10!17;UBERON:0002021!9.99e-10!10;UBERON:0000411!9.99e-10!10;UBERON:0001950!9.99e-10!10;UBERON:0002346!1.21e-09!71;UBERON:0003075!1.21e-09!71;UBERON:0007284!1.21e-09!71;UBERON:0002780!3.38e-09!39;UBERON:0001890!3.38e-09!39;UBERON:0006240!3.38e-09!39;UBERON:0004121!4.03e-09!102;UBERON:0000924!4.03e-09!102;UBERON:0006601!4.03e-09!102;UBERON:0003056!3.18e-08!49;UBERON:0000956!5.35e-08!21;UBERON:0001869!5.35e-08!21;UBERON:0000203!5.35e-08!21;UBERON:0007811!2.58e-07!86;UBERON:0002420!8.90e-07!8;UBERON:0007245!8.90e-07!8;UBERON:0010009!8.90e-07!8;UBERON:0010011!8.90e-07!8;UBERON:0000454!8.90e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.20e-27,54;UBERON:0002020,1.16e-24,34;UBERON:0001049,1.54e-24,52;UBERON:0005068,1.54e-24,52;UBERON:0006241,1.54e-24,52;UBERON:0007135,1.54e-24,52;UBERON:0001017,1.74e-24,73;UBERON:0001016,1.84e-23,75;UBERON:0000955,2.99e-19,47;UBERON:0006238,2.99e-19,47;UBERON:0003528,8.04e-19,29;UBERON:0002791,8.04e-19,29;UBERON:0001893,8.04e-19,29;UBERON:0002346,8.66e-19,64;UBERON:0003075,8.66e-19,64;UBERON:0007284,8.66e-19,64;UBERON:0002616,3.07e-18,46;UBERON:0004121,2.29e-17,95;UBERON:0000924,2.29e-17,95;UBERON:0006601,2.29e-17,95;UBERON:0003080,4.81e-16,40;UBERON:0010371,5.63e-16,73;UBERON:0002780,4.06e-15,39;UBERON:0001890,4.06e-15,39;UBERON:0006240,4.06e-15,39;UBERON:0002021,1.79e-14,10;UBERON:0000411,1.79e-14,10;UBERON:0001950,1.79e-14,10;UBERON:0003056,1.62e-12,49;UBERON:0002619,2.71e-12,17;UBERON:0000956,6.96e-11,21;UBERON:0001869,6.96e-11,21;UBERON:0000203,6.96e-11,21;UBERON:0002420,8.04e-10,8;UBERON:0007245,8.04e-10,8;UBERON:0010009,8.04e-10,8;UBERON:0010011,8.04e-10,8;UBERON:0000454,8.04e-10,8;UBERON:0010314,1.08e-09,92;UBERON:0003076,2.05e-09,12;UBERON:0003057,2.05e-09,12;UBERON:0002240,2.77e-08,6;UBERON:0005174,2.77e-08,6;UBERON:0001137,2.77e-08,6;UBERON:0001948,2.15e-07,5;UBERON:0002315,2.15e-07,5
|phase1_expression=0,0,0,0,0,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.04103896362567,0,0,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,6.27181028664753,10.5798195854407,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0,0,0,22.2807767834967,25.3998822094356,0.979926393719632,0.670918297127655,4.5960939330501,13.2139057199266,20.0469120793745,16.1286859919056,10.5509030184155,13.631658896759,8.33461392890816,12.0048689570594,19.1339287410771,13.7518422999129,20.0347438122094,19.9320353118744,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0,0,0,11.833460512981,5.94750783664214,5.27748278874031,21.9018643442268,24.8043993610421,13.9217989854905,21.9025705141473,0.101839363850316,0,0,0,0,0,0,0,0.408218994907967,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,19.767255165028,2.88132914661996,0,0,0,0,0.257734922644187,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,6.26147300952389,8.08760637486202,0,0,0,0,0,0,0,1.13230612315533,0,0,0,16.0660658210904,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0,0.119372344003136,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.716106782669926,0.596044064343795,0.240390899039938,0,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0,0,36.7088697701093,43.2705722316746,35.5195218332426,41.0729105801413,13.0165678756422,21.1510291269116,26.3258775090404,22.9663813644352,23.1102628581944,24.8524949640874,0,0,0.341467211508268,0.972426868273176,0.419226325255965,1.47074806760011,2.44471400581777,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.77918864192777,2.30490548657529,1.95280594449085,1.42888107384922,2.0859178670074,1.35036454324594,1.64834360321323,2.35518272215036,0.342869252385415,1.59728225543404,0.238436189947321,1.59881058295561,1.69396884747595,2.11536519729191,1.46342378298218,0.789209134313529,0.814824683075171,1.68342681497322,2.01679530811096,2.36410757701352,3.27384834535751,3.25367366490529,1.35034627686799,2.74791635731741,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.927471342481686
|phase1_expression=0,0,0,0,0,1.34303417529512,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,2.04103896362567,0,0,0.47997726838022,0,0.57423196411502,0,0.646413698057667,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0.577703239502549,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,6.27181028664753,10.5798195854407,3.80298842103708,0,0,0,0,0,0,0.384218305321555,0,0,0,22.2807767834967,25.3998822094356,0.979926393719632,0.670918297127655,4.5960939330501,13.2139057199266,20.0469120793745,16.1286859919056,10.5509030184155,13.631658896759,8.33461392890816,12.0048689570594,19.1339287410771,13.7518422999129,20.0347438122094,19.9320353118744,4.84638559145781,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,2.34224637609238,2.72280718857492,0.255457055208591,0,0,0,11.833460512981,5.94750783664214,5.27748278874031,21.9018643442268,24.8043993610421,13.9217989854905,21.9025705141473,0.101839363850316,0,0,0,0,0,0,0,0.408218994907967,0.12811372028485,0.374806898238915,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,19.767255165028,2.88132914661996,0,0,0,0,0.257734922644187,0.80673409849337,0.889512175379481,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,6.26147300952389,8.08760637486202,0,0,0,0,0,0,0,1.13230612315533,0,0,0,16.0660658210904,0,0,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0,0,0.119372344003136,0,0.582961673259701,4.26478194624172,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0,0.337912250981556,0.469428954583016,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0.716106782669926,0.596044064343795,0.240390899039938,0,0,0.0762068066549998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,0.906921534460845,0,0,0,0,0.750729901804728,0.183151624267265,0,0,36.7088697701093,43.2705722316746,35.5195218332426,41.0729105801413,13.0165678756422,21.1510291269116,26.3258775090404,22.9663813644352,23.1102628581944,24.8524949640874,0,0,0.341467211508268,0.972426868273176,0.419226325255965,1.47074806760011,2.44471400581777,1.64828045791115,1.92551525755089,2.02157769411038,1.01391719956096,1.50901073108861,1.77918864192777,2.30490548657529,1.95280594449085,1.42888107384922,2.0859178670074,1.35036454324594,1.64834360321323,2.35518272215036,0.342869252385415,1.59728225543404,0.238436189947321,1.59881058295561,1.69396884747595,2.11536519729191,1.46342378298218,0.789209134313529,0.814824683075171,1.68342681497322,2.01679530811096,2.36410757701352,3.27384834535751,3.25367366490529,1.35034627686799,2.74791635731741,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.927471342481686
|short_description=p1@Slc6a7
|short_description=p1@Slc6a7
}}
}}

Latest revision as of 13:47, 1 October 2015

Short description:p1@Slc6a7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc6a7_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -1bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end
EntrezGene:Slc6a7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc6a7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.83
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D521.90
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A38.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.07
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.85e-1523
neuroblast (sensu Vertebrata)2.85e-1523
neuron6.62e-1033
neuronal stem cell6.62e-1033
neuroblast6.62e-1033
electrically signaling cell6.62e-1033
electrically responsive cell1.53e-0739
electrically active cell1.53e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.20e-2754
gray matter1.16e-2434
neural tube1.54e-2452
neural rod1.54e-2452
future spinal cord1.54e-2452
neural keel1.54e-2452
central nervous system1.74e-2473
nervous system1.84e-2375
brain2.99e-1947
future brain2.99e-1947
brain grey matter8.04e-1929
regional part of telencephalon8.04e-1929
telencephalon8.04e-1929
neurectoderm8.66e-1964
neural plate8.66e-1964
presumptive neural plate8.66e-1964
regional part of brain3.07e-1846
ectoderm-derived structure2.29e-1795
ectoderm2.29e-1795
presumptive ectoderm2.29e-1795
anterior neural tube4.81e-1640
ecto-epithelium5.63e-1673
regional part of forebrain4.06e-1539
forebrain4.06e-1539
future forebrain4.06e-1539
occipital lobe1.79e-1410
visual cortex1.79e-1410
neocortex1.79e-1410
pre-chordal neural plate1.62e-1249
regional part of cerebral cortex2.71e-1217
cerebral cortex6.96e-1121
cerebral hemisphere6.96e-1121
pallium6.96e-1121
basal ganglion8.04e-108
nuclear complex of neuraxis8.04e-108
aggregate regional part of brain8.04e-108
collection of basal ganglia8.04e-108
cerebral subcortex8.04e-108
structure with developmental contribution from neural crest1.08e-0992
posterior neural tube2.05e-0912
chordal neural plate2.05e-0912
spinal cord2.77e-086
dorsal region element2.77e-086
dorsum2.77e-086
regional part of spinal cord2.15e-075
gray matter of spinal cord2.15e-075
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