FFCP PHASE1:Mm9::chr2:102240542..102240553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80985 | |EntrezGene=80985 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=F7B7X2 | |UniProt=F7B7X2 | ||
|association_with_transcript=-128bp_to_ENSMUST00000152929_5end | |association_with_transcript=-128bp_to_ENSMUST00000152929_5end | ||
|cluster_id=chr2:102240542..102240553,- | |||
|description=CAGE_peak_6_at_Trim44_5end | |description=CAGE_peak_6_at_Trim44_5end | ||
|id=chr2:102240542..102240553,- | |id=chr2:102240542..102240553,- | ||
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0002319!3.49e-07!43;CL:0000393!4.72e-07!39;CL:0000211!4.72e-07!39;CL:0000221!6.00e-07!44;CL:0000133!6.00e-07!44 | |ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0002319!3.49e-07!43;CL:0000393!4.72e-07!39;CL:0000211!4.72e-07!39;CL:0000221!6.00e-07!44;CL:0000133!6.00e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-27,23;CL:0000337,1.63e-27,23;CL:0000540,7.73e-18,33;CL:0000047,7.73e-18,33;CL:0000031,7.73e-18,33;CL:0000404,7.73e-18,33;CL:0002319,5.80e-16,43;CL:0000221,1.72e-15,44;CL:0000133,1.72e-15,44;CL:0000393,2.00e-14,39;CL:0000211,2.00e-14,39;CL:0002321,1.05e-12,70;CL:0002612,8.14e-08,3;CL:0002610,1.30e-07,3;CL:0002614,5.32e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.97e-13!34;UBERON:0001049!5.31e-13!52;UBERON:0005068!5.31e-13!52;UBERON:0006241!5.31e-13!52;UBERON:0007135!5.31e-13!52;UBERON:0001017!6.25e-13!73;UBERON:0005743!6.25e-13!73;UBERON:0000073!8.43e-13!75;UBERON:0001016!8.43e-13!75;UBERON:0000955!1.46e-11!50;UBERON:0006238!1.46e-11!50;UBERON:0002616!1.48e-11!49;UBERON:0000025!5.58e-11!114;UBERON:0003080!1.04e-10!40;UBERON:0002780!1.49e-10!39;UBERON:0001890!1.49e-10!39;UBERON:0006240!1.49e-10!39;UBERON:0002346!2.03e-10!71;UBERON:0003075!2.03e-10!71;UBERON:0007284!2.03e-10!71;UBERON:0002791!2.21e-10!29;UBERON:0003528!2.21e-10!29;UBERON:0001893!2.21e-10!29;UBERON:0003056!1.65e-09!49;UBERON:0000033!2.94e-09!63;UBERON:0004111!5.85e-09!122;UBERON:0004121!7.35e-09!102;UBERON:0000924!7.35e-09!102;UBERON:0006601!7.35e-09!102;UBERON:0007811!1.09e-08!86;UBERON:0000477!3.33e-08!154;UBERON:0002021!3.49e-08!10;UBERON:0000411!3.49e-08!10;UBERON:0001950!3.49e-08!10;UBERON:0000956!7.29e-08!21;UBERON:0001869!7.29e-08!21;UBERON:0000203!7.29e-08!21;UBERON:0000475!1.46e-07!200;UBERON:0002619!3.48e-07!17;UBERON:0000153!5.08e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.00e-34,34;UBERON:0000073,1.24e-25,54;UBERON:0003528,7.61e-25,29;UBERON:0002791,7.61e-25,29;UBERON:0001893,7.61e-25,29;UBERON:0002021,2.35e-23,10;UBERON:0000411,2.35e-23,10;UBERON:0001950,2.35e-23,10;UBERON:0001017,6.35e-22,73;UBERON:0001016,3.77e-21,75;UBERON:0001049,1.95e-20,52;UBERON:0005068,1.95e-20,52;UBERON:0006241,1.95e-20,52;UBERON:0007135,1.95e-20,52;UBERON:0000956,2.45e-19,21;UBERON:0001869,2.45e-19,21;UBERON:0000203,2.45e-19,21;UBERON:0002780,3.00e-17,39;UBERON:0001890,3.00e-17,39;UBERON:0006240,3.00e-17,39;UBERON:0003080,1.06e-16,40;UBERON:0002346,1.71e-15,64;UBERON:0003075,1.71e-15,64;UBERON:0007284,1.71e-15,64;UBERON:0002619,1.90e-15,17;UBERON:0004121,3.27e-15,95;UBERON:0000924,3.27e-15,95;UBERON:0006601,3.27e-15,95;UBERON:0002616,6.57e-14,46;UBERON:0000955,1.63e-13,47;UBERON:0006238,1.63e-13,47;UBERON:0010371,7.34e-13,73;UBERON:0003056,8.99e-13,49;UBERON:0001948,1.12e-11,5;UBERON:0002315,1.12e-11,5;UBERON:0000025,2.08e-10,114;UBERON:0010314,5.98e-10,92;UBERON:0002240,1.16e-09,6;UBERON:0005174,1.16e-09,6;UBERON:0001137,1.16e-09,6;UBERON:0004111,2.77e-09,122;UBERON:0002257,8.14e-08,3;UBERON:0011216,8.18e-08,194;UBERON:0004684,1.30e-07,3;UBERON:0002275,1.30e-07,3;UBERON:0002038,5.32e-07,3;UBERON:0009663,5.32e-07,3;UBERON:0009661,5.32e-07,3;UBERON:0000125,5.32e-07,3;UBERON:0002308,5.32e-07,3 | |||
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| ||
|short_description=p6@Trim44 | |short_description=p6@Trim44 | ||
}} | }} |
Latest revision as of 21:09, 1 October 2015
Short description: | p6@Trim44 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Trim44_5end |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | -128bp_to_ENSMUST00000152929_5end |
EntrezGene: | Trim44 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.63e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-27 | 23 |
neuron | 7.73e-18 | 33 |
neuronal stem cell | 7.73e-18 | 33 |
neuroblast | 7.73e-18 | 33 |
electrically signaling cell | 7.73e-18 | 33 |
neural cell | 5.80e-16 | 43 |
ectodermal cell | 1.72e-15 | 44 |
neurectodermal cell | 1.72e-15 | 44 |
electrically responsive cell | 2.00e-14 | 39 |
electrically active cell | 2.00e-14 | 39 |
embryonic cell | 1.05e-12 | 70 |
neuron of the ventral spinal cord | 8.14e-08 | 3 |
raphe nuclei neuron | 1.30e-07 | 3 |
neuron of the substantia nigra | 5.32e-07 | 3 |