FFCP PHASE1:Mm9::chr17:36248619..36248641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000079918,uc008cke.1_5end | |association_with_transcript=0bp_to_ENSMUST00000079918,uc008cke.1_5end | ||
|cluster_id=chr17:36248619..36248641,- | |||
|description=CAGE_peak_1_at_ENSMUST00000079918_5end,CAGE_peak_1_at_uc008cke.1_5end | |description=CAGE_peak_1_at_ENSMUST00000079918_5end,CAGE_peak_1_at_uc008cke.1_5end | ||
|id=chr17:36248619..36248641,- | |id=chr17:36248619..36248641,- | ||
|ontology_enrichment_celltype=CL:0000219!1.08e-14!54;CL:0002320!2.09e-11!46;CL:0000134!2.09e-11!46;CL:0000063!3.00e-11!66;CL:0000144!9.93e-11!121;CL:0000012!9.93e-11!121;CL:0000548!2.56e-10!115;CL:0000004!2.56e-10!115;CL:0000255!2.56e-10!115;CL:0002371!4.54e-10!118;CL:0000738!7.36e-10!17;CL:0002087!7.36e-10!17;CL:0002031!1.03e-09!25;CL:0000838!2.29e-08!12;CL:0000084!1.06e-07!11;CL:0000827!1.06e-07!11;CL:0000988!1.84e-07!32;CL:0002032!1.84e-07!32;CL:0000037!1.84e-07!32;CL:0000566!1.84e-07!32;CL:0000837!1.84e-07!32;CL:0000542!2.61e-07!13;CL:0000051!2.61e-07!13;CL:0000791!4.71e-07!9;CL:0000789!4.71e-07!9;CL:0002420!4.71e-07!9;CL:0002419!4.71e-07!9;CL:0000790!4.71e-07!9;CL:0000723!9.08e-07!91;CL:0000048!9.08e-07!91 | |ontology_enrichment_celltype=CL:0000219!1.08e-14!54;CL:0002320!2.09e-11!46;CL:0000134!2.09e-11!46;CL:0000063!3.00e-11!66;CL:0000144!9.93e-11!121;CL:0000012!9.93e-11!121;CL:0000548!2.56e-10!115;CL:0000004!2.56e-10!115;CL:0000255!2.56e-10!115;CL:0002371!4.54e-10!118;CL:0000738!7.36e-10!17;CL:0002087!7.36e-10!17;CL:0002031!1.03e-09!25;CL:0000838!2.29e-08!12;CL:0000084!1.06e-07!11;CL:0000827!1.06e-07!11;CL:0000988!1.84e-07!32;CL:0002032!1.84e-07!32;CL:0000037!1.84e-07!32;CL:0000566!1.84e-07!32;CL:0000837!1.84e-07!32;CL:0000542!2.61e-07!13;CL:0000051!2.61e-07!13;CL:0000791!4.71e-07!9;CL:0000789!4.71e-07!9;CL:0002420!4.71e-07!9;CL:0002419!4.71e-07!9;CL:0000790!4.71e-07!9;CL:0000723!9.08e-07!91;CL:0000048!9.08e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,6.93e-18,54;CL:0002320,2.75e-17,46;CL:0000134,2.75e-17,46;CL:0000738,2.33e-15,17;CL:0002087,2.33e-15,17;CL:0002031,2.52e-14,25;CL:0000838,1.84e-11,12;CL:0000473,1.76e-10,7;CL:0000791,1.83e-10,9;CL:0000789,1.83e-10,9;CL:0002420,1.83e-10,9;CL:0002419,1.83e-10,9;CL:0000790,1.83e-10,9;CL:0000542,2.14e-10,13;CL:0000051,2.14e-10,13;CL:0000084,3.57e-10,11;CL:0000827,3.57e-10,11;CL:0000988,3.58e-10,32;CL:0002032,3.58e-10,32;CL:0000037,3.58e-10,32;CL:0000837,3.58e-10,32;CL:0000624,2.91e-09,8;CL:0000723,2.12e-08,91;CL:0000048,2.12e-08,91;CL:0000034,2.11e-07,97;CL:0000239,3.06e-07,6;CL:0000677,3.06e-07,6;CL:0000584,3.06e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.52e-15!48;UBERON:0002405!4.52e-15!70;UBERON:0002390!4.75e-14!45;UBERON:0003061!4.75e-14!45;UBERON:0002384!2.09e-11!46;UBERON:0003929!1.32e-09!55;UBERON:0000490!3.54e-09!66;UBERON:0004177!6.47e-09!29;UBERON:0005057!9.41e-09!51;UBERON:0002370!2.45e-08!23;UBERON:0000974!2.45e-08!23;UBERON:0004807!2.45e-08!23;UBERON:0005058!2.45e-08!23;UBERON:0003351!2.45e-08!23;UBERON:0009113!2.45e-08!23;UBERON:0003295!2.45e-08!23;UBERON:0009722!2.45e-08!23;UBERON:0005562!2.45e-08!23;UBERON:0007690!2.45e-08!23;UBERON:0006562!1.19e-07!24;UBERON:0003408!1.19e-07!24;UBERON:0001557!1.19e-07!24;UBERON:0001042!1.19e-07!24;UBERON:0008814!1.19e-07!24;UBERON:0009145!1.19e-07!24;UBERON:0005911!4.62e-07!69;UBERON:0000063!9.76e-07!35 | |ontology_enrichment_uberon=UBERON:0002193!2.52e-15!48;UBERON:0002405!4.52e-15!70;UBERON:0002390!4.75e-14!45;UBERON:0003061!4.75e-14!45;UBERON:0002384!2.09e-11!46;UBERON:0003929!1.32e-09!55;UBERON:0000490!3.54e-09!66;UBERON:0004177!6.47e-09!29;UBERON:0005057!9.41e-09!51;UBERON:0002370!2.45e-08!23;UBERON:0000974!2.45e-08!23;UBERON:0004807!2.45e-08!23;UBERON:0005058!2.45e-08!23;UBERON:0003351!2.45e-08!23;UBERON:0009113!2.45e-08!23;UBERON:0003295!2.45e-08!23;UBERON:0009722!2.45e-08!23;UBERON:0005562!2.45e-08!23;UBERON:0007690!2.45e-08!23;UBERON:0006562!1.19e-07!24;UBERON:0003408!1.19e-07!24;UBERON:0001557!1.19e-07!24;UBERON:0001042!1.19e-07!24;UBERON:0008814!1.19e-07!24;UBERON:0009145!1.19e-07!24;UBERON:0005911!4.62e-07!69;UBERON:0000063!9.76e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.81e-19,48;UBERON:0002405,1.81e-19,48;UBERON:0002390,5.04e-18,45;UBERON:0003061,5.04e-18,45;UBERON:0002384,2.75e-17,46;UBERON:0002370,1.67e-12,23;UBERON:0000974,1.67e-12,23;UBERON:0004807,1.67e-12,23;UBERON:0005058,1.67e-12,23;UBERON:0003351,1.67e-12,23;UBERON:0009113,1.67e-12,23;UBERON:0003295,1.67e-12,23;UBERON:0009722,1.67e-12,23;UBERON:0005562,1.67e-12,23;UBERON:0007690,1.67e-12,23;UBERON:0006562,8.24e-12,24;UBERON:0003408,8.24e-12,24;UBERON:0001557,8.24e-12,24;UBERON:0001042,8.24e-12,24;UBERON:0008814,8.24e-12,24;UBERON:0009145,8.24e-12,24;UBERON:0003929,3.54e-11,55;UBERON:0000490,8.77e-11,66;UBERON:0004177,2.76e-10,29;UBERON:0005057,2.76e-10,29;UBERON:0000072,4.79e-10,27;UBERON:0000344,4.86e-09,15;UBERON:0002371,1.07e-08,16;UBERON:0000077,8.27e-08,35;UBERON:0005911,1.36e-07,69;UBERON:0003081,3.43e-07,87;UBERON:0001242,4.69e-07,13;UBERON:0001262,4.69e-07,13;UBERON:0004786,4.69e-07,13 | |||
|phase1_expression=0,3.48975407639361,2.72999543633722,5.74682001482977,6.01074875935617,0,3.50418960893289,9.29687928779349,1.97104211012333,1.87251621057595,1.54096171402954,0.957265907944037,4.10881751834894,6.29426897416781,0,0.607425802169478,0.699561878128147,3.62781490161973,2.4680598049033,1.69755860719212,0.935476191661768,0.496454756004426,1.30599894569468,2.55987876469451,1.37645568640302,4.01962374880514,2.15380998079537,1.939241094173,4.75058548640935,1.26015064879965,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,1.0470474879476,0,0,0,0.251793635951155,0.304130793658544,0,8.60630478782843,0.436050312760893,0.878744730937887,0.777719596297134,2.51975558925653,1.43752564364972,2.85230430298152,2.90144856804538,2.35265659399725,0.257259436035947,1.14613375975503,1.54701627683233,0,0,0,1.0165335962074,2.66788438833342,22.497492932035,37.576921777545,31.9716051725745,4.19440154725767,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,1.06958773443767,0,0,0.186399445825301,0.227178579999552,0.831287161174641,0.869593466105033,3.44169550792555,9.51959867190851,9.71465744948071,0,1.34408066129201,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,1.27728527604296,0.11981512450592,0,0.508280908292259,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,3.30418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.370191491765402,0.889357881261447,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,3.01582567878545,2.71952841909355,0.491764273019036,0,0.160550589987792,0,0.819674726883377,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,1.16902343164525,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0.354680467284547,0,0,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0,0.410082683163076,1.14389086603261,0.509935289981566,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.202725215290164,0.102710957164827,1.55904987573354,1.43221356533985,1.58945083825012,2.40390899039938,1.77227432609493,2.3222283488074,2.362411006305,2.21817607301049,1.07203668813728,1.34696578296461,0.935015217452552,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 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|phase1_expression=0,3.48975407639361,2.72999543633722,5.74682001482977,6.01074875935617,0,3.50418960893289,9.29687928779349,1.97104211012333,1.87251621057595,1.54096171402954,0.957265907944037,4.10881751834894,6.29426897416781,0,0.607425802169478,0.699561878128147,3.62781490161973,2.4680598049033,1.69755860719212,0.935476191661768,0.496454756004426,1.30599894569468,2.55987876469451,1.37645568640302,4.01962374880514,2.15380998079537,1.939241094173,4.75058548640935,1.26015064879965,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,1.0470474879476,0,0,0,0.251793635951155,0.304130793658544,0,8.60630478782843,0.436050312760893,0.878744730937887,0.777719596297134,2.51975558925653,1.43752564364972,2.85230430298152,2.90144856804538,2.35265659399725,0.257259436035947,1.14613375975503,1.54701627683233,0,0,0,1.0165335962074,2.66788438833342,22.497492932035,37.576921777545,31.9716051725745,4.19440154725767,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,1.06958773443767,0,0,0.186399445825301,0.227178579999552,0.831287161174641,0.869593466105033,3.44169550792555,9.51959867190851,9.71465744948071,0,1.34408066129201,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,1.86391761218122,0,0,1.27728527604296,0.11981512450592,0,0.508280908292259,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,3.30418782983798,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0.295220295959204,0.156998727841375,0.370191491765402,0.889357881261447,0,0,0,0,0,0.25462585178142,0,0,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,3.01582567878545,2.71952841909355,0.491764273019036,0,0.160550589987792,0,0.819674726883377,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,1.16902343164525,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,0.354680467284547,0,0,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0,0.410082683163076,1.14389086603261,0.509935289981566,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0.202725215290164,0.102710957164827,1.55904987573354,1.43221356533985,1.58945083825012,2.40390899039938,1.77227432609493,2.3222283488074,2.362411006305,2.21817607301049,1.07203668813728,1.34696578296461,0.935015217452552,0,0,0,0,0.386379188064381,0.563047426353546,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000079918,p1@uc008cke.1 | |short_description=p1@ENSMUST00000079918,p1@uc008cke.1 | ||
}} | }} |
Latest revision as of 20:39, 4 August 2015
Short description: | p1@ENSMUST00000079918, p1@uc008cke.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000079918_5end, CAGE_peak_1_at_uc008cke.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000079918, uc008cke.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 6.93e-18 | 54 |
connective tissue cell | 2.75e-17 | 46 |
mesenchymal cell | 2.75e-17 | 46 |
leukocyte | 2.33e-15 | 17 |
nongranular leukocyte | 2.33e-15 | 17 |
hematopoietic lineage restricted progenitor cell | 2.52e-14 | 25 |
lymphoid lineage restricted progenitor cell | 1.84e-11 | 12 |
defensive cell | 1.76e-10 | 7 |
mature alpha-beta T cell | 1.83e-10 | 9 |
alpha-beta T cell | 1.83e-10 | 9 |
immature T cell | 1.83e-10 | 9 |
mature T cell | 1.83e-10 | 9 |
immature alpha-beta T cell | 1.83e-10 | 9 |
lymphocyte | 2.14e-10 | 13 |
common lymphoid progenitor | 2.14e-10 | 13 |
T cell | 3.57e-10 | 11 |
pro-T cell | 3.57e-10 | 11 |
hematopoietic cell | 3.58e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.58e-10 | 32 |
hematopoietic stem cell | 3.58e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.58e-10 | 32 |
CD4-positive, alpha-beta T cell | 2.91e-09 | 8 |
somatic stem cell | 2.12e-08 | 91 |
multi fate stem cell | 2.12e-08 | 91 |
stem cell | 2.11e-07 | 97 |
brush border epithelial cell | 3.06e-07 | 6 |
gut absorptive cell | 3.06e-07 | 6 |
enterocyte | 3.06e-07 | 6 |