FF:11536-120A6: Difference between revisions

Revision as of 21:21, 9 July 2012

Name:	Mesenchymal Stem Cells - bone marrow, donor1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	bone marrow
dev stage	NA
sex	NA
age	NA
cell type	mesenchymal stem cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	SC7505
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0916
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.183
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0994
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0994
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0693
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.384
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.131
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.127
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.18
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0484
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0348
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.597
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.633
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0994
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0578
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.307
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.223
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.477
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11344

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.471
MA0003.1	MA0003.1	0.366
MA0004.1	MA0004.1	0.574
MA0006.1	MA0006.1	0.309
MA0007.1	MA0007.1	0.017
MA0009.1	MA0009.1	0.424
MA0014.1	MA0014.1	0.899
MA0017.1	MA0017.1	0.194
MA0018.2	MA0018.2	0.0374
MA0019.1	MA0019.1	0.449
MA0024.1	MA0024.1	0.0107
MA0025.1	MA0025.1	0.0758
MA0027.1	MA0027.1	0.468
MA0028.1	MA0028.1	0.31
MA0029.1	MA0029.1	0.168
MA0030.1	MA0030.1	9.05722e-4
MA0031.1	MA0031.1	2.83655e-4
MA0035.2	MA0035.2	0.84
MA0038.1	MA0038.1	2.42735e-4
MA0039.2	MA0039.2	0.456
MA0040.1	MA0040.1	0.776
MA0041.1	MA0041.1	0.44
MA0042.1	MA0042.1	0.802
MA0043.1	MA0043.1	8.73383e-4
MA0046.1	MA0046.1	0.0805
MA0047.2	MA0047.2	0.0934
MA0048.1	MA0048.1	0.0508
MA0050.1	MA0050.1	1.53536e-9
MA0051.1	MA0051.1	9.1648e-6
MA0052.1	MA0052.1	0.528
MA0055.1	MA0055.1	0.00162
MA0057.1	MA0057.1	0.243
MA0058.1	MA0058.1	0.611
MA0059.1	MA0059.1	0.214
MA0060.1	MA0060.1	5.29872e-12
MA0061.1	MA0061.1	0.882
MA0062.2	MA0062.2	0.598
MA0065.2	MA0065.2	0.135
MA0066.1	MA0066.1	0.116
MA0067.1	MA0067.1	0.00577
MA0068.1	MA0068.1	0.425
MA0069.1	MA0069.1	0.0869
MA0070.1	MA0070.1	0.0145
MA0071.1	MA0071.1	0.0888
MA0072.1	MA0072.1	0.345
MA0073.1	MA0073.1	0.809
MA0074.1	MA0074.1	0.719
MA0076.1	MA0076.1	0.985
MA0077.1	MA0077.1	0.601
MA0078.1	MA0078.1	0.735
MA0079.2	MA0079.2	0.892
MA0080.2	MA0080.2	3.85109e-6
MA0081.1	MA0081.1	0.00875
MA0083.1	MA0083.1	0.0087
MA0084.1	MA0084.1	0.889
MA0087.1	MA0087.1	0.914
MA0088.1	MA0088.1	0.0288
MA0090.1	MA0090.1	0.0913
MA0091.1	MA0091.1	0.335
MA0092.1	MA0092.1	0.558
MA0093.1	MA0093.1	0.657
MA0099.2	MA0099.2	0.00599
MA0100.1	MA0100.1	0.542
MA0101.1	MA0101.1	0.26
MA0102.2	MA0102.2	1.49661e-6
MA0103.1	MA0103.1	0.0429
MA0104.2	MA0104.2	0.743
MA0105.1	MA0105.1	0.377
MA0106.1	MA0106.1	0.0897
MA0107.1	MA0107.1	0.125
MA0108.2	MA0108.2	0.0174
MA0111.1	MA0111.1	0.394
MA0112.2	MA0112.2	0.0144
MA0113.1	MA0113.1	0.0422
MA0114.1	MA0114.1	0.0624
MA0115.1	MA0115.1	0.92
MA0116.1	MA0116.1	0.135
MA0117.1	MA0117.1	0.54
MA0119.1	MA0119.1	0.161
MA0122.1	MA0122.1	0.74
MA0124.1	MA0124.1	0.01
MA0125.1	MA0125.1	0.132
MA0131.1	MA0131.1	0.785
MA0135.1	MA0135.1	0.286
MA0136.1	MA0136.1	9.23987e-6
MA0137.2	MA0137.2	0.221
MA0138.2	MA0138.2	0.349
MA0139.1	MA0139.1	0.558
MA0140.1	MA0140.1	0.337
MA0141.1	MA0141.1	0.0503
MA0142.1	MA0142.1	0.398
MA0143.1	MA0143.1	0.75
MA0144.1	MA0144.1	0.643
MA0145.1	MA0145.1	0.325
MA0146.1	MA0146.1	0.034
MA0147.1	MA0147.1	0.564
MA0148.1	MA0148.1	0.28
MA0149.1	MA0149.1	0.381
MA0150.1	MA0150.1	0.812
MA0152.1	MA0152.1	0.371
MA0153.1	MA0153.1	0.397
MA0154.1	MA0154.1	0.178
MA0155.1	MA0155.1	0.239
MA0156.1	MA0156.1	0.0223
MA0157.1	MA0157.1	0.0419
MA0159.1	MA0159.1	0.811
MA0160.1	MA0160.1	0.251
MA0162.1	MA0162.1	0.212
MA0163.1	MA0163.1	0.0379
MA0164.1	MA0164.1	0.919
MA0258.1	MA0258.1	0.23
MA0259.1	MA0259.1	0.825

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11344

Novel motif	Logo	P-value
1	1	0.506
10	10	0.802
100	100	0.381
101	101	0.664
102	102	0.609
103	103	0.414
104	104	0.393
105	105	0.205
106	106	0.794
107	107	0.0908
108	108	0.915
109	109	0.0123
11	11	0.0251
110	110	0.0571
111	111	0.602
112	112	0.653
113	113	0.661
114	114	0.767
115	115	0.395
116	116	0.0321
117	117	0.37
118	118	0.771
119	119	0.815
12	12	0.598
120	120	0.188
121	121	0.327
122	122	0.636
123	123	0.00605
124	124	0.624
125	125	0.894
126	126	0.585
127	127	0.638
128	128	0.794
129	129	0.856
13	13	0.205
130	130	0.0074
131	131	0.367
132	132	0.26
133	133	0.403
134	134	0.0532
135	135	0.917
136	136	0.986
137	137	0.0594
138	138	0.175
139	139	0.231
14	14	0.926
140	140	0.677
141	141	0.426
142	142	0.203
143	143	0.273
144	144	0.756
145	145	0.446
146	146	0.0249
147	147	0.281
148	148	0.734
149	149	0.435
15	15	0.913
150	150	0.302
151	151	0.637
152	152	0.314
153	153	0.178
154	154	0.14
155	155	0.65
156	156	0.585
157	157	0.747
158	158	0.132
159	159	0.493
16	16	0.314
160	160	0.0178
161	161	0.278
162	162	0.444
163	163	0.319
164	164	0.807
165	165	0.645
166	166	0.826
167	167	0.417
168	168	0.737
169	169	0.0745
17	17	0.459
18	18	0.241
19	19	0.0353
2	2	0.661
20	20	0.755
21	21	0.337
22	22	0.0778
23	23	0.92
24	24	0.659
25	25	0.921
26	26	0.0439
27	27	0.481
28	28	0.0981
29	29	0.552
3	3	0.353
30	30	0.159
31	31	0.471
32	32	0.00475
33	33	0.194
34	34	0.264
35	35	0.633
36	36	0.291
37	37	0.147
38	38	0.422
39	39	0.339
4	4	0.402
40	40	0.0278
41	41	0.544
42	42	0.556
43	43	0.35
44	44	0.357
45	45	0.473
46	46	0.0817
47	47	0.0756
48	48	0.0786
49	49	0.191
5	5	0.896
50	50	0.149
51	51	0.466
52	52	0.786
53	53	0.431
54	54	0.645
55	55	0.806
56	56	0.195
57	57	0.336
58	58	0.327
59	59	0.0287
6	6	0.625
60	60	0.66
61	61	0.503
62	62	0.421
63	63	0.113
64	64	0.117
65	65	0.0932
66	66	0.023
67	67	0.823
68	68	0.0762
69	69	0.0998
7	7	0.587
70	70	0.438
71	71	0.0634
72	72	0.625
73	73	0.0761
74	74	0.864
75	75	0.438
76	76	0.207
77	77	0.0719
78	78	0.965
79	79	0.858
8	8	0.0322
80	80	0.726
81	81	0.973
82	82	0.908
83	83	0.56
84	84	0.499
85	85	0.424
86	86	0.703
87	87	0.133
88	88	0.284
89	89	0.0649
9	9	0.416
90	90	0.126
91	91	0.173
92	92	0.685
93	93	0.61
94	94	0.486
95	95	0.113
96	96	0.556
97	97	0.771
98	98	0.658
99	99	2.84549e-5

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11344

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000097 human mesenchymal stem cell of bone marrow sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002092 (bone marrow cell)
0002540 (mesenchymal stem cell of the bone marrow)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000097 (human mesenchymal stem cell of bone marrow sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr7:19157248..19157268,-!p1@TWIST1!1.94!227.11!TWIST1;;chr14:61116183..61116208,-!p1@SIX1!1.66!162.56!SIX1;;chr12:66218255..66218304,+!p3@HMGA2!1.57!94.91!HMGA2;;chr6:34204921..34204939,+!p3@HMGA1!1.50!873.73!HMGA1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.46!27.52!HOXC5;;chr7:27205136..27205164,-!p1@HOXA9!1.45!27.01!HOXA9;;chr5:134369905..134369972,-!p1@PITX1!1.35!32.15!PITX1;;chr7:96654133..96654150,-!p1@DLX5!1.32!19.80!DLX5;;chr6:45296048..45296082,+!p1@RUNX2!1.30!21.61!RUNX2;;chr1:170633348..170633399,+!p2@PRRX1!1.27!24.18!PRRX1;;chr1:170632285..170632309,+!p1@PRRX1!1.27!20.06!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.26!87.19!CREB3L1;;chr17:59477233..59477263,+!p1@TBX2!1.26!52.98!TBX2;;chr7:27213893..27213954,-!p1@HOXA10!1.25!16.72!HOXA10;;chr12:54380404..54380433,+!p3@HOXC10!1.24!16.46!HOXC10;;chr11:65686802..65686818,+!p6@DRAP1!1.21!26.24!DRAP1;;chr12:66218212..66218244,+!p5@HMGA2!1.19!21.09!HMGA2;;chr16:86600426..86600441,+!p1@FOXC2!1.18!34.72!FOXC2;;chr12:54379029..54379057,+!p2@HOXC10!1.18!14.15!HOXC10;;chr7:27224795..27224840,-!p2@HOXA11!1.17!13.63!HOXA11;;chr7:27224842..27224872,-!p1@HOXA11!1.17!13.63!HOXA11;;chr12:66218598..66218645,+!p2@HMGA2!1.16!62.24!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!1.13!23.92!HMGA2;;chr9:132427972..132428056,+!p1@PRRX2!1.12!15.95!PRRX2;;chr11:46299539..46299620,+!p2@CREB3L1!1.11!20.06!CREB3L1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!1.11!12.86!GLIS1;;chr4:174451370..174451387,-!p1@HAND2!1.07!10.80!HAND2;;chr12:54380036..54380091,+!p4@HOXC10!1.05!10.29!HOXC10;;chr16:54320101..54320125,-!p4@IRX3!1.03!13.89!IRX3;;chr12:54378923..54378966,+!p1@HOXC10!1.03!9.77!HOXC10;;chr8:49833948..49833973,-!p2@SNAI2!1.02!60.70!SNAI2;;chr12:53614115..53614154,-!p1@RARG!1.02!50.93!RARG;;chr11:65686732..65686756,+!p2@DRAP1!1.02!40.38!DRAP1;;chr7:27196217..27196246,-!p2@HOXA7!1.01!9.26!HOXA7;;chr6:34204672..34204692,+!p1@HMGA1!1.00!1034.23!HMGA1;;chr7:27205106..27205134,-!p2@HOXA9!1.00!9.00!HOXA9;;chr11:65687362..65687436,+!p3@DRAP1!0.98!39.87!DRAP1;;chr12:54393880..54393962,+!p1@HOXC9!0.98!8.49!HOXC9;;chr2:200322654..200322707,-!p2@SATB2!0.95!11.83!SATB2;;chr9:132427883..132427951,+!p2@PRRX2!0.95!7.97!PRRX2;;chr11:65686952..65686975,+!p5@DRAP1!0.94!43.73!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!0.93!19.55!TWIST1;;chr17:59477197..59477212,+!p2@TBX2!0.93!13.37!TBX2;;chr12:66218378..66218401,+!p6@HMGA2!0.93!11.83!HMGA2;;chr5:134369879..134369898,-!p2@PITX1!0.93!7.46!PITX1;;chr7:27192185..27192209,-!p1@HOXA3!0.93!7.46!HOXA3;;chr7:96654026..96654061,-!p2@DLX5!0.93!7.46!DLX5;;chr12:66218836..66218888,+!p1@HMGA2!0.91!69.70!HMGA2;;chr2:5832508..5832524,+!p1@SOX11!0.91!7.20!SOX11;;chr2:85981107..85981120,+!p3@ATOH8!0.91!7.20!ATOH8;;chr8:49833978..49833996,-!p1@SNAI2!0.90!150.21!SNAI2;;chr1:170632959..170632987,+!p4@PRRX1!0.90!7.72!PRRX1;;chr16:54320617..54320643,-!p3@IRX3!0.88!8.49!IRX3;;chr4:174450089..174450153,-!p2@HAND2!0.87!6.43!HAND2;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.87!6.43!HOXC5;;chr14:61116168..61116180,-!p2@SIX1!0.86!7.20!SIX1;;chr19:47523058..47523114,+!p1@NPAS1!0.86!6.17!NPAS1;;chr17:59477275..59477286,+!p3@TBX2!0.84!7.97!TBX2;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.92!KDM5D;;chr5:92918919..92918942,+!p1@NR2F1!0.83!27.52!NR2F1;;chr2:85981222..85981259,+!p2@ATOH8!0.83!9.77!ATOH8;;chr2:85980951..85981004,+!p1@ATOH8!0.82!9.52!ATOH8;;chr2:176994408..176994492,+!p1@HOXD8!0.82!5.66!HOXD8;;chr3:157823517..157823562,-!p1@SHOX2!0.81!5.92!SHOX2;;chr4:299227..299272,-!p1@ZNF732!0.81!5.40!ZNF732;;chr20:30193083..30193098,+!p1@ID1!0.80!465.55!ID1;;chr1:23885981..23886002,-!p1@ID3!0.79!989.99!ID3;;chr6:31126291..31126399,+!p1@TCF19!0.79!53.50!TCF19;;chr16:54964740..54964789,+!p1@IRX5!0.79!7.72!IRX5;;chr20:50721803..50721857,-!p2@ZFP64!0.78!8.23!ZFP64;;chr16:54320646..54320672,-!p2@IRX3!0.77!7.72!IRX3;;chr16:54320158..54320200,-!p5@IRX3!0.77!7.20!IRX3;;chr6:85473156..85473210,-!p2@TBX18!0.77!6.17!TBX18;;chr12:54394309..54394336,+!p2@HOXC9!0.77!4.89!HOXC9;;chr2:85981027..85981047,+!p8@ATOH8!0.77!4.89!ATOH8;;chr2:85981073..85981091,+!p5@ATOH8!0.75!4.63!ATOH8;;chr6:134210243..134210257,+!p1@TCF21!0.75!4.63!TCF21;;chr12:54378984..54378996,+!p7@HOXC10!0.75!4.63!HOXC10;;chr5:176738887..176738934,-!p1@MXD3!0.74!33.18!MXD3;;chr5:321810..321877,+!p1@AHRR!0.74!15.69!AHRR;;chr16:54320675..54320715,-!p1@IRX3!0.74!10.29!IRX3;;chr11:65687222..65687240,+!p7@DRAP1!0.74!5.92!DRAP1;;chr2:239756739..239756755,+!p2@TWIST2!0.73!7.97!TWIST2;;chr19:13134772..13134822,+!p2@NFIX!0.73!6.69!NFIX;;chr11:65687243..65687276,+!p8@DRAP1!0.73!6.17!DRAP1;;chr1:170633262..170633285,+!p3@PRRX1!0.73!5.14!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.73!4.37!PRRX1;;chr1:25291475..25291511,-!p2@RUNX3!0.73!4.37!RUNX3;;chr4:109089095..109089144,-!p6@LEF1!0.73!4.37!LEF1;;chr9:77112244..77112262,+!p1@RORB!0.72!4.89!RORB;;chr19:44037546..44037594,+!p1@ZNF575!0.71!9.26!ZNF575;;chr15:57511609..57511651,+!p2@TCF12!0.70!7.20!TCF12;;chr11:65667846..65667868,-!p1@FOSL1!0.69!117.29!FOSL1;;chr19:13134457..13134462,+!p5@NFIX!0.69!7.46!NFIX;;chr12:54447599..54447630,+!p3@HOXC4!0.69!4.89!HOXC4;;chr12:54380112..54380126,+!p5@HOXC10!0.69!3.86!HOXC10;;chr12:54402745..54402788,+!p1@HOXC8!0.69!3.86!HOXC8;;chr19:46801639..46801699,+!p1@HIF3A!0.69!3.86!HIF3A;;chr2:172967242..172967265,-!p2@DLX2!0.69!3.86!DLX2;;chr11:65687158..65687216,+!p4@DRAP1!0.68!24.95!DRAP1;;chr19:45260775..45260838,+!p5@BCL3!0.68!5.14!BCL3;;chr12:2986275..2986363,-!p1@FOXM1!0.67!42.18!FOXM1;;chr11:47279504..47279563,+!p1@NR1H3!0.67!9.26!NR1H3;;chr19:38720294..38720348,-!p1@DPF1!0.66!4.63!DPF1;;chr2:45236540..45236577,-!p1@SIX2!0.66!3.60!SIX2;;chr7:27196267..27196311,-!p1@HOXA7!0.66!3.60!HOXA7;;chr11:65667884..65667895,-!p2@FOSL1!0.65!15.43!FOSL1;;chr2:19558373..19558392,-!p1@OSR1!0.65!10.55!OSR1;;chr20:42295745..42295765,+!p1@MYBL2!0.64!64.82!MYBL2;;chr12:2986206..2986258,-!p2@FOXM1!0.64!23.66!FOXM1;;chr20:42295713..42295738,+!p2@MYBL2!0.64!23.15!MYBL2;;chr5:72744594..72744609,-!p1@FOXD1!0.64!17.75!FOXD1;;chr19:9609272..9609297,-!p1@ZNF560!0.64!3.34!ZNF560;;chr1:40105299..40105326,-!p1@HEYL!0.64!3.34!HEYL;;chr2:172949484..172949522,+!p1@DLX1!0.64!3.34!DLX1;;chr16:86600870..86600921,+!p2@FOXC2!0.64!3.34!FOXC2;;chr7:44143925..44143970,+!p1@AEBP1!0.63!85.91!AEBP1;;chr2:239756671..239756732,+!p1@TWIST2!0.63!12.09!TWIST2;;chr3:12329397..12329433,+!p2@PPARG!0.63!8.23!PPARG;;chr6:34204973..34204990,+!p4@HMGA1!0.62!50.93!HMGA1;;chr12:7079780..7079791,-!p2@PHB2!0.62!19.55!PHB2;;chr11:63684602..63684664,-!p1@RCOR2!0.62!6.94!RCOR2;;chr1:247171347..247171366,-!p2@ZNF695!0.62!6.43!ZNF695;;chr12:66218573..66218596,+!p7@HMGA2!0.61!4.89!HMGA2;;chr2:85980919..85980942,+!p4@ATOH8!0.61!3.34!ATOH8;;chr16:86600458..86600461,+!p3@FOXC2!0.61!3.09!FOXC2;;chr17:41622731..41622764,-!p5@ETV4!0.61!3.09!ETV4;;chr7:27183263..27183284,-!p2@HOXA5!0.61!3.09!HOXA5;;chr12:54394059..54394088,+!p3@HOXC9!0.61!3.09!HOXC9;;chr12:54410948..54410992,+!p3@HOXC5!0.61!3.09!HOXC5;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.09!HMGA2;;chr11:65686855..65686946,+!p1@DRAP1!0.59!267.75!DRAP1;;chr14:75988771..75988826,+!p1@BATF!0.59!4.12!BATF;;chr8:77593474..77593612,+!p1@ZFHX4!0.58!14.15!ZFHX4;;chr7:27183291..27183324,-!p1@HOXA5!0.58!2.83!HOXA5;;chr7:27212501..27212513,-!p5@HOXA10!0.58!2.83!HOXA10;;chr2:45236579..45236596,-!p2@SIX2!0.58!2.83!SIX2;;chr2:85981008..85981025,+!p7@ATOH8!0.58!2.83!ATOH8;;chr17:59477403..59477414,+!p4@TBX2!0.58!2.83!TBX2;;chr17:41623692..41623715,-!p1@ETV4!0.57!13.89!ETV4;;chr2:121493425..121493474,+!p1@GLI2!0.57!6.94!GLI2;;chr17:41623009..41623053,-!p4@ETV4!0.57!4.89!ETV4;;chr1:8938766..8938774,-!p2@ENO1!0.56!226.86!ENO1;;chr15:96874012..96874042,+!p2@NR2F2!0.56!29.58!NR2F2;;chr19:1592714..1592762,-!p1@MBD3!0.56!24.69!MBD3;;chr2:172967621..172967637,-!p1@DLX2!0.56!8.23!DLX2;;chr5:158526917..158526932,-!p1@EBF1!0.56!7.72!EBF1;;chr6:1610293..1610310,+!p1@FOXC1!0.56!4.89!FOXC1;;chr12:66218443..66218461,+!p8@HMGA2!0.56!3.60!HMGA2;;chr17:47492252..47492265,-!p2@PHB!0.55!12.86!PHB;;chr7:42276787..42276815,-!p1@GLI3!0.55!7.97!GLI3;;chr2:214015111..214015179,-!p1@IKZF2!0.55!5.14!IKZF2;;chr12:66218152..66218174,+!p10@HMGA2!0.55!2.83!HMGA2;;chr12:54394416..54394467,+!p5@HOXC9!0.55!2.57!HOXC9;;chr1:119530706..119530736,-!p3@TBX15!0.55!2.57!TBX15;;chr1:170632439..170632465,+!p11@PRRX1!0.55!2.57!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.55!2.57!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.55!2.57!PRRX1;;chr1:170633245..170633256,+!p14@PRRX1!0.55!2.57!PRRX1;;chr15:67391010..67391046,+!p13@SMAD3!0.55!2.57!SMAD3;;chr16:54320280..54320291,-!p9@IRX3!0.55!2.57!IRX3;;chr16:54320302..54320317,-!p10@IRX3!0.55!2.57!IRX3;;chr2:85980768..85980783,+!p10@ATOH8!0.55!2.57!ATOH8;;chr15:67357924..67357952,+!p2@SMAD3!0.54!20.58!SMAD3;;chr1:8484314..8484348,-!p7@RERE!0.54!7.97!RERE;;chr3:12329358..12329393,+!p3@PPARG!0.54!7.20!PPARG;;chr2:169312600..169312606,+!p2@CERS6!0.54!4.37!CERS6;;chr8:60031809..60031835,-!p4@TOX!0.54!3.34!TOX;;chr1:8938709..8938720,-!p3@ENO1!0.53!147.89!ENO1;;chr1:8483878..8483907,-!p4@RERE!0.53!11.32!RERE;;chr2:200323414..200323455,-!p1@SATB2!0.53!5.92!SATB2;;chr2:71127699..71127744,+!p1@VAX2!0.53!5.66!VAX2;;chr6:85474299..85474324,-!p1@TBX18!0.53!4.89!TBX18;;chr11:113930291..113930339,+!p2@ZBTB16!0.53!4.37!ZBTB16;;chr12:54447637..54447659,+!p4@HOXC4!0.52!2.31!HOXC4;;chr5:2751762..2751784,-!p1@IRX2!0.52!2.31!IRX2;;chr7:27196196..27196210,-!p5@HOXA7!0.52!2.31!HOXA7;;chr7:27224911..27224922,-!p5@HOXA11!0.52!2.31!HOXA11;;chr16:54319010..54319041,-!p8@IRX3!0.52!2.31!IRX3;;chr2:96012397..96012417,+!p3@KCNIP3!0.52!2.31!KCNIP3;;chr4:57522598..57522664,-!p3@HOPX!0.52!2.31!HOPX;;chr1:8938736..8938756,-!p1@ENO1!0.51!3212.26!ENO1;;chr19:3366570..3366619,+!p1@NFIC!0.51!93.88!NFIC;;chr19:49865646..49865718,-!p1@TEAD2!0.51!24.69!TEAD2;;chr11:61520075..61520136,+!p1@C11orf9!0.51!5.66!C11orf9;;chrX:66763856..66763896,+!p1@AR!0.51!3.60!AR;;chr7:44143978..44143989,+!p2@AEBP1!0.50!4.63!AEBP1;;chrX:66763815..66763854,+!p2@AR!0.50!3.09!AR;;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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11536-120A6: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:21, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0